RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 CARD11Q9BXL7 1154 aa27.62■■■□□ 2.01
CDHR3-207ENST00000470188 DCAF11Q8TEB1 546 aa27.62■■■□□ 2.01
CDHR3-207ENST00000470188 KDM2AQ9Y2K7 1162 aa27.62■■■□□ 2.01
CDHR3-207ENST00000470188 MRS2Q9HD23 443 aa27.6■■■□□ 2.01
CDHR3-207ENST00000470188 CCDC144AA2RUR9 1427 aa27.59■■■□□ 2.01
CDHR3-207ENST00000470188 DUOX2Q9NRD8 1548 aa27.58■■■□□ 2.01
CDHR3-207ENST00000470188 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2
CDHR3-207ENST00000470188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 22e-8■□□□□ 11
CDHR3-207ENST00000470188 POLR3GLQ9BT43 218 aa27.57■■■□□ 2
CDHR3-207ENST00000470188 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
CDHR3-207ENST00000470188 BCL11AQ9H165 835 aa27.55■■■□□ 2
CDHR3-207ENST00000470188 IQGAP3Q86VI3 1631 aa27.55■■■□□ 2
CDHR3-207ENST00000470188 ABCC1P33527 1531 aa27.53■■■□□ 2
CDHR3-207ENST00000470188 FAM9BQ8IZU0 186 aa27.53■■■□□ 2
CDHR3-207ENST00000470188 ERBINQ96RT1 1412 aa27.53■■■□□ 2
CDHR3-207ENST00000470188 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
CDHR3-207ENST00000470188 PLA2R1Q13018 1463 aa27.52■■■□□ 2
CDHR3-207ENST00000470188 MAGI2Q86UL8 1455 aa27.49■■□□□ 1.99
CDHR3-207ENST00000470188 ST20-MTHFSA0A0A6YYL1 179 aa27.48■■□□□ 1.99
CDHR3-207ENST00000470188 PRAG1Q86YV5 1406 aa27.48■■□□□ 1.99
CDHR3-207ENST00000470188 TRAPPC8Q9Y2L5 1435 aa27.47■■□□□ 1.99
CDHR3-207ENST00000470188 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
CDHR3-207ENST00000470188 TRPM1Q7Z4N2 1603 aa27.44■■□□□ 1.98
CDHR3-207ENST00000470188 ARAP3Q8WWN8 1544 aa27.44■■□□□ 1.98
CDHR3-207ENST00000470188 A2MP01023 1474 aa27.43■■□□□ 1.98
CDHR3-207ENST00000470188 ZBED9Q6R2W3 1325 aa27.42■■□□□ 1.98
CDHR3-207ENST00000470188 ATP10AO60312 1499 aa27.42■■□□□ 1.98
CDHR3-207ENST00000470188 CNGB1Q14028 1251 aaPredicted RBP27.39■■□□□ 1.98
CDHR3-207ENST00000470188 SPAG9O60271 1321 aaKnown RBP27.39■■□□□ 1.98
CDHR3-207ENST00000470188 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
CDHR3-207ENST00000470188 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
CDHR3-207ENST00000470188 RTEL1-TNFRSF6BF6WH68 1400 aa27.37■■□□□ 1.97
CDHR3-207ENST00000470188 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
CDHR3-207ENST00000470188 ZFYVE16Q7Z3T8 1539 aa27.35■■□□□ 1.97
CDHR3-207ENST00000470188 AFAP1Q8N556 730 aa27.34■■□□□ 1.97
CDHR3-207ENST00000470188 NBPF1Q3BBV0 1214 aa27.33■■□□□ 1.97
CDHR3-207ENST00000470188 ERICH6BQ5W0A0 696 aa27.33■■□□□ 1.97
CDHR3-207ENST00000470188 LAMC1P11047 1609 aa27.32■■□□□ 1.96
CDHR3-207ENST00000470188 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
CDHR3-207ENST00000470188 E9PCH4 1651 aa27.3■■□□□ 1.96
CDHR3-207ENST00000470188 FANCAO15360 1455 aa27.29■■□□□ 1.96
CDHR3-207ENST00000470188 PRDM15P57071 1507 aaPredicted RBP27.28■■□□□ 1.96
CDHR3-207ENST00000470188 ABCA9Q8IUA7 1624 aa27.28■■□□□ 1.96
CDHR3-207ENST00000470188 MSH5O43196 834 aa27.28■■□□□ 1.96
CDHR3-207ENST00000470188 KTN1Q86UP2 1357 aaKnown RBP27.27■■□□□ 1.96
CDHR3-207ENST00000470188 IRX6P78412 446 aaPredicted RBP27.26■■□□□ 1.96
CDHR3-207ENST00000470188 TMC1Q8TDI8 760 aa27.24■■□□□ 1.95
CDHR3-207ENST00000470188 ATP7AQ04656 1500 aa27.23■■□□□ 1.95
CDHR3-207ENST00000470188 RALBP1Q15311 655 aa27.23■■□□□ 1.95
CDHR3-207ENST00000470188 INO80Q9ULG1 1556 aaPredicted RBP27.22■■□□□ 1.95
CDHR3-207ENST00000470188 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
CDHR3-207ENST00000470188 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
CDHR3-207ENST00000470188 DEPDC5O75140 1603 aa27.22■■□□□ 1.95
CDHR3-207ENST00000470188 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
CDHR3-207ENST00000470188 PNISRQ8TF01 805 aaKnown RBP27.22■■□□□ 1.95
CDHR3-207ENST00000470188 COL17A1Q9UMD9 1497 aaPredicted RBP27.22■■□□□ 1.95
CDHR3-207ENST00000470188 MYBBP1AQ9BQG0 1328 aaKnown RBP27.21■■□□□ 1.95
CDHR3-207ENST00000470188 TRPM2O94759 1503 aa27.21■■□□□ 1.95
CDHR3-207ENST00000470188 ADGRL1O94910 1474 aa27.2■■□□□ 1.94
CDHR3-207ENST00000470188 ASXL2Q76L83 1435 aa27.19■■□□□ 1.94
CDHR3-207ENST00000470188 TESK2Q96S53 571 aa27.19■■□□□ 1.94
CDHR3-207ENST00000470188 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
CDHR3-207ENST00000470188 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
CDHR3-207ENST00000470188 PTPRTO14522 1441 aa27.17■■□□□ 1.94
CDHR3-207ENST00000470188 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
CDHR3-207ENST00000470188 KANK1Q14678 1352 aa27.16■■□□□ 1.94
CDHR3-207ENST00000470188 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
CDHR3-207ENST00000470188 TET3O43151 1660 aa27.16■■□□□ 1.94
CDHR3-207ENST00000470188 SPHKAPQ2M3C7 1700 aa27.15■■□□□ 1.94
CDHR3-207ENST00000470188 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
CDHR3-207ENST00000470188 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
CDHR3-207ENST00000470188 CYB5RLQ6IPT4 315 aa27.14■■□□□ 1.94
CDHR3-207ENST00000470188 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
CDHR3-207ENST00000470188 VWDEQ8N2E2 1590 aa27.13■■□□□ 1.93
CDHR3-207ENST00000470188 ERICH6Q7L0X2 663 aa27.12■■□□□ 1.93
CDHR3-207ENST00000470188 PPP4R2Q9NY27 417 aa27.12■■□□□ 1.93
CDHR3-207ENST00000470188 CEP152O94986 1710 aa27.12■■□□□ 1.93
CDHR3-207ENST00000470188 LRPPRCP42704 1394 aaKnown RBP27.12■■□□□ 1.93
CDHR3-207ENST00000470188 TMF1P82094 1093 aa27.12■■□□□ 1.93
CDHR3-207ENST00000470188 PARD3Q8TEW0 1356 aa27.11■■□□□ 1.93
CDHR3-207ENST00000470188 KIF3BO15066 747 aa27.11■■□□□ 1.93
CDHR3-207ENST00000470188 CLTCL1P53675 1640 aa27.11■■□□□ 1.93
CDHR3-207ENST00000470188 PER1O15534 1290 aaPredicted RBP27.1■■□□□ 1.93
CDHR3-207ENST00000470188 NPM1P06748 294 aaKnown RBP eCLIP27.09■■□□□ 1.93
CDHR3-207ENST00000470188 STAC3Q96MF2 364 aa27.09■■□□□ 1.93
CDHR3-207ENST00000470188 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
CDHR3-207ENST00000470188 NLRP13Q86W25 1043 aa27.08■■□□□ 1.93
CDHR3-207ENST00000470188 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
CDHR3-207ENST00000470188 MROH1Q8NDA8 1641 aa27.04■■□□□ 1.92
CDHR3-207ENST00000470188 PANK3Q9H999 370 aa27.03■■□□□ 1.92
CDHR3-207ENST00000470188 IQGAP1P46940 1657 aa27.03■■□□□ 1.92
CDHR3-207ENST00000470188 ZNF518AQ6AHZ1 1483 aa27■■□□□ 1.91
CDHR3-207ENST00000470188 KIDINS220Q9ULH0 1771 aa27■■□□□ 1.91
CDHR3-207ENST00000470188 SENP3-EIF4A1A0A087X0R7 540 aa26.99■■□□□ 1.91
CDHR3-207ENST00000470188 SCAF11Q99590 1463 aaKnown RBP26.99■■□□□ 1.91
CDHR3-207ENST00000470188 NEURL4Q96JN8 1562 aa26.99■■□□□ 1.91
CDHR3-207ENST00000470188 CC2D1BQ5T0F9 858 aaKnown RBP26.98■■□□□ 1.91
CDHR3-207ENST00000470188 EFCAB6Q5THR3 1501 aa26.96■■□□□ 1.91
CDHR3-207ENST00000470188 RNF123Q5XPI4 1314 aa26.94■■□□□ 1.9
CDHR3-207ENST00000470188 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms