RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 KIF15Q9NS87 1388 aa13.43□□□□□ -0.26
TGFBR3-206ENST00000470600 FAM135AQ9P2D6 1515 aa13.42□□□□□ -0.26
TGFBR3-206ENST00000470600 PTPRMP28827 1452 aa13.42□□□□□ -0.26
TGFBR3-206ENST00000470600 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
TGFBR3-206ENST00000470600 CEP152O94986 1710 aa13.41□□□□□ -0.26
TGFBR3-206ENST00000470600 NAIPQ13075 1403 aa13.4□□□□□ -0.26
TGFBR3-206ENST00000470600 ABCC3O15438 1527 aa13.4□□□□□ -0.26
TGFBR3-206ENST00000470600 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
TGFBR3-206ENST00000470600 LMTK2Q8IWU2 1503 aa13.39□□□□□ -0.27
TGFBR3-206ENST00000470600 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
TGFBR3-206ENST00000470600 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
TGFBR3-206ENST00000470600 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
TGFBR3-206ENST00000470600 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
TGFBR3-206ENST00000470600 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
TGFBR3-206ENST00000470600 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
TGFBR3-206ENST00000470600 TSPY4P0CV99 314 aa13.35□□□□□ -0.27
TGFBR3-206ENST00000470600 TSPY10P0CW01 314 aa13.35□□□□□ -0.27
TGFBR3-206ENST00000470600 CHIC2Q9UKJ5 165 aa13.35□□□□□ -0.27
TGFBR3-206ENST00000470600 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
TGFBR3-206ENST00000470600 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
TGFBR3-206ENST00000470600 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
TGFBR3-206ENST00000470600 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
TGFBR3-206ENST00000470600 TET3O43151 1660 aa13.31□□□□□ -0.28
TGFBR3-206ENST00000470600 PZPP20742 1482 aa13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 KIF3BO15066 747 aa13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 E9PCH4 1651 aa13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 ZNF142P52746 1687 aaPredicted RBP13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 PREX1Q8TCU6 1659 aa13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
TGFBR3-206ENST00000470600 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
TGFBR3-206ENST00000470600 NPATQ14207 1427 aa13.29□□□□□ -0.28
TGFBR3-206ENST00000470600 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
TGFBR3-206ENST00000470600 SYNMO15061 1565 aa13.28□□□□□ -0.28
TGFBR3-206ENST00000470600 MLECQ14165 292 aa13.28□□□□□ -0.28
TGFBR3-206ENST00000470600 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
TGFBR3-206ENST00000470600 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
TGFBR3-206ENST00000470600 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
TGFBR3-206ENST00000470600 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
TGFBR3-206ENST00000470600 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
TGFBR3-206ENST00000470600 NOS1P29475 1434 aa13.25□□□□□ -0.29
TGFBR3-206ENST00000470600 ITGAEP38570 1179 aa13.24□□□□□ -0.29
TGFBR3-206ENST00000470600 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
TGFBR3-206ENST00000470600 GGT6Q6P531 493 aa13.24□□□□□ -0.29
TGFBR3-206ENST00000470600 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
TGFBR3-206ENST00000470600 SETD1BQ9UPS6 1966 aaKnown RBP13.23□□□□□ -0.29
TGFBR3-206ENST00000470600 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
TGFBR3-206ENST00000470600 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
TGFBR3-206ENST00000470600 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
TGFBR3-206ENST00000470600 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
TGFBR3-206ENST00000470600 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
TGFBR3-206ENST00000470600 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
TGFBR3-206ENST00000470600 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 PTPRTO14522 1441 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
TGFBR3-206ENST00000470600 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
TGFBR3-206ENST00000470600 FBXO31Q5XUX0 539 aaPredicted RBP13.18□□□□□ -0.3
TGFBR3-206ENST00000470600 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
TGFBR3-206ENST00000470600 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
TGFBR3-206ENST00000470600 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 TRPM2O94759 1503 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 NUP155O75694 1391 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 TNRQ92752 1358 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
TGFBR3-206ENST00000470600 TMEM131LA2VDJ0 1609 aa13.14□□□□□ -0.31
TGFBR3-206ENST00000470600 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
TGFBR3-206ENST00000470600 ARHGAP23Q9P227 1491 aa13.13□□□□□ -0.31
TGFBR3-206ENST00000470600 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
TGFBR3-206ENST00000470600 KANK1Q14678 1352 aa13.11□□□□□ -0.31
TGFBR3-206ENST00000470600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
TGFBR3-206ENST00000470600 SLIT1O75093 1534 aa13.11□□□□□ -0.31
TGFBR3-206ENST00000470600 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
TGFBR3-206ENST00000470600 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
TGFBR3-206ENST00000470600 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-206ENST00000470600 HRCP23327 699 aa13.09□□□□□ -0.31
TGFBR3-206ENST00000470600 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
TGFBR3-206ENST00000470600 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
TGFBR3-206ENST00000470600 HSPA2P54652 639 aa13.05□□□□□ -0.32
TGFBR3-206ENST00000470600 MED14O60244 1454 aa13.04□□□□□ -0.32
TGFBR3-206ENST00000470600 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
TGFBR3-206ENST00000470600 TRIM26Q12899 539 aaPredicted RBP13.04□□□□□ -0.32
TGFBR3-206ENST00000470600 IDI1Q13907 227 aa13.04□□□□□ -0.32
TGFBR3-206ENST00000470600 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
TGFBR3-206ENST00000470600 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
TGFBR3-206ENST00000470600 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
TGFBR3-206ENST00000470600 ANKRD30BQ9BXX2 1392 aa13.03□□□□□ -0.32
TGFBR3-206ENST00000470600 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.32
TGFBR3-206ENST00000470600 PKD2Q13563 968 aa13.02□□□□□ -0.33
TGFBR3-206ENST00000470600 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
TGFBR3-206ENST00000470600 PPLO60437 1756 aa13.01□□□□□ -0.33
TGFBR3-206ENST00000470600 KIF1BO60333 1816 aa13.01□□□□□ -0.33
TGFBR3-206ENST00000470600 STRCP1A6NGW2 1772 aa13□□□□□ -0.33
TGFBR3-206ENST00000470600 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
TGFBR3-206ENST00000470600 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
TGFBR3-206ENST00000470600 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
TGFBR3-206ENST00000470600 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
TGFBR3-206ENST00000470600 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms