RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.51
NELFA-213ENST00000467661 TSPOAP1O95153 1857 aa24.51■■□□□ 1.51
NELFA-213ENST00000467661 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
NELFA-213ENST00000467661 KDM5CP41229 1560 aa24.49■■□□□ 1.51
NELFA-213ENST00000467661 MAGI2Q86UL8 1455 aa24.48■■□□□ 1.51
NELFA-213ENST00000467661 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
NELFA-213ENST00000467661 PPRC1Q5VV67 1664 aaKnown RBP24.47■■□□□ 1.51
NELFA-213ENST00000467661 USP47Q96K76 1375 aa24.47■■□□□ 1.51
NELFA-213ENST00000467661 CD109Q6YHK3 1445 aa24.46■■□□□ 1.51
NELFA-213ENST00000467661 CCDC144AA2RUR9 1427 aa24.45■■□□□ 1.5
NELFA-213ENST00000467661 C11orf95C9JLR9 678 aaPredicted RBP24.44■■□□□ 1.5
NELFA-213ENST00000467661 ZNF326Q5BKZ1 582 aaKnown RBP24.44■■□□□ 1.5
NELFA-213ENST00000467661 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
NELFA-213ENST00000467661 KIF7Q2M1P5 1343 aa24.44■■□□□ 1.5
NELFA-213ENST00000467661 ARID4BQ4LE39 1312 aaPredicted RBP24.42■■□□□ 1.5
NELFA-213ENST00000467661 TRAPPC8Q9Y2L5 1435 aa24.42■■□□□ 1.5
NELFA-213ENST00000467661 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
NELFA-213ENST00000467661 ATP10AO60312 1499 aa24.38■■□□□ 1.49
NELFA-213ENST00000467661 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
NELFA-213ENST00000467661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.38■■□□□ 1.49
NELFA-213ENST00000467661 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
NELFA-213ENST00000467661 DCAF11Q8TEB1 546 aa24.35■■□□□ 1.49
NELFA-213ENST00000467661 FANCAO15360 1455 aa24.35■■□□□ 1.49
NELFA-213ENST00000467661 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
NELFA-213ENST00000467661 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
NELFA-213ENST00000467661 TRPM1Q7Z4N2 1603 aa24.33■■□□□ 1.49
NELFA-213ENST00000467661 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
NELFA-213ENST00000467661 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
NELFA-213ENST00000467661 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
NELFA-213ENST00000467661 ROCK2O75116 1388 aaKnown RBP24.32■■□□□ 1.48
NELFA-213ENST00000467661 CFAP74Q9C0B2 1584 aa24.32■■□□□ 1.48
NELFA-213ENST00000467661 KDM2AQ9Y2K7 1162 aa24.32■■□□□ 1.48
NELFA-213ENST00000467661 PRAG1Q86YV5 1406 aa24.31■■□□□ 1.48
NELFA-213ENST00000467661 DEPDC5O75140 1603 aa24.31■■□□□ 1.48
NELFA-213ENST00000467661 EIF2AK4Q9P2K8 1649 aaKnown RBP24.31■■□□□ 1.48
NELFA-213ENST00000467661 ATP7AQ04656 1500 aa24.3■■□□□ 1.48
NELFA-213ENST00000467661 LAMC1P11047 1609 aa24.29■■□□□ 1.48
NELFA-213ENST00000467661 NEO1Q92859 1461 aa24.28■■□□□ 1.48
NELFA-213ENST00000467661 ADGRL1O94910 1474 aa24.27■■□□□ 1.48
NELFA-213ENST00000467661 A2MP01023 1474 aa24.27■■□□□ 1.48
NELFA-213ENST00000467661 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
NELFA-213ENST00000467661 E9PCH4 1651 aa24.25■■□□□ 1.47
NELFA-213ENST00000467661 TET3O43151 1660 aa24.23■■□□□ 1.47
NELFA-213ENST00000467661 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
NELFA-213ENST00000467661 GPRASP1Q5JY77 1395 aa24.21■■□□□ 1.47
NELFA-213ENST00000467661 HNRNPUQ00839 825 aaKnown RBP eCLIP24.21■■□□□ 1.47
NELFA-213ENST00000467661 TRPM2O94759 1503 aa24.21■■□□□ 1.47
NELFA-213ENST00000467661 KANK1Q14678 1352 aa24.21■■□□□ 1.47
NELFA-213ENST00000467661 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
NELFA-213ENST00000467661 SPHKAPQ2M3C7 1700 aa24.21■■□□□ 1.47
NELFA-213ENST00000467661 RGL3Q3MIN7 710 aa24.2■■□□□ 1.46
NELFA-213ENST00000467661 CEP152O94986 1710 aa24.19■■□□□ 1.46
NELFA-213ENST00000467661 ST20-MTHFSA0A0A6YYL1 179 aa24.18■■□□□ 1.46
NELFA-213ENST00000467661 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
NELFA-213ENST00000467661 MRS2Q9HD23 443 aa24.18■■□□□ 1.46
NELFA-213ENST00000467661 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
NELFA-213ENST00000467661 VWDEQ8N2E2 1590 aa24.18■■□□□ 1.46
NELFA-213ENST00000467661 NEFLP07196 543 aa24.18■■□□□ 1.46
NELFA-213ENST00000467661 RICTORQ6R327 1708 aa24.16■■□□□ 1.46
NELFA-213ENST00000467661 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
NELFA-213ENST00000467661 PTPRTO14522 1441 aa24.15■■□□□ 1.46
NELFA-213ENST00000467661 ZNF518AQ6AHZ1 1483 aa24.14■■□□□ 1.46
NELFA-213ENST00000467661 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
NELFA-213ENST00000467661 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
NELFA-213ENST00000467661 KIDINS220Q9ULH0 1771 aa24.12■■□□□ 1.45
NELFA-213ENST00000467661 CCDC184Q52MB2 194 aa24.12■■□□□ 1.45
NELFA-213ENST00000467661 STAC3Q96MF2 364 aa24.12■■□□□ 1.45
NELFA-213ENST00000467661 FRMPD1Q5SYB0 1578 aa24.11■■□□□ 1.45
NELFA-213ENST00000467661 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
NELFA-213ENST00000467661 NEURL4Q96JN8 1562 aa24.1■■□□□ 1.45
NELFA-213ENST00000467661 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
NELFA-213ENST00000467661 FKBP8Q14318 412 aa24.09■■□□□ 1.45
NELFA-213ENST00000467661 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
NELFA-213ENST00000467661 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
NELFA-213ENST00000467661 MADDQ8WXG6 1647 aa24.08■■□□□ 1.45
NELFA-213ENST00000467661 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
NELFA-213ENST00000467661 KIF3BO15066 747 aa24.07■■□□□ 1.44
NELFA-213ENST00000467661 RAPGEF3O95398 923 aa24.07■■□□□ 1.44
NELFA-213ENST00000467661 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
NELFA-213ENST00000467661 ZBED9Q6R2W3 1325 aa24.03■■□□□ 1.44
NELFA-213ENST00000467661 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
NELFA-213ENST00000467661 LMTK2Q8IWU2 1503 aa24.02■■□□□ 1.44
NELFA-213ENST00000467661 ZMYM4Q5VZL5 1548 aa24.01■■□□□ 1.43
NELFA-213ENST00000467661 HECW2Q9P2P5 1572 aa24.01■■□□□ 1.43
NELFA-213ENST00000467661 MLH3Q9UHC1 1453 aa24■■□□□ 1.43
NELFA-213ENST00000467661 IQGAP1P46940 1657 aa24■■□□□ 1.43
NELFA-213ENST00000467661 RALBP1Q15311 655 aa24■■□□□ 1.43
NELFA-213ENST00000467661 KIAA1210Q9ULL0 1709 aa23.99■■□□□ 1.43
NELFA-213ENST00000467661 KIF1BO60333 1816 aa23.98■■□□□ 1.43
NELFA-213ENST00000467661 TMF1P82094 1093 aa23.96■■□□□ 1.43
NELFA-213ENST00000467661 TESK2Q96S53 571 aa23.96■■□□□ 1.43
NELFA-213ENST00000467661 MYBBP1AQ9BQG0 1328 aaKnown RBP23.95■■□□□ 1.42
NELFA-213ENST00000467661 BRD4O60885 1362 aaPredicted RBP23.94■■□□□ 1.42
NELFA-213ENST00000467661 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
NELFA-213ENST00000467661 MYOM2P54296 1465 aa23.92■■□□□ 1.42
NELFA-213ENST00000467661 DISP3Q9P2K9 1392 aa23.92■■□□□ 1.42
NELFA-213ENST00000467661 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
NELFA-213ENST00000467661 SCAF11Q99590 1463 aaKnown RBP23.91■■□□□ 1.42
NELFA-213ENST00000467661 CNGB1Q14028 1251 aaPredicted RBP23.91■■□□□ 1.42
NELFA-213ENST00000467661 BCANQ96GW7 911 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms