RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.35
PGAP1-208ENST00000470179 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
PGAP1-208ENST00000470179 NAIPQ13075 1403 aa23.45■■□□□ 1.34
PGAP1-208ENST00000470179 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
PGAP1-208ENST00000470179 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
PGAP1-208ENST00000470179 HECW2Q9P2P5 1572 aa23.43■■□□□ 1.34
PGAP1-208ENST00000470179 KIDINS220Q9ULH0 1771 aa23.42■■□□□ 1.34
PGAP1-208ENST00000470179 SPAG9O60271 1321 aaKnown RBP23.42■■□□□ 1.34
PGAP1-208ENST00000470179 COL17A1Q9UMD9 1497 aaPredicted RBP23.41■■□□□ 1.34
PGAP1-208ENST00000470179 MAGI2Q86UL8 1455 aa23.41■■□□□ 1.34
PGAP1-208ENST00000470179 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
PGAP1-208ENST00000470179 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
PGAP1-208ENST00000470179 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
PGAP1-208ENST00000470179 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
PGAP1-208ENST00000470179 KIF15Q9NS87 1388 aa23.36■■□□□ 1.33
PGAP1-208ENST00000470179 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
PGAP1-208ENST00000470179 ABCA6Q8N139 1617 aa23.32■■□□□ 1.32
PGAP1-208ENST00000470179 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
PGAP1-208ENST00000470179 KDM6BO15054 1643 aa23.31■■□□□ 1.32
PGAP1-208ENST00000470179 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
PGAP1-208ENST00000470179 DIP2CQ9Y2E4 1556 aa23.31■■□□□ 1.32
PGAP1-208ENST00000470179 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
PGAP1-208ENST00000470179 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
PGAP1-208ENST00000470179 DHX29Q7Z478 1369 aaKnown RBP23.28■■□□□ 1.32
PGAP1-208ENST00000470179 TONSLQ96HA7 1378 aa23.28■■□□□ 1.32
PGAP1-208ENST00000470179 FOXD1Q16676 465 aa23.28■■□□□ 1.32
PGAP1-208ENST00000470179 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
PGAP1-208ENST00000470179 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
PGAP1-208ENST00000470179 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
PGAP1-208ENST00000470179 A2MP01023 1474 aa23.25■■□□□ 1.31
PGAP1-208ENST00000470179 YEATS2Q9ULM3 1422 aa23.24■■□□□ 1.31
PGAP1-208ENST00000470179 B4GALNT3Q6L9W6 998 aa23.24■■□□□ 1.31
PGAP1-208ENST00000470179 ATP10AO60312 1499 aa23.23■■□□□ 1.31
PGAP1-208ENST00000470179 UNC13BO14795 1591 aa23.21■■□□□ 1.31
PGAP1-208ENST00000470179 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
PGAP1-208ENST00000470179 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
PGAP1-208ENST00000470179 KDM5DQ9BY66 1539 aa23.2■■□□□ 1.3
PGAP1-208ENST00000470179 AGLP35573 1532 aa23.19■■□□□ 1.3
PGAP1-208ENST00000470179 RNF17Q9BXT8 1623 aaKnown RBP23.17■■□□□ 1.3
PGAP1-208ENST00000470179 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
PGAP1-208ENST00000470179 C11orf95C9JLR9 678 aaPredicted RBP23.16■■□□□ 1.3
PGAP1-208ENST00000470179 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
PGAP1-208ENST00000470179 HSPA5P11021 654 aaKnown RBP23.15■■□□□ 1.3
PGAP1-208ENST00000470179 ERICH6Q7L0X2 663 aa23.15■■□□□ 1.3
PGAP1-208ENST00000470179 MROH1Q8NDA8 1641 aa23.13■■□□□ 1.29
PGAP1-208ENST00000470179 PRDM15P57071 1507 aaPredicted RBP23.13■■□□□ 1.29
PGAP1-208ENST00000470179 VWDEQ8N2E2 1590 aa23.12■■□□□ 1.29
PGAP1-208ENST00000470179 POLR3GLQ9BT43 218 aa23.11■■□□□ 1.29
PGAP1-208ENST00000470179 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
PGAP1-208ENST00000470179 NBR1Q14596 966 aa23.09■■□□□ 1.29
PGAP1-208ENST00000470179 PZPP20742 1482 aa23.09■■□□□ 1.29
PGAP1-208ENST00000470179 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
PGAP1-208ENST00000470179 FAM135AQ9P2D6 1515 aa23.07■■□□□ 1.28
PGAP1-208ENST00000470179 KIF3BO15066 747 aa23.06■■□□□ 1.28
PGAP1-208ENST00000470179 NUP155O75694 1391 aa23.05■■□□□ 1.28
PGAP1-208ENST00000470179 LMTK2Q8IWU2 1503 aa23.05■■□□□ 1.28
PGAP1-208ENST00000470179 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
PGAP1-208ENST00000470179 MPHOSPH9Q99550 1183 aa23.01■■□□□ 1.27
PGAP1-208ENST00000470179 ZC3H13Q5T200 1668 aaKnown RBP23.01■■□□□ 1.27
PGAP1-208ENST00000470179 MRS2Q9HD23 443 aa23■■□□□ 1.27
PGAP1-208ENST00000470179 KANK1Q14678 1352 aa23■■□□□ 1.27
PGAP1-208ENST00000470179 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
PGAP1-208ENST00000470179 TET3O43151 1660 aa22.99■■□□□ 1.27
PGAP1-208ENST00000470179 ABCC3O15438 1527 aa22.95■■□□□ 1.27
PGAP1-208ENST00000470179 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.27
PGAP1-208ENST00000470179 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
PGAP1-208ENST00000470179 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
PGAP1-208ENST00000470179 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
PGAP1-208ENST00000470179 CEP152O94986 1710 aa22.93■■□□□ 1.26
PGAP1-208ENST00000470179 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
PGAP1-208ENST00000470179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.265e-7■□□□□ 9.5
PGAP1-208ENST00000470179 GGT6Q6P531 493 aa22.91■■□□□ 1.26
PGAP1-208ENST00000470179 ARHGAP31Q2M1Z3 1444 aa22.91■■□□□ 1.26
PGAP1-208ENST00000470179 FANCIQ9NVI1 1328 aa22.9■■□□□ 1.26
PGAP1-208ENST00000470179 E9PCH4 1651 aa22.9■■□□□ 1.26
PGAP1-208ENST00000470179 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
PGAP1-208ENST00000470179 CAMSAP1Q5T5Y3 1602 aa22.89■■□□□ 1.26
PGAP1-208ENST00000470179 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.25
PGAP1-208ENST00000470179 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.25
PGAP1-208ENST00000470179 DEKP35659 375 aaKnown RBP22.88■■□□□ 1.25
PGAP1-208ENST00000470179 PKD2Q13563 968 aa22.88■■□□□ 1.25
PGAP1-208ENST00000470179 NBPF8Q3BBV2 869 aa22.88■■□□□ 1.25
PGAP1-208ENST00000470179 PRKRIP1Q9H875 184 aaPredicted RBP22.88■■□□□ 1.25
PGAP1-208ENST00000470179 ANKRD30BQ9BXX2 1392 aa22.88■■□□□ 1.25
PGAP1-208ENST00000470179 WASHC2CQ9Y4E1 1318 aa22.86■■□□□ 1.25
PGAP1-208ENST00000470179 SALL2Q9Y467 1007 aaPredicted RBP22.85■■□□□ 1.25
PGAP1-208ENST00000470179 MROH2AA6NES4 1674 aa22.85■■□□□ 1.25
PGAP1-208ENST00000470179 PTPRTO14522 1441 aa22.85■■□□□ 1.25
PGAP1-208ENST00000470179 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
PGAP1-208ENST00000470179 CLTCQ00610 1675 aaKnown RBP22.83■■□□□ 1.24
PGAP1-208ENST00000470179 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
PGAP1-208ENST00000470179 NPATQ14207 1427 aa22.82■■□□□ 1.24
PGAP1-208ENST00000470179 PLA2R1Q13018 1463 aa22.81■■□□□ 1.24
PGAP1-208ENST00000470179 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
PGAP1-208ENST00000470179 ADAMTSL3P82987 1691 aa22.8■■□□□ 1.24
PGAP1-208ENST00000470179 TRPM2O94759 1503 aa22.79■■□□□ 1.24
PGAP1-208ENST00000470179 NOS1P29475 1434 aa22.77■■□□□ 1.24
PGAP1-208ENST00000470179 FER1L4A9Z1Z3 1794 aa22.77■■□□□ 1.24
PGAP1-208ENST00000470179 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
PGAP1-208ENST00000470179 MLECQ14165 292 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms