RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
NHLRC3-203ENST00000470258 RPRD2Q5VT52 1461 aaKnown RBP12.39□□□□□ -0.43
NHLRC3-203ENST00000470258 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
NHLRC3-203ENST00000470258 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
NHLRC3-203ENST00000470258 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
NHLRC3-203ENST00000470258 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
NHLRC3-203ENST00000470258 HECW1Q76N89 1606 aa12.38□□□□□ -0.43
NHLRC3-203ENST00000470258 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
NHLRC3-203ENST00000470258 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
NHLRC3-203ENST00000470258 TEX14Q8IWB6 1497 aa12.37□□□□□ -0.43
NHLRC3-203ENST00000470258 RALBP1Q15311 655 aa12.37□□□□□ -0.43
NHLRC3-203ENST00000470258 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
NHLRC3-203ENST00000470258 FBLN2P98095 1184 aa12.37□□□□□ -0.43
NHLRC3-203ENST00000470258 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
NHLRC3-203ENST00000470258 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
NHLRC3-203ENST00000470258 CC2D1BQ5T0F9 858 aaKnown RBP12.36□□□□□ -0.43
NHLRC3-203ENST00000470258 NLRP13Q86W25 1043 aa12.36□□□□□ -0.43
NHLRC3-203ENST00000470258 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
NHLRC3-203ENST00000470258 EFCAB5A4FU69 1503 aa12.34□□□□□ -0.43
NHLRC3-203ENST00000470258 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
NHLRC3-203ENST00000470258 BCORL1Q5H9F3 1711 aa12.34□□□□□ -0.43
NHLRC3-203ENST00000470258 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
NHLRC3-203ENST00000470258 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
NHLRC3-203ENST00000470258 ROCK2O75116 1388 aaKnown RBP12.33□□□□□ -0.44
NHLRC3-203ENST00000470258 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
NHLRC3-203ENST00000470258 SUPT6HQ7KZ85 1726 aaKnown RBP12.33□□□□□ -0.44
NHLRC3-203ENST00000470258 BECN1Q14457 450 aa12.33□□□□□ -0.44
NHLRC3-203ENST00000470258 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
NHLRC3-203ENST00000470258 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
NHLRC3-203ENST00000470258 XRCC6P12956 609 aaKnown RBP eCLIP12.31□□□□□ -0.44
NHLRC3-203ENST00000470258 RRP9O43818 475 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-203ENST00000470258 POLR1AO95602 1720 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-203ENST00000470258 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
NHLRC3-203ENST00000470258 PKD2Q13563 968 aa12.29□□□□□ -0.44
NHLRC3-203ENST00000470258 ZNF644Q9H582 1327 aaPredicted RBP12.29□□□□□ -0.44
NHLRC3-203ENST00000470258 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
NHLRC3-203ENST00000470258 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
NHLRC3-203ENST00000470258 SEC24BO95487 1268 aa12.28□□□□□ -0.44
NHLRC3-203ENST00000470258 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
NHLRC3-203ENST00000470258 CLCN1P35523 988 aa12.27□□□□□ -0.45
NHLRC3-203ENST00000470258 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
NHLRC3-203ENST00000470258 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
NHLRC3-203ENST00000470258 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
NHLRC3-203ENST00000470258 ZNF777Q9ULD5 760 aaPredicted RBP12.24□□□□□ -0.45
NHLRC3-203ENST00000470258 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
NHLRC3-203ENST00000470258 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
NHLRC3-203ENST00000470258 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
NHLRC3-203ENST00000470258 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
NHLRC3-203ENST00000470258 DISP1Q96F81 1524 aa12.23□□□□□ -0.45
NHLRC3-203ENST00000470258 PRG4Q92954 1404 aaPredicted RBP12.23□□□□□ -0.45
NHLRC3-203ENST00000470258 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
NHLRC3-203ENST00000470258 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 WDR43Q15061 677 aaKnown RBP eCLIP12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 USP19O94966 1318 aa12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
NHLRC3-203ENST00000470258 KDM5CP41229 1560 aa12.21□□□□□ -0.45
NHLRC3-203ENST00000470258 IGHDP01880 384 aa12.21□□□□□ -0.45
NHLRC3-203ENST00000470258 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.46
NHLRC3-203ENST00000470258 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.46
NHLRC3-203ENST00000470258 DAPK1P53355 1430 aa12.2□□□□□ -0.46
NHLRC3-203ENST00000470258 ESPNB1AK53 854 aa12.2□□□□□ -0.46
NHLRC3-203ENST00000470258 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
NHLRC3-203ENST00000470258 BCAR3O75815 825 aa12.2□□□□□ -0.46
NHLRC3-203ENST00000470258 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
NHLRC3-203ENST00000470258 MCM4P33991 863 aa12.19□□□□□ -0.46
NHLRC3-203ENST00000470258 TRAK2O60296 914 aa12.19□□□□□ -0.46
NHLRC3-203ENST00000470258 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
NHLRC3-203ENST00000470258 PANK3Q9H999 370 aa12.19□□□□□ -0.46
NHLRC3-203ENST00000470258 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
NHLRC3-203ENST00000470258 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
NHLRC3-203ENST00000470258 ANTXR1Q9H6X2 564 aa12.18□□□□□ -0.46
NHLRC3-203ENST00000470258 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
NHLRC3-203ENST00000470258 ABCC5O15440 1437 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 MRE11P49959 708 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 ARID3AQ99856 593 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
NHLRC3-203ENST00000470258 KIF14Q15058 1648 aa12.16□□□□□ -0.46
NHLRC3-203ENST00000470258 GRPEL1Q9HAV7 217 aa12.16□□□□□ -0.46
NHLRC3-203ENST00000470258 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
NHLRC3-203ENST00000470258 PZPP20742 1482 aa12.16□□□□□ -0.46
NHLRC3-203ENST00000470258 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
NHLRC3-203ENST00000470258 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
NHLRC3-203ENST00000470258 ROCK1Q13464 1354 aa12.15□□□□□ -0.46
NHLRC3-203ENST00000470258 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.46
NHLRC3-203ENST00000470258 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.46
NHLRC3-203ENST00000470258 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
NHLRC3-203ENST00000470258 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.47
NHLRC3-203ENST00000470258 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.47
NHLRC3-203ENST00000470258 RALGAPBQ86X10 1494 aa12.15□□□□□ -0.47
NHLRC3-203ENST00000470258 RBM10P98175 930 aaKnown RBP12.14□□□□□ -0.47
NHLRC3-203ENST00000470258 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
NHLRC3-203ENST00000470258 NUP155O75694 1391 aa12.13□□□□□ -0.47
NHLRC3-203ENST00000470258 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
NHLRC3-203ENST00000470258 KIAA1211Q6ZU35 1233 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms