RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
HDLBP-232ENST00000470482 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
HDLBP-232ENST00000470482 RNF17Q9BXT8 1623 aaKnown RBP18.44■□□□□ 0.54
HDLBP-232ENST00000470482 PZPP20742 1482 aa18.44■□□□□ 0.54
HDLBP-232ENST00000470482 MROH1Q8NDA8 1641 aa18.43■□□□□ 0.54
HDLBP-232ENST00000470482 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
HDLBP-232ENST00000470482 ZNF142P52746 1687 aaPredicted RBP18.43■□□□□ 0.54
HDLBP-232ENST00000470482 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
HDLBP-232ENST00000470482 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
HDLBP-232ENST00000470482 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
HDLBP-232ENST00000470482 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
HDLBP-232ENST00000470482 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
HDLBP-232ENST00000470482 APLP2Q06481 763 aa18.4■□□□□ 0.54
HDLBP-232ENST00000470482 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
HDLBP-232ENST00000470482 A2ML1A8K2U0 1454 aa18.39■□□□□ 0.54
HDLBP-232ENST00000470482 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-232ENST00000470482 EIF2AK4Q9P2K8 1649 aaKnown RBP18.39■□□□□ 0.53
HDLBP-232ENST00000470482 DAPK1P53355 1430 aa18.39■□□□□ 0.53
HDLBP-232ENST00000470482 ABCC3O15438 1527 aa18.39■□□□□ 0.53
HDLBP-232ENST00000470482 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
HDLBP-232ENST00000470482 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
HDLBP-232ENST00000470482 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
HDLBP-232ENST00000470482 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
HDLBP-232ENST00000470482 TNRQ92752 1358 aa18.37■□□□□ 0.53
HDLBP-232ENST00000470482 CROCC2H7BZ55 1655 aa18.36■□□□□ 0.53
HDLBP-232ENST00000470482 PKD2Q13563 968 aa18.36■□□□□ 0.53
HDLBP-232ENST00000470482 KIF15Q9NS87 1388 aa18.36■□□□□ 0.53
HDLBP-232ENST00000470482 ERBINQ96RT1 1412 aa18.33■□□□□ 0.53
HDLBP-232ENST00000470482 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
HDLBP-232ENST00000470482 SPATA31D1Q6ZQQ2 1576 aa18.32■□□□□ 0.52
HDLBP-232ENST00000470482 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
HDLBP-232ENST00000470482 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
HDLBP-232ENST00000470482 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
HDLBP-232ENST00000470482 NLRP1Q9C000 1473 aa18.31■□□□□ 0.52
HDLBP-232ENST00000470482 ZC3H13Q5T200 1668 aaKnown RBP18.3■□□□□ 0.52
HDLBP-232ENST00000470482 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
HDLBP-232ENST00000470482 ERVK-7P63135 1459 aa18.29■□□□□ 0.52
HDLBP-232ENST00000470482 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
HDLBP-232ENST00000470482 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
HDLBP-232ENST00000470482 NEURL4Q96JN8 1562 aa18.27■□□□□ 0.52
HDLBP-232ENST00000470482 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
HDLBP-232ENST00000470482 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
HDLBP-232ENST00000470482 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
HDLBP-232ENST00000470482 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-232ENST00000470482 MED14O60244 1454 aa18.25■□□□□ 0.51
HDLBP-232ENST00000470482 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
HDLBP-232ENST00000470482 CEP152O94986 1710 aa18.23■□□□□ 0.51
HDLBP-232ENST00000470482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.23■□□□□ 0.51
HDLBP-232ENST00000470482 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
HDLBP-232ENST00000470482 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
HDLBP-232ENST00000470482 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
HDLBP-232ENST00000470482 FAM50AQ14320 339 aaKnown RBP18.18■□□□□ 0.5
HDLBP-232ENST00000470482 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
HDLBP-232ENST00000470482 NOS1P29475 1434 aa18.17■□□□□ 0.5
HDLBP-232ENST00000470482 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
HDLBP-232ENST00000470482 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
HDLBP-232ENST00000470482 POLR1AO95602 1720 aaPredicted RBP18.17■□□□□ 0.5
HDLBP-232ENST00000470482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.16■□□□□ 0.52e-10■■□□□ 13.2
HDLBP-232ENST00000470482 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
HDLBP-232ENST00000470482 SLIT1O75093 1534 aa18.15■□□□□ 0.5
HDLBP-232ENST00000470482 LTKP29376 864 aa18.15■□□□□ 0.5
HDLBP-232ENST00000470482 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
HDLBP-232ENST00000470482 IDI1Q13907 227 aa18.14■□□□□ 0.49
HDLBP-232ENST00000470482 KANK1Q14678 1352 aa18.14■□□□□ 0.49
HDLBP-232ENST00000470482 EFCAB6Q5THR3 1501 aa18.12■□□□□ 0.49
HDLBP-232ENST00000470482 SYNMO15061 1565 aa18.12■□□□□ 0.49
HDLBP-232ENST00000470482 KDM5AP29375 1690 aaKnown RBP18.09■□□□□ 0.49
HDLBP-232ENST00000470482 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
HDLBP-232ENST00000470482 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
HDLBP-232ENST00000470482 CPS1P31327 1500 aa18.08■□□□□ 0.49
HDLBP-232ENST00000470482 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
HDLBP-232ENST00000470482 PIK3C2BO00750 1634 aa18.08■□□□□ 0.48
HDLBP-232ENST00000470482 UNC13BO14795 1591 aa18.08■□□□□ 0.48
HDLBP-232ENST00000470482 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
HDLBP-232ENST00000470482 RRBP1Q9P2E9 1410 aaKnown RBP18.07■□□□□ 0.48
HDLBP-232ENST00000470482 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
HDLBP-232ENST00000470482 SLC52A1Q9NWF4 448 aa18.06■□□□□ 0.48
HDLBP-232ENST00000470482 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
HDLBP-232ENST00000470482 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
HDLBP-232ENST00000470482 TET3O43151 1660 aa18.04■□□□□ 0.48
HDLBP-232ENST00000470482 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
HDLBP-232ENST00000470482 LRRC7Q96NW7 1537 aa18.01■□□□□ 0.47
HDLBP-232ENST00000470482 UBAP1LF5GYI3 381 aa18■□□□□ 0.47
HDLBP-232ENST00000470482 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
HDLBP-232ENST00000470482 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
HDLBP-232ENST00000470482 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
HDLBP-232ENST00000470482 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
HDLBP-232ENST00000470482 E9PCH4 1651 aa17.98■□□□□ 0.47
HDLBP-232ENST00000470482 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
HDLBP-232ENST00000470482 NUP155O75694 1391 aa17.96■□□□□ 0.47
HDLBP-232ENST00000470482 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
HDLBP-232ENST00000470482 NAIPQ13075 1403 aa17.95■□□□□ 0.46
HDLBP-232ENST00000470482 ITGAEP38570 1179 aa17.94■□□□□ 0.46
HDLBP-232ENST00000470482 TOM1O60784 492 aa17.92■□□□□ 0.46
HDLBP-232ENST00000470482 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
HDLBP-232ENST00000470482 KCNA6P17658 529 aa17.91■□□□□ 0.46
HDLBP-232ENST00000470482 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
HDLBP-232ENST00000470482 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
HDLBP-232ENST00000470482 PLEKHG1Q9ULL1 1385 aa17.9■□□□□ 0.46
HDLBP-232ENST00000470482 RIMS2Q9UQ26 1411 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms