RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 CCDC88BA6NC98 1476 aa8.78□□□□□ -1
RNF220-207ENST00000470498 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
RNF220-207ENST00000470498 ARSIQ5FYB1 569 aa8.76□□□□□ -1.01
RNF220-207ENST00000470498 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
RNF220-207ENST00000470498 BCANQ96GW7 911 aa8.76□□□□□ -1.01
RNF220-207ENST00000470498 EMILIN3Q9NT22 766 aa8.75□□□□□ -1.01
RNF220-207ENST00000470498 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
RNF220-207ENST00000470498 NBR1Q14596 966 aa8.74□□□□□ -1.01
RNF220-207ENST00000470498 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.011e-7■□□□□ 8.4
RNF220-207ENST00000470498 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
RNF220-207ENST00000470498 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
RNF220-207ENST00000470498 DPYSL4O14531 572 aa8.71□□□□□ -1.02
RNF220-207ENST00000470498 SLC34A2O95436 690 aa8.71□□□□□ -1.02
RNF220-207ENST00000470498 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
RNF220-207ENST00000470498 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
RNF220-207ENST00000470498 OXER1Q8TDS5 423 aa8.7□□□□□ -1.02
RNF220-207ENST00000470498 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
RNF220-207ENST00000470498 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
RNF220-207ENST00000470498 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
RNF220-207ENST00000470498 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
RNF220-207ENST00000470498 MAP3K9P80192 1104 aa8.68□□□□□ -1.02
RNF220-207ENST00000470498 HCSTQ9UBK5 93 aa8.67□□□□□ -1.02
RNF220-207ENST00000470498 PRDM2Q13029 1718 aa8.66□□□□□ -1.02
RNF220-207ENST00000470498 TBC1D12O60347 775 aa8.66□□□□□ -1.02
RNF220-207ENST00000470498 PDIA6Q15084 440 aa8.66□□□□□ -1.02
RNF220-207ENST00000470498 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
RNF220-207ENST00000470498 CYB5RLQ6IPT4 315 aa8.65□□□□□ -1.02
RNF220-207ENST00000470498 AQRO60306 1485 aaKnown RBP eCLIP8.64□□□□□ -1.03
RNF220-207ENST00000470498 PBX2P40425 430 aa8.64□□□□□ -1.03
RNF220-207ENST00000470498 AXIN2Q9Y2T1 843 aa8.64□□□□□ -1.03
RNF220-207ENST00000470498 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
RNF220-207ENST00000470498 SEMA3EO15041 775 aa8.63□□□□□ -1.03
RNF220-207ENST00000470498 DNMBPQ6XZF7 1577 aa8.62□□□□□ -1.03
RNF220-207ENST00000470498 EVI5O60447 810 aa8.62□□□□□ -1.03
RNF220-207ENST00000470498 SOGA1O94964 1423 aa8.62□□□□□ -1.03
RNF220-207ENST00000470498 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
RNF220-207ENST00000470498 RIMBP3CA6NJZ7 1639 aa8.6□□□□□ -1.03
RNF220-207ENST00000470498 RIMBP3BA6NNM3 1639 aa8.6□□□□□ -1.03
RNF220-207ENST00000470498 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
RNF220-207ENST00000470498 RIMBP3Q9UFD9 1639 aa8.6□□□□□ -1.03
RNF220-207ENST00000470498 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
RNF220-207ENST00000470498 NUDT7P0C024 238 aa8.59□□□□□ -1.03
RNF220-207ENST00000470498 ARHGEF11O15085 1522 aa8.59□□□□□ -1.03
RNF220-207ENST00000470498 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
RNF220-207ENST00000470498 CHMP7Q8WUX9 453 aaPredicted RBP8.58□□□□□ -1.04
RNF220-207ENST00000470498 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
RNF220-207ENST00000470498 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
RNF220-207ENST00000470498 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
RNF220-207ENST00000470498 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
RNF220-207ENST00000470498 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
RNF220-207ENST00000470498 LHX6Q9UPM6 363 aa8.57□□□□□ -1.04
RNF220-207ENST00000470498 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
RNF220-207ENST00000470498 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
RNF220-207ENST00000470498 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
RNF220-207ENST00000470498 GRXCR2A6NFK2 248 aa8.54□□□□□ -1.04
RNF220-207ENST00000470498 DDX12PQ92771 950 aa8.54□□□□□ -1.04
RNF220-207ENST00000470498 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
RNF220-207ENST00000470498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
RNF220-207ENST00000470498 CHD1O14646 1710 aa8.51□□□□□ -1.05
RNF220-207ENST00000470498 CUX1P39880 1505 aa8.51□□□□□ -1.05
RNF220-207ENST00000470498 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
RNF220-207ENST00000470498 HRO43593 1189 aa8.51□□□□□ -1.05
RNF220-207ENST00000470498 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
RNF220-207ENST00000470498 GRIN2BQ13224 1484 aa8.51□□□□□ -1.05
RNF220-207ENST00000470498 PHF14O94880 888 aa8.5□□□□□ -1.05
RNF220-207ENST00000470498 JPH4Q96JJ6 628 aa8.5□□□□□ -1.05
RNF220-207ENST00000470498 WDR97A6NE52 1622 aa8.5□□□□□ -1.05
RNF220-207ENST00000470498 ARAP1Q96P48 1450 aa8.5□□□□□ -1.05
RNF220-207ENST00000470498 MAGI1Q96QZ7 1491 aaPredicted RBP8.5□□□□□ -1.05
RNF220-207ENST00000470498 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
RNF220-207ENST00000470498 OSBPP22059 807 aa8.49□□□□□ -1.05
RNF220-207ENST00000470498 IRX2Q9BZI1 471 aaPredicted RBP8.49□□□□□ -1.05
RNF220-207ENST00000470498 FOSBP53539 338 aa8.48□□□□□ -1.05
RNF220-207ENST00000470498 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
RNF220-207ENST00000470498 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
RNF220-207ENST00000470498 EPAS1Q99814 870 aa8.48□□□□□ -1.05
RNF220-207ENST00000470498 PCDHGA10Q9Y5H3 936 aa8.48□□□□□ -1.05
RNF220-207ENST00000470498 SNAPC4Q5SXM2 1469 aa8.48□□□□□ -1.05
RNF220-207ENST00000470498 SYNJ2O15056 1496 aa8.47□□□□□ -1.05
RNF220-207ENST00000470498 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
RNF220-207ENST00000470498 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
RNF220-207ENST00000470498 ZNF454Q8N9F8 522 aa8.47□□□□□ -1.05
RNF220-207ENST00000470498 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.06
RNF220-207ENST00000470498 TYW1BQ6NUM6 668 aa8.46□□□□□ -1.06
RNF220-207ENST00000470498 CLASP1Q7Z460 1538 aa8.45□□□□□ -1.06
RNF220-207ENST00000470498 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
RNF220-207ENST00000470498 TK2O00142 265 aa8.45□□□□□ -1.06
RNF220-207ENST00000470498 RGS20O76081 388 aa8.45□□□□□ -1.06
RNF220-207ENST00000470498 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
RNF220-207ENST00000470498 EN1Q05925 392 aaPredicted RBP8.45□□□□□ -1.06
RNF220-207ENST00000470498 FBXW7Q969H0 707 aa8.45□□□□□ -1.06
RNF220-207ENST00000470498 SYNJ1O43426 1573 aa8.44□□□□□ -1.06
RNF220-207ENST00000470498 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
RNF220-207ENST00000470498 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
RNF220-207ENST00000470498 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
RNF220-207ENST00000470498 MAP3K7O43318 606 aa8.43□□□□□ -1.06
RNF220-207ENST00000470498 PSEN2P49810 448 aa8.43□□□□□ -1.06
RNF220-207ENST00000470498 TPRNQ4KMQ1 711 aa8.43□□□□□ -1.06
RNF220-207ENST00000470498 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
RNF220-207ENST00000470498 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms