RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 KIF3BO15066 747 aa13□□□□□ -0.33
SSBP1-208ENST00000469123 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
SSBP1-208ENST00000469123 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
SSBP1-208ENST00000469123 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
SSBP1-208ENST00000469123 GGT6Q6P531 493 aa12.98□□□□□ -0.33
SSBP1-208ENST00000469123 ANKRD50Q9ULJ7 1429 aa12.97□□□□□ -0.33
SSBP1-208ENST00000469123 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
SSBP1-208ENST00000469123 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
SSBP1-208ENST00000469123 DEPDC5O75140 1603 aa12.96□□□□□ -0.33
SSBP1-208ENST00000469123 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
SSBP1-208ENST00000469123 KANK1Q14678 1352 aa12.95□□□□□ -0.34
SSBP1-208ENST00000469123 C3P01024 1663 aa12.95□□□□□ -0.34
SSBP1-208ENST00000469123 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
SSBP1-208ENST00000469123 NPATQ14207 1427 aa12.95□□□□□ -0.34
SSBP1-208ENST00000469123 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
SSBP1-208ENST00000469123 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
SSBP1-208ENST00000469123 MROH1Q8NDA8 1641 aa12.93□□□□□ -0.34
SSBP1-208ENST00000469123 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
SSBP1-208ENST00000469123 ABCC3O15438 1527 aa12.92□□□□□ -0.34
SSBP1-208ENST00000469123 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 HFM1A2PYH4 1435 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 ITGAEP38570 1179 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 LMTK2Q8IWU2 1503 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 PZPP20742 1482 aa12.91□□□□□ -0.34
SSBP1-208ENST00000469123 PREX1Q8TCU6 1659 aa12.9□□□□□ -0.34
SSBP1-208ENST00000469123 ARHGAP31Q2M1Z3 1444 aa12.9□□□□□ -0.34
SSBP1-208ENST00000469123 UNC13BO14795 1591 aa12.9□□□□□ -0.35
SSBP1-208ENST00000469123 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
SSBP1-208ENST00000469123 CEP152O94986 1710 aa12.88□□□□□ -0.35
SSBP1-208ENST00000469123 NAIPQ13075 1403 aa12.88□□□□□ -0.35
SSBP1-208ENST00000469123 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
SSBP1-208ENST00000469123 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
SSBP1-208ENST00000469123 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-208ENST00000469123 TET3O43151 1660 aa12.85□□□□□ -0.35
SSBP1-208ENST00000469123 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
SSBP1-208ENST00000469123 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
SSBP1-208ENST00000469123 EFCAB6Q5THR3 1501 aa12.84□□□□□ -0.35
SSBP1-208ENST00000469123 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-208ENST00000469123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.355e-6■□□□□ 8.4
SSBP1-208ENST00000469123 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
SSBP1-208ENST00000469123 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
SSBP1-208ENST00000469123 TNRQ92752 1358 aa12.83□□□□□ -0.36
SSBP1-208ENST00000469123 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
SSBP1-208ENST00000469123 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
SSBP1-208ENST00000469123 ERVK-7P63135 1459 aa12.82□□□□□ -0.36
SSBP1-208ENST00000469123 NUP155O75694 1391 aa12.81□□□□□ -0.36
SSBP1-208ENST00000469123 CFAP65Q6ZU64 1925 aaKnown RBP12.8□□□□□ -0.36
SSBP1-208ENST00000469123 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
SSBP1-208ENST00000469123 CEP170BQ9Y4F5 1589 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-208ENST00000469123 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
SSBP1-208ENST00000469123 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.36
SSBP1-208ENST00000469123 HRCP23327 699 aa12.77□□□□□ -0.37
SSBP1-208ENST00000469123 FBXO31Q5XUX0 539 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-208ENST00000469123 NOS1P29475 1434 aa12.77□□□□□ -0.37
SSBP1-208ENST00000469123 PLA2R1Q13018 1463 aa12.77□□□□□ -0.37
SSBP1-208ENST00000469123 SLC52A1Q9NWF4 448 aa12.76□□□□□ -0.37
SSBP1-208ENST00000469123 E9PCH4 1651 aa12.75□□□□□ -0.37
SSBP1-208ENST00000469123 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
SSBP1-208ENST00000469123 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-208ENST00000469123 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
SSBP1-208ENST00000469123 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SSBP1-208ENST00000469123 PKD2Q13563 968 aa12.73□□□□□ -0.37
SSBP1-208ENST00000469123 SYNMO15061 1565 aa12.72□□□□□ -0.37
SSBP1-208ENST00000469123 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
SSBP1-208ENST00000469123 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
SSBP1-208ENST00000469123 PTPRTO14522 1441 aa12.71□□□□□ -0.38
SSBP1-208ENST00000469123 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
SSBP1-208ENST00000469123 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
SSBP1-208ENST00000469123 HSPA2P54652 639 aa12.7□□□□□ -0.38
SSBP1-208ENST00000469123 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
SSBP1-208ENST00000469123 ADGRB3O60242 1522 aa12.69□□□□□ -0.38
SSBP1-208ENST00000469123 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
SSBP1-208ENST00000469123 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
SSBP1-208ENST00000469123 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-208ENST00000469123 TRPM2O94759 1503 aa12.68□□□□□ -0.38
SSBP1-208ENST00000469123 SLIT1O75093 1534 aa12.67□□□□□ -0.38
SSBP1-208ENST00000469123 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-208ENST00000469123 IDI1Q13907 227 aa12.67□□□□□ -0.38
SSBP1-208ENST00000469123 ANKLE2Q86XL3 938 aa12.67□□□□□ -0.38
SSBP1-208ENST00000469123 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
SSBP1-208ENST00000469123 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
SSBP1-208ENST00000469123 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
SSBP1-208ENST00000469123 EID1Q9Y6B2 187 aa12.65□□□□□ -0.38
SSBP1-208ENST00000469123 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
SSBP1-208ENST00000469123 MED14O60244 1454 aa12.65□□□□□ -0.38
SSBP1-208ENST00000469123 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
SSBP1-208ENST00000469123 KIF1BO60333 1816 aa12.64□□□□□ -0.39
SSBP1-208ENST00000469123 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
SSBP1-208ENST00000469123 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSBP1-208ENST00000469123 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
SSBP1-208ENST00000469123 MYO5BQ9ULV0 1848 aa12.61□□□□□ -0.39
SSBP1-208ENST00000469123 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
SSBP1-208ENST00000469123 NPHP4O75161 1426 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-208ENST00000469123 IQGAP1P46940 1657 aa12.61□□□□□ -0.39
SSBP1-208ENST00000469123 NEURL4Q96JN8 1562 aa12.6□□□□□ -0.39
SSBP1-208ENST00000469123 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
SSBP1-208ENST00000469123 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
SSBP1-208ENST00000469123 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
SSBP1-208ENST00000469123 CHGAP10645 457 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms