RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 RASEFQ8IZ41 740 aa5.57□□□□□ -1.52
TRIM59-202ENST00000468542 METRNQ9UJH8 293 aa5.57□□□□□ -1.52
TRIM59-202ENST00000468542 KDM5CP41229 1560 aa5.57□□□□□ -1.52
TRIM59-202ENST00000468542 COL17A1Q9UMD9 1497 aaPredicted RBP5.57□□□□□ -1.52
TRIM59-202ENST00000468542 PLCH2O75038 1416 aa5.57□□□□□ -1.52
TRIM59-202ENST00000468542 CD109Q6YHK3 1445 aa5.57□□□□□ -1.52
TRIM59-202ENST00000468542 SGIP1Q9BQI5 828 aa5.56□□□□□ -1.52
TRIM59-202ENST00000468542 BMP2KQ9NSY1 1161 aaPredicted RBP5.56□□□□□ -1.52
TRIM59-202ENST00000468542 SUPT6HQ7KZ85 1726 aaKnown RBP5.56□□□□□ -1.52
TRIM59-202ENST00000468542 REREQ9P2R6 1566 aa5.55□□□□□ -1.52
TRIM59-202ENST00000468542 MAP3K13O43283 966 aa5.55□□□□□ -1.52
TRIM59-202ENST00000468542 ABCC1P33527 1531 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 LRRC9Q6ZRR7 1453 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 TIE1P35590 1138 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 MIER1Q8N108 512 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 ZBTB47Q9UFB7 747 aaPredicted RBP5.54□□□□□ -1.52
TRIM59-202ENST00000468542 ATP1B4Q9UN42 357 aaPredicted RBP5.54□□□□□ -1.52
TRIM59-202ENST00000468542 BCORL1Q5H9F3 1711 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 MTUS2Q5JR59 1369 aa5.54□□□□□ -1.52
TRIM59-202ENST00000468542 GPATCH8Q9UKJ3 1502 aaKnown RBP5.53□□□□□ -1.52
TRIM59-202ENST00000468542 MAGI2Q86UL8 1455 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 ARID3CA6NKF2 412 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 NUBP1P53384 320 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 MAMSTRQ6ZN01 415 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 KCNH8Q96L42 1107 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 SAMD9LQ8IVG5 1584 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 ARHGEF40Q8TER5 1519 aa5.53□□□□□ -1.52
TRIM59-202ENST00000468542 FANCAO15360 1455 aa5.52□□□□□ -1.53
TRIM59-202ENST00000468542 ARHGEF5Q12774 1597 aa5.52□□□□□ -1.53
TRIM59-202ENST00000468542 KIAA1107Q9UPP5 1409 aa5.52□□□□□ -1.53
TRIM59-202ENST00000468542 KIDINS220Q9ULH0 1771 aa5.52□□□□□ -1.53
TRIM59-202ENST00000468542 INO80Q9ULG1 1556 aaPredicted RBP5.51□□□□□ -1.53
TRIM59-202ENST00000468542 POGZQ7Z3K3 1410 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 AKNAQ7Z591 1439 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 EFCAB2Q5VUJ9 269 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 SIGLEC1Q9BZZ2 1709 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 MBD5Q9P267 1494 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 MLH3Q9UHC1 1453 aa5.51□□□□□ -1.53
TRIM59-202ENST00000468542 HECW2Q9P2P5 1572 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 MAST1Q9Y2H9 1570 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 CROCC2H7BZ55 1655 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 MIA2Q96PC5 1412 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 ARHGEF12Q9NZN5 1544 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 CCNB3Q8WWL7 1395 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 NCOA2Q15596 1464 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 ZNF518AQ6AHZ1 1483 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 PLEKHH2Q8IVE3 1493 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 PLXNC1O60486 1568 aa5.5□□□□□ -1.53
TRIM59-202ENST00000468542 TTLL13PA6NNM8 815 aa5.49□□□□□ -1.53
TRIM59-202ENST00000468542 COLQQ9Y215 455 aaPredicted RBP5.49□□□□□ -1.53
TRIM59-202ENST00000468542 DENND4BO75064 1496 aaPredicted RBP5.49□□□□□ -1.53
TRIM59-202ENST00000468542 ADGRL1O94910 1474 aa5.49□□□□□ -1.53
TRIM59-202ENST00000468542 TCOF1Q13428 1488 aaKnown RBP5.49□□□□□ -1.53
TRIM59-202ENST00000468542 ADAMTSL3P82987 1691 aa5.49□□□□□ -1.53
TRIM59-202ENST00000468542 ADGBQ8N7X0 1667 aa5.49□□□□□ -1.53
TRIM59-202ENST00000468542 AGLP35573 1532 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 DIP2CQ9Y2E4 1556 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 KANK4Q5T7N3 995 aaPredicted RBP5.48□□□□□ -1.53
TRIM59-202ENST00000468542 RSPH4AQ5TD94 716 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 CFDP1Q9UEE9 299 aaPredicted RBP5.48□□□□□ -1.53
TRIM59-202ENST00000468542 ABCA6Q8N139 1617 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 ARHGAP5Q13017 1502 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 ZFYVE16Q7Z3T8 1539 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 FAM135AQ9P2D6 1515 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 RTEL1-TNFRSF6BF6WH68 1400 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 MYOM3Q5VTT5 1437 aa5.48□□□□□ -1.53
TRIM59-202ENST00000468542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.47□□□□□ -1.53
TRIM59-202ENST00000468542 IER5LQ5T953 404 aa5.47□□□□□ -1.53
TRIM59-202ENST00000468542 DNMT1P26358 1616 aaKnown RBP5.47□□□□□ -1.53
TRIM59-202ENST00000468542 SYCP2Q9BX26 1530 aa5.47□□□□□ -1.53
TRIM59-202ENST00000468542 SHANK2Q9UPX8 1470 aa5.46□□□□□ -1.53
TRIM59-202ENST00000468542 PTPN23Q9H3S7 1636 aa5.46□□□□□ -1.54
TRIM59-202ENST00000468542 EIF2AK4Q9P2K8 1649 aaKnown RBP5.46□□□□□ -1.54
TRIM59-202ENST00000468542 PLCD3Q8N3E9 789 aa5.46□□□□□ -1.54
TRIM59-202ENST00000468542 SCUBE2Q9NQ36 999 aa5.46□□□□□ -1.54
TRIM59-202ENST00000468542 SCAPERQ9BY12 1400 aa5.46□□□□□ -1.54
TRIM59-202ENST00000468542 MROH2AA6NES4 1674 aa5.46□□□□□ -1.54
TRIM59-202ENST00000468542 CAMSAP2Q08AD1 1489 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 ATP7AQ04656 1500 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 IFNL1Q8IU54 200 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 TRAPPC8Q9Y2L5 1435 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 ADGRL2O95490 1459 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 DEPDC5O75140 1603 aa5.45□□□□□ -1.54
TRIM59-202ENST00000468542 RNF17Q9BXT8 1623 aaKnown RBP5.45□□□□□ -1.54
TRIM59-202ENST00000468542 SETD1BQ9UPS6 1966 aaKnown RBP5.44□□□□□ -1.54
TRIM59-202ENST00000468542 FGD6Q6ZV73 1430 aa5.44□□□□□ -1.54
TRIM59-202ENST00000468542 PCDHB13Q9Y5F0 798 aa5.44□□□□□ -1.54
TRIM59-202ENST00000468542 ATP10AO60312 1499 aa5.44□□□□□ -1.54
TRIM59-202ENST00000468542 CCDC141Q6ZP82 1450 aa5.44□□□□□ -1.54
TRIM59-202ENST00000468542 RRBP1Q9P2E9 1410 aaKnown RBP5.43□□□□□ -1.54
TRIM59-202ENST00000468542 YEATS2Q9ULM3 1422 aa5.43□□□□□ -1.54
TRIM59-202ENST00000468542 RAPGEF3O95398 923 aa5.43□□□□□ -1.54
TRIM59-202ENST00000468542 FBXO3Q9UK99 471 aa5.43□□□□□ -1.54
TRIM59-202ENST00000468542 TRIM35Q9UPQ4 493 aa5.43□□□□□ -1.54
TRIM59-202ENST00000468542 FER1L4A9Z1Z3 1794 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 C9orf84Q5VXU9 1444 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 MROH1Q8NDA8 1641 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 FKBP8Q14318 412 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 AFAP1Q8N556 730 aa5.42□□□□□ -1.54
TRIM59-202ENST00000468542 FAM212AQ96EL1 285 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms