RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
SSBP1-207ENST00000468267 DAPK1P53355 1430 aa26.53■■□□□ 1.84
SSBP1-207ENST00000468267 KDM5DQ9BY66 1539 aa26.51■■□□□ 1.83
SSBP1-207ENST00000468267 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
SSBP1-207ENST00000468267 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
SSBP1-207ENST00000468267 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
SSBP1-207ENST00000468267 STRCQ7RTU9 1775 aa26.5■■□□□ 1.83
SSBP1-207ENST00000468267 RNF17Q9BXT8 1623 aaKnown RBP26.5■■□□□ 1.83
SSBP1-207ENST00000468267 KIF15Q9NS87 1388 aa26.47■■□□□ 1.83
SSBP1-207ENST00000468267 RRP7BPQ9NSQ0 103 aa26.47■■□□□ 1.83
SSBP1-207ENST00000468267 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
SSBP1-207ENST00000468267 DMRT2Q9Y5R5 561 aa26.44■■□□□ 1.82
SSBP1-207ENST00000468267 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
SSBP1-207ENST00000468267 PZPP20742 1482 aa26.43■■□□□ 1.82
SSBP1-207ENST00000468267 ILDR1Q86SU0 546 aaPredicted RBP26.43■■□□□ 1.82
SSBP1-207ENST00000468267 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
SSBP1-207ENST00000468267 ZNF142P52746 1687 aaPredicted RBP26.42■■□□□ 1.82
SSBP1-207ENST00000468267 FBXO31Q5XUX0 539 aaPredicted RBP26.42■■□□□ 1.82
SSBP1-207ENST00000468267 ERBINQ96RT1 1412 aa26.41■■□□□ 1.82
SSBP1-207ENST00000468267 MROH1Q8NDA8 1641 aa26.41■■□□□ 1.82
SSBP1-207ENST00000468267 ANKRD30AQ9BXX3 1397 aa26.41■■□□□ 1.82
SSBP1-207ENST00000468267 ABCC3O15438 1527 aa26.39■■□□□ 1.82
SSBP1-207ENST00000468267 ZC3H13Q5T200 1668 aaKnown RBP26.39■■□□□ 1.82
SSBP1-207ENST00000468267 CEP170BQ9Y4F5 1589 aaPredicted RBP26.39■■□□□ 1.82
SSBP1-207ENST00000468267 NCOA1Q15788 1441 aa26.39■■□□□ 1.81
SSBP1-207ENST00000468267 CAMSAP1Q5T5Y3 1602 aa26.38■■□□□ 1.81
SSBP1-207ENST00000468267 TNRQ92752 1358 aa26.37■■□□□ 1.81
SSBP1-207ENST00000468267 PTPRTO14522 1441 aa26.35■■□□□ 1.81
SSBP1-207ENST00000468267 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
SSBP1-207ENST00000468267 A2ML1A8K2U0 1454 aa26.35■■□□□ 1.81
SSBP1-207ENST00000468267 ADGRL2O95490 1459 aa26.35■■□□□ 1.81
SSBP1-207ENST00000468267 CEP152O94986 1710 aa26.34■■□□□ 1.81
SSBP1-207ENST00000468267 PRDM15P57071 1507 aaPredicted RBP26.32■■□□□ 1.8
SSBP1-207ENST00000468267 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
SSBP1-207ENST00000468267 CFAP65Q6ZU64 1925 aaKnown RBP26.31■■□□□ 1.8
SSBP1-207ENST00000468267 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
SSBP1-207ENST00000468267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.29■■□□□ 1.8
SSBP1-207ENST00000468267 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
SSBP1-207ENST00000468267 PKD2Q13563 968 aa26.27■■□□□ 1.8
SSBP1-207ENST00000468267 FOXD1Q16676 465 aa26.27■■□□□ 1.8
SSBP1-207ENST00000468267 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
SSBP1-207ENST00000468267 NLRP1Q9C000 1473 aa26.27■■□□□ 1.8
SSBP1-207ENST00000468267 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.79
SSBP1-207ENST00000468267 KANK1Q14678 1352 aa26.26■■□□□ 1.79
SSBP1-207ENST00000468267 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
SSBP1-207ENST00000468267 ERVK-7P63135 1459 aa26.24■■□□□ 1.79
SSBP1-207ENST00000468267 ARHGAP31Q2M1Z3 1444 aa26.24■■□□□ 1.79
SSBP1-207ENST00000468267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.22■■□□□ 1.79
SSBP1-207ENST00000468267 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
SSBP1-207ENST00000468267 VWDEQ8N2E2 1590 aa26.21■■□□□ 1.79
SSBP1-207ENST00000468267 THEMISQ8N1K5 641 aaPredicted RBP26.2■■□□□ 1.78
SSBP1-207ENST00000468267 UGGT1Q9NYU2 1555 aa26.19■■□□□ 1.78
SSBP1-207ENST00000468267 ROCK1Q13464 1354 aa26.19■■□□□ 1.78
SSBP1-207ENST00000468267 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
SSBP1-207ENST00000468267 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.78
SSBP1-207ENST00000468267 ITGAEP38570 1179 aa26.14■■□□□ 1.78
SSBP1-207ENST00000468267 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
SSBP1-207ENST00000468267 LTBP4Q8N2S1 1624 aa26.13■■□□□ 1.77
SSBP1-207ENST00000468267 RRBP1Q9P2E9 1410 aaKnown RBP26.11■■□□□ 1.77
SSBP1-207ENST00000468267 NEURL4Q96JN8 1562 aa26.1■■□□□ 1.77
SSBP1-207ENST00000468267 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
SSBP1-207ENST00000468267 UBR1Q8IWV7 1749 aa26.09■■□□□ 1.77
SSBP1-207ENST00000468267 ZNF335Q9H4Z2 1342 aaPredicted RBP26.07■■□□□ 1.76
SSBP1-207ENST00000468267 UNC13BO14795 1591 aa26.07■■□□□ 1.76
SSBP1-207ENST00000468267 MED14O60244 1454 aa26.04■■□□□ 1.76
SSBP1-207ENST00000468267 TET3O43151 1660 aa26.03■■□□□ 1.76
SSBP1-207ENST00000468267 NOS1P29475 1434 aa26.03■■□□□ 1.76
SSBP1-207ENST00000468267 RPRD2Q5VT52 1461 aaKnown RBP26.02■■□□□ 1.76
SSBP1-207ENST00000468267 SYNMO15061 1565 aa26.02■■□□□ 1.76
SSBP1-207ENST00000468267 PIK3C2BO00750 1634 aa26.02■■□□□ 1.76
SSBP1-207ENST00000468267 NPHP4O75161 1426 aaPredicted RBP26.01■■□□□ 1.75
SSBP1-207ENST00000468267 IDI1Q13907 227 aa26.01■■□□□ 1.75
SSBP1-207ENST00000468267 GCC2Q8IWJ2 1684 aa25.99■■□□□ 1.75
SSBP1-207ENST00000468267 IQSEC2Q5JU85 1478 aa25.99■■□□□ 1.75
SSBP1-207ENST00000468267 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
SSBP1-207ENST00000468267 SLIT1O75093 1534 aa25.98■■□□□ 1.75
SSBP1-207ENST00000468267 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
SSBP1-207ENST00000468267 IQGAP1P46940 1657 aa25.97■■□□□ 1.75
SSBP1-207ENST00000468267 IQGAP3Q86VI3 1631 aa25.97■■□□□ 1.75
SSBP1-207ENST00000468267 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
SSBP1-207ENST00000468267 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
SSBP1-207ENST00000468267 NUP155O75694 1391 aa25.95■■□□□ 1.75
SSBP1-207ENST00000468267 LTKP29376 864 aa25.95■■□□□ 1.74
SSBP1-207ENST00000468267 SCAF11Q99590 1463 aaKnown RBP25.94■■□□□ 1.74
SSBP1-207ENST00000468267 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
SSBP1-207ENST00000468267 TMEM2Q9UHN6 1383 aa25.93■■□□□ 1.74
SSBP1-207ENST00000468267 E9PCH4 1651 aa25.93■■□□□ 1.74
SSBP1-207ENST00000468267 EID1Q9Y6B2 187 aa25.92■■□□□ 1.74
SSBP1-207ENST00000468267 ADGRB3O60242 1522 aa25.89■■□□□ 1.74
SSBP1-207ENST00000468267 NAIPQ13075 1403 aa25.88■■□□□ 1.73
SSBP1-207ENST00000468267 CPS1P31327 1500 aa25.88■■□□□ 1.73
SSBP1-207ENST00000468267 MYO5BQ9ULV0 1848 aa25.84■■□□□ 1.73
SSBP1-207ENST00000468267 HFM1A2PYH4 1435 aa25.82■■□□□ 1.72
SSBP1-207ENST00000468267 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
SSBP1-207ENST00000468267 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
SSBP1-207ENST00000468267 UBAP1LF5GYI3 381 aa25.79■■□□□ 1.72
SSBP1-207ENST00000468267 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
SSBP1-207ENST00000468267 CHGAP10645 457 aaKnown RBP25.75■■□□□ 1.71
SSBP1-207ENST00000468267 HDGFP51858 240 aaKnown RBP25.74■■□□□ 1.71
SSBP1-207ENST00000468267 SPHKAPQ2M3C7 1700 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms