RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
COL16A1-208ENST00000468459 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
COL16A1-208ENST00000468459 FAM135AQ9P2D6 1515 aa22.83■■□□□ 1.25
COL16A1-208ENST00000468459 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
COL16A1-208ENST00000468459 CEP170BQ9Y4F5 1589 aaPredicted RBP22.82■■□□□ 1.24
COL16A1-208ENST00000468459 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
COL16A1-208ENST00000468459 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
COL16A1-208ENST00000468459 MAST1Q9Y2H9 1570 aa22.81■■□□□ 1.24
COL16A1-208ENST00000468459 PZPP20742 1482 aa22.81■■□□□ 1.24
COL16A1-208ENST00000468459 TCOF1Q13428 1488 aaKnown RBP22.81■■□□□ 1.24
COL16A1-208ENST00000468459 PKD2Q13563 968 aa22.81■■□□□ 1.24
COL16A1-208ENST00000468459 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
COL16A1-208ENST00000468459 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
COL16A1-208ENST00000468459 A2ML1A8K2U0 1454 aa22.79■■□□□ 1.24
COL16A1-208ENST00000468459 TNRQ92752 1358 aa22.78■■□□□ 1.24
COL16A1-208ENST00000468459 FGD6Q6ZV73 1430 aa22.77■■□□□ 1.24
COL16A1-208ENST00000468459 ABCC5O15440 1437 aa22.74■■□□□ 1.23
COL16A1-208ENST00000468459 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
COL16A1-208ENST00000468459 DNMT1P26358 1616 aaKnown RBP22.72■■□□□ 1.23
COL16A1-208ENST00000468459 ZNF335Q9H4Z2 1342 aaPredicted RBP22.72■■□□□ 1.23
COL16A1-208ENST00000468459 ABCC3O15438 1527 aa22.71■■□□□ 1.23
COL16A1-208ENST00000468459 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
COL16A1-208ENST00000468459 IQSEC2Q5JU85 1478 aa22.7■■□□□ 1.22
COL16A1-208ENST00000468459 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
COL16A1-208ENST00000468459 MROH1Q8NDA8 1641 aa22.68■■□□□ 1.22
COL16A1-208ENST00000468459 DUOX2Q9NRD8 1548 aa22.67■■□□□ 1.22
COL16A1-208ENST00000468459 NLRP1Q9C000 1473 aa22.67■■□□□ 1.22
COL16A1-208ENST00000468459 KIF15Q9NS87 1388 aa22.67■■□□□ 1.22
COL16A1-208ENST00000468459 EIF2AK4Q9P2K8 1649 aaKnown RBP22.67■■□□□ 1.22
COL16A1-208ENST00000468459 DAPK1P53355 1430 aa22.65■■□□□ 1.22
COL16A1-208ENST00000468459 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
COL16A1-208ENST00000468459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.22
COL16A1-208ENST00000468459 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
COL16A1-208ENST00000468459 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
COL16A1-208ENST00000468459 FAM50AQ14320 339 aaKnown RBP22.63■■□□□ 1.21
COL16A1-208ENST00000468459 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
COL16A1-208ENST00000468459 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
COL16A1-208ENST00000468459 NEURL4Q96JN8 1562 aa22.62■■□□□ 1.21
COL16A1-208ENST00000468459 ERVK-7P63135 1459 aa22.61■■□□□ 1.21
COL16A1-208ENST00000468459 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
COL16A1-208ENST00000468459 ZC3H13Q5T200 1668 aaKnown RBP22.59■■□□□ 1.21
COL16A1-208ENST00000468459 ARHGAP31Q2M1Z3 1444 aa22.59■■□□□ 1.21
COL16A1-208ENST00000468459 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-208ENST00000468459 MED14O60244 1454 aa22.57■■□□□ 1.2
COL16A1-208ENST00000468459 RRBP1Q9P2E9 1410 aaKnown RBP22.57■■□□□ 1.2
COL16A1-208ENST00000468459 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
COL16A1-208ENST00000468459 CROCC2H7BZ55 1655 aa22.55■■□□□ 1.2
COL16A1-208ENST00000468459 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
COL16A1-208ENST00000468459 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
COL16A1-208ENST00000468459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL16A1-208ENST00000468459 UBAP1LF5GYI3 381 aa22.51■■□□□ 1.19
COL16A1-208ENST00000468459 ADGRL2O95490 1459 aa22.5■■□□□ 1.19
COL16A1-208ENST00000468459 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
COL16A1-208ENST00000468459 CEP152O94986 1710 aa22.48■■□□□ 1.19
COL16A1-208ENST00000468459 POLR1AO95602 1720 aaPredicted RBP22.48■■□□□ 1.19
COL16A1-208ENST00000468459 LMTK2Q8IWU2 1503 aa22.48■■□□□ 1.19
COL16A1-208ENST00000468459 VWDEQ8N2E2 1590 aa22.48■■□□□ 1.19
COL16A1-208ENST00000468459 CPS1P31327 1500 aa22.47■■□□□ 1.19
COL16A1-208ENST00000468459 ITGAEP38570 1179 aa22.46■■□□□ 1.19
COL16A1-208ENST00000468459 KANK1Q14678 1352 aa22.46■■□□□ 1.19
COL16A1-208ENST00000468459 ARHGAP23Q9P227 1491 aa22.46■■□□□ 1.19
COL16A1-208ENST00000468459 LTKP29376 864 aa22.45■■□□□ 1.18
COL16A1-208ENST00000468459 SLIT1O75093 1534 aa22.42■■□□□ 1.18
COL16A1-208ENST00000468459 IDI1Q13907 227 aa22.42■■□□□ 1.18
COL16A1-208ENST00000468459 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
COL16A1-208ENST00000468459 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
COL16A1-208ENST00000468459 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
COL16A1-208ENST00000468459 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
COL16A1-208ENST00000468459 NOS1P29475 1434 aa22.4■■□□□ 1.18
COL16A1-208ENST00000468459 IQGAP1P46940 1657 aa22.39■■□□□ 1.17
COL16A1-208ENST00000468459 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
COL16A1-208ENST00000468459 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
COL16A1-208ENST00000468459 TOM1O60784 492 aa22.37■■□□□ 1.17
COL16A1-208ENST00000468459 EFCAB6Q5THR3 1501 aa22.36■■□□□ 1.17
COL16A1-208ENST00000468459 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
COL16A1-208ENST00000468459 ILDR2Q71H61 639 aa22.34■■□□□ 1.17
COL16A1-208ENST00000468459 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
COL16A1-208ENST00000468459 LRRC7Q96NW7 1537 aa22.34■■□□□ 1.17
COL16A1-208ENST00000468459 SYNMO15061 1565 aa22.33■■□□□ 1.17
COL16A1-208ENST00000468459 PIK3C2BO00750 1634 aa22.33■■□□□ 1.17
COL16A1-208ENST00000468459 ALKQ9UM73 1620 aa22.33■■□□□ 1.17
COL16A1-208ENST00000468459 SLC52A1Q9NWF4 448 aa22.33■■□□□ 1.17
COL16A1-208ENST00000468459 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
COL16A1-208ENST00000468459 RPRD2Q5VT52 1461 aaKnown RBP22.31■■□□□ 1.16
COL16A1-208ENST00000468459 HSPA1LP34931 641 aa22.31■■□□□ 1.16
COL16A1-208ENST00000468459 PIP4K2BP78356 416 aa22.31■■□□□ 1.16
COL16A1-208ENST00000468459 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
COL16A1-208ENST00000468459 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
COL16A1-208ENST00000468459 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
COL16A1-208ENST00000468459 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
COL16A1-208ENST00000468459 ADGRB3O60242 1522 aa22.24■■□□□ 1.15
COL16A1-208ENST00000468459 TET3O43151 1660 aa22.23■■□□□ 1.15
COL16A1-208ENST00000468459 UNC13BO14795 1591 aa22.22■■□□□ 1.15
COL16A1-208ENST00000468459 NAIPQ13075 1403 aa22.22■■□□□ 1.15
COL16A1-208ENST00000468459 KCNA6P17658 529 aa22.21■■□□□ 1.15
COL16A1-208ENST00000468459 SLC26A8Q96RN1 970 aa22.21■■□□□ 1.15
COL16A1-208ENST00000468459 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
COL16A1-208ENST00000468459 HFM1A2PYH4 1435 aa22.2■■□□□ 1.14
COL16A1-208ENST00000468459 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
COL16A1-208ENST00000468459 NUP155O75694 1391 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms