RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 PKD2Q13563 968 aa22.74■■□□□ 1.23
RB1-202ENST00000467505 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
RB1-202ENST00000467505 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
RB1-202ENST00000467505 MAST1Q9Y2H9 1570 aa22.72■■□□□ 1.23
RB1-202ENST00000467505 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
RB1-202ENST00000467505 WASHC2CQ9Y4E1 1318 aa22.71■■□□□ 1.23
RB1-202ENST00000467505 A2ML1A8K2U0 1454 aa22.71■■□□□ 1.23
RB1-202ENST00000467505 PZPP20742 1482 aa22.7■■□□□ 1.22
RB1-202ENST00000467505 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
RB1-202ENST00000467505 NCKAP5LQ9HCH0 1330 aa22.69■■□□□ 1.22
RB1-202ENST00000467505 TCOF1Q13428 1488 aaKnown RBP22.68■■□□□ 1.22
RB1-202ENST00000467505 TNRQ92752 1358 aa22.68■■□□□ 1.22
RB1-202ENST00000467505 APLP2Q06481 763 aa22.68■■□□□ 1.22
RB1-202ENST00000467505 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
RB1-202ENST00000467505 EIF2AK4Q9P2K8 1649 aaKnown RBP22.67■■□□□ 1.22
RB1-202ENST00000467505 ZC3H13Q5T200 1668 aaKnown RBP22.66■■□□□ 1.22
RB1-202ENST00000467505 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
RB1-202ENST00000467505 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
RB1-202ENST00000467505 POLR1AO95602 1720 aaPredicted RBP22.64■■□□□ 1.21
RB1-202ENST00000467505 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
RB1-202ENST00000467505 FBXO31Q5XUX0 539 aaPredicted RBP22.61■■□□□ 1.21
RB1-202ENST00000467505 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
RB1-202ENST00000467505 ZNF335Q9H4Z2 1342 aaPredicted RBP22.58■■□□□ 1.21
RB1-202ENST00000467505 THEMISQ8N1K5 641 aaPredicted RBP22.57■■□□□ 1.2
RB1-202ENST00000467505 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
RB1-202ENST00000467505 ABCC3O15438 1527 aa22.57■■□□□ 1.2
RB1-202ENST00000467505 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
RB1-202ENST00000467505 PTPN23Q9H3S7 1636 aa22.56■■□□□ 1.2
RB1-202ENST00000467505 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
RB1-202ENST00000467505 ANKLE2Q86XL3 938 aa22.54■■□□□ 1.2
RB1-202ENST00000467505 CEP152O94986 1710 aa22.52■■□□□ 1.2
RB1-202ENST00000467505 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
RB1-202ENST00000467505 NEURL4Q96JN8 1562 aa22.51■■□□□ 1.19
RB1-202ENST00000467505 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
RB1-202ENST00000467505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
RB1-202ENST00000467505 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
RB1-202ENST00000467505 DEPDC5O75140 1603 aa22.5■■□□□ 1.19
RB1-202ENST00000467505 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
RB1-202ENST00000467505 CPS1P31327 1500 aa22.49■■□□□ 1.19
RB1-202ENST00000467505 ABCC5O15440 1437 aa22.48■■□□□ 1.19
RB1-202ENST00000467505 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
RB1-202ENST00000467505 ERVK-7P63135 1459 aa22.48■■□□□ 1.19
RB1-202ENST00000467505 UBAP1LF5GYI3 381 aa22.48■■□□□ 1.19
RB1-202ENST00000467505 PRDM15P57071 1507 aaPredicted RBP22.47■■□□□ 1.19
RB1-202ENST00000467505 DAPK1P53355 1430 aa22.47■■□□□ 1.19
RB1-202ENST00000467505 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
RB1-202ENST00000467505 MED14O60244 1454 aa22.46■■□□□ 1.19
RB1-202ENST00000467505 RRP7BPQ9NSQ0 103 aa22.45■■□□□ 1.18
RB1-202ENST00000467505 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.18
RB1-202ENST00000467505 NPHP4O75161 1426 aaPredicted RBP22.44■■□□□ 1.18
RB1-202ENST00000467505 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
RB1-202ENST00000467505 KANK1Q14678 1352 aa22.44■■□□□ 1.18
RB1-202ENST00000467505 ANKRD30AQ9BXX3 1397 aa22.43■■□□□ 1.18
RB1-202ENST00000467505 ARHGAP31Q2M1Z3 1444 aa22.42■■□□□ 1.18
RB1-202ENST00000467505 UBR1Q8IWV7 1749 aa22.41■■□□□ 1.18
RB1-202ENST00000467505 VWDEQ8N2E2 1590 aa22.38■■□□□ 1.17
RB1-202ENST00000467505 TOM1O60784 492 aa22.37■■□□□ 1.17
RB1-202ENST00000467505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.17
RB1-202ENST00000467505 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
RB1-202ENST00000467505 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
RB1-202ENST00000467505 LMTK2Q8IWU2 1503 aa22.32■■□□□ 1.16
RB1-202ENST00000467505 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
RB1-202ENST00000467505 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
RB1-202ENST00000467505 SLIT1O75093 1534 aa22.31■■□□□ 1.16
RB1-202ENST00000467505 KDM5AP29375 1690 aaKnown RBP22.31■■□□□ 1.16
RB1-202ENST00000467505 SYNMO15061 1565 aa22.31■■□□□ 1.16
RB1-202ENST00000467505 EID1Q9Y6B2 187 aa22.31■■□□□ 1.16
RB1-202ENST00000467505 FAM50AQ14320 339 aaKnown RBP22.3■■□□□ 1.16
RB1-202ENST00000467505 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
RB1-202ENST00000467505 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
RB1-202ENST00000467505 PIK3C2BO00750 1634 aa22.29■■□□□ 1.16
RB1-202ENST00000467505 PIP4K2BP78356 416 aa22.28■■□□□ 1.16
RB1-202ENST00000467505 TXNDC2Q86VQ3 553 aa22.28■■□□□ 1.16
RB1-202ENST00000467505 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
RB1-202ENST00000467505 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
RB1-202ENST00000467505 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
RB1-202ENST00000467505 LRRC7Q96NW7 1537 aa22.23■■□□□ 1.15
RB1-202ENST00000467505 TMEM2Q9UHN6 1383 aa22.23■■□□□ 1.15
RB1-202ENST00000467505 LTKP29376 864 aa22.22■■□□□ 1.15
RB1-202ENST00000467505 ILDR2Q71H61 639 aa22.22■■□□□ 1.15
RB1-202ENST00000467505 RPRD2Q5VT52 1461 aaKnown RBP22.21■■□□□ 1.15
RB1-202ENST00000467505 HSPA1LP34931 641 aa22.2■■□□□ 1.14
RB1-202ENST00000467505 IDI1Q13907 227 aa22.2■■□□□ 1.14
RB1-202ENST00000467505 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
RB1-202ENST00000467505 NOS1P29475 1434 aa22.2■■□□□ 1.14
RB1-202ENST00000467505 TET3O43151 1660 aa22.18■■□□□ 1.14
RB1-202ENST00000467505 ADGRB3O60242 1522 aa22.18■■□□□ 1.14
RB1-202ENST00000467505 SOCS7O14512 581 aa22.18■■□□□ 1.14
RB1-202ENST00000467505 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
RB1-202ENST00000467505 ALKQ9UM73 1620 aa22.14■■□□□ 1.14
RB1-202ENST00000467505 UNC13BO14795 1591 aa22.14■■□□□ 1.13
RB1-202ENST00000467505 ROCK1Q13464 1354 aa22.12■■□□□ 1.13
RB1-202ENST00000467505 MED1Q15648 1581 aaPredicted RBP22.11■■□□□ 1.13
RB1-202ENST00000467505 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
RB1-202ENST00000467505 HDGFP51858 240 aaKnown RBP22.1■■□□□ 1.13
RB1-202ENST00000467505 BCANQ96GW7 911 aa22.07■■□□□ 1.12
RB1-202ENST00000467505 MYO5BQ9ULV0 1848 aa22.07■■□□□ 1.12
RB1-202ENST00000467505 KCNA6P17658 529 aa22.06■■□□□ 1.12
RB1-202ENST00000467505 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
RB1-202ENST00000467505 SLC26A8Q96RN1 970 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms