RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
TRIM56-203ENST00000467847 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
TRIM56-203ENST00000467847 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
TRIM56-203ENST00000467847 KDM5DQ9BY66 1539 aa27.41■■□□□ 1.98
TRIM56-203ENST00000467847 PKD2Q13563 968 aa27.4■■□□□ 1.98
TRIM56-203ENST00000467847 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
TRIM56-203ENST00000467847 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
TRIM56-203ENST00000467847 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
TRIM56-203ENST00000467847 TSPY4P0CV99 314 aa27.38■■□□□ 1.97
TRIM56-203ENST00000467847 TSPY10P0CW01 314 aa27.38■■□□□ 1.97
TRIM56-203ENST00000467847 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
TRIM56-203ENST00000467847 ZNF335Q9H4Z2 1342 aaPredicted RBP27.35■■□□□ 1.97
TRIM56-203ENST00000467847 WASHC2CQ9Y4E1 1318 aa27.35■■□□□ 1.97
TRIM56-203ENST00000467847 PZPP20742 1482 aa27.34■■□□□ 1.97
TRIM56-203ENST00000467847 TNRQ92752 1358 aa27.34■■□□□ 1.97
TRIM56-203ENST00000467847 MAP3K1Q13233 1512 aa27.33■■□□□ 1.97
TRIM56-203ENST00000467847 FBXO31Q5XUX0 539 aaPredicted RBP27.33■■□□□ 1.97
TRIM56-203ENST00000467847 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
TRIM56-203ENST00000467847 MAST1Q9Y2H9 1570 aa27.31■■□□□ 1.96
TRIM56-203ENST00000467847 POLR1AO95602 1720 aaPredicted RBP27.28■■□□□ 1.96
TRIM56-203ENST00000467847 MYOM3Q5VTT5 1437 aa27.27■■□□□ 1.96
TRIM56-203ENST00000467847 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
TRIM56-203ENST00000467847 MIA2Q96PC5 1412 aa27.26■■□□□ 1.95
TRIM56-203ENST00000467847 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
TRIM56-203ENST00000467847 SCAF1Q9H7N4 1312 aaKnown RBP27.23■■□□□ 1.95
TRIM56-203ENST00000467847 ZC3H13Q5T200 1668 aaKnown RBP27.22■■□□□ 1.95
TRIM56-203ENST00000467847 NLRP1Q9C000 1473 aa27.22■■□□□ 1.95
TRIM56-203ENST00000467847 NEURL4Q96JN8 1562 aa27.21■■□□□ 1.95
TRIM56-203ENST00000467847 ABCC3O15438 1527 aa27.21■■□□□ 1.95
TRIM56-203ENST00000467847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.94
TRIM56-203ENST00000467847 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
TRIM56-203ENST00000467847 THEMISQ8N1K5 641 aaPredicted RBP27.17■■□□□ 1.94
TRIM56-203ENST00000467847 MROH1Q8NDA8 1641 aa27.16■■□□□ 1.94
TRIM56-203ENST00000467847 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
TRIM56-203ENST00000467847 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
TRIM56-203ENST00000467847 PIP4K2BP78356 416 aa27.14■■□□□ 1.94
TRIM56-203ENST00000467847 APLP2Q06481 763 aa27.14■■□□□ 1.94
TRIM56-203ENST00000467847 CEP152O94986 1710 aa27.13■■□□□ 1.93
TRIM56-203ENST00000467847 CROCC2H7BZ55 1655 aa27.13■■□□□ 1.93
TRIM56-203ENST00000467847 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
TRIM56-203ENST00000467847 TOM1O60784 492 aa27.11■■□□□ 1.93
TRIM56-203ENST00000467847 HSPA1LP34931 641 aa27.11■■□□□ 1.93
TRIM56-203ENST00000467847 DEPDC5O75140 1603 aa27.11■■□□□ 1.93
TRIM56-203ENST00000467847 CFAP65Q6ZU64 1925 aaKnown RBP27.1■■□□□ 1.93
TRIM56-203ENST00000467847 ERVK-7P63135 1459 aa27.1■■□□□ 1.93
TRIM56-203ENST00000467847 SHANK2Q9UPX8 1470 aa27.1■■□□□ 1.93
TRIM56-203ENST00000467847 CPS1P31327 1500 aa27.1■■□□□ 1.93
TRIM56-203ENST00000467847 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
TRIM56-203ENST00000467847 ABCC5O15440 1437 aa27.07■■□□□ 1.92
TRIM56-203ENST00000467847 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
TRIM56-203ENST00000467847 MED14O60244 1454 aa27.07■■□□□ 1.92
TRIM56-203ENST00000467847 MED1Q15648 1581 aaPredicted RBP27.05■■□□□ 1.92
TRIM56-203ENST00000467847 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
TRIM56-203ENST00000467847 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
TRIM56-203ENST00000467847 RRP7BPQ9NSQ0 103 aa27.05■■□□□ 1.92
TRIM56-203ENST00000467847 ERBINQ96RT1 1412 aa27.05■■□□□ 1.92
TRIM56-203ENST00000467847 PRDM15P57071 1507 aaPredicted RBP27.05■■□□□ 1.92
TRIM56-203ENST00000467847 DAPK1P53355 1430 aa27.03■■□□□ 1.92
TRIM56-203ENST00000467847 PHF23Q9BUL5 403 aaPredicted RBP27.03■■□□□ 1.92
TRIM56-203ENST00000467847 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
TRIM56-203ENST00000467847 UBR1Q8IWV7 1749 aa27.01■■□□□ 1.91
TRIM56-203ENST00000467847 ARHGAP31Q2M1Z3 1444 aa26.98■■□□□ 1.91
TRIM56-203ENST00000467847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.97■■□□□ 1.91
TRIM56-203ENST00000467847 KANK1Q14678 1352 aa26.94■■□□□ 1.9
TRIM56-203ENST00000467847 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
TRIM56-203ENST00000467847 ANKRD30AQ9BXX3 1397 aa26.93■■□□□ 1.9
TRIM56-203ENST00000467847 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
TRIM56-203ENST00000467847 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
TRIM56-203ENST00000467847 SLIT1O75093 1534 aa26.89■■□□□ 1.89
TRIM56-203ENST00000467847 ARHGAP23Q9P227 1491 aa26.88■■□□□ 1.89
TRIM56-203ENST00000467847 PIK3C2BO00750 1634 aa26.88■■□□□ 1.89
TRIM56-203ENST00000467847 SYNMO15061 1565 aa26.88■■□□□ 1.89
TRIM56-203ENST00000467847 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
TRIM56-203ENST00000467847 LMTK2Q8IWU2 1503 aa26.85■■□□□ 1.89
TRIM56-203ENST00000467847 LRRC7Q96NW7 1537 aa26.85■■□□□ 1.89
TRIM56-203ENST00000467847 LTKP29376 864 aa26.85■■□□□ 1.89
TRIM56-203ENST00000467847 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
TRIM56-203ENST00000467847 ALKQ9UM73 1620 aa26.84■■□□□ 1.89
TRIM56-203ENST00000467847 EID1Q9Y6B2 187 aa26.83■■□□□ 1.89
TRIM56-203ENST00000467847 STAG3Q9UJ98 1225 aa26.82■■□□□ 1.88
TRIM56-203ENST00000467847 ADGRL2O95490 1459 aa26.81■■□□□ 1.88
TRIM56-203ENST00000467847 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
TRIM56-203ENST00000467847 KDM5AP29375 1690 aaKnown RBP26.8■■□□□ 1.88
TRIM56-203ENST00000467847 TMEM2Q9UHN6 1383 aa26.8■■□□□ 1.88
TRIM56-203ENST00000467847 EFCAB6Q5THR3 1501 aa26.79■■□□□ 1.88
TRIM56-203ENST00000467847 IDI1Q13907 227 aa26.76■■□□□ 1.87
TRIM56-203ENST00000467847 NOS1P29475 1434 aa26.73■■□□□ 1.87
TRIM56-203ENST00000467847 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
TRIM56-203ENST00000467847 XIRP1Q702N8 1843 aaKnown RBP26.72■■□□□ 1.87
TRIM56-203ENST00000467847 ADGRB3O60242 1522 aa26.7■■□□□ 1.87
TRIM56-203ENST00000467847 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
TRIM56-203ENST00000467847 SLC52A1Q9NWF4 448 aa26.67■■□□□ 1.86
TRIM56-203ENST00000467847 TET3O43151 1660 aa26.66■■□□□ 1.86
TRIM56-203ENST00000467847 SLC26A8Q96RN1 970 aa26.63■■□□□ 1.85
TRIM56-203ENST00000467847 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
TRIM56-203ENST00000467847 UNC13BO14795 1591 aa26.62■■□□□ 1.85
TRIM56-203ENST00000467847 MYO5BQ9ULV0 1848 aa26.61■■□□□ 1.85
TRIM56-203ENST00000467847 KCNA6P17658 529 aa26.6■■□□□ 1.85
TRIM56-203ENST00000467847 TMEM94Q12767 1356 aa26.59■■□□□ 1.85
TRIM56-203ENST00000467847 BCANQ96GW7 911 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms