RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 C3P01024 1663 aa14.58□□□□□ -0.08
SDCCAG3-208ENST00000466579 ANKRD30AQ9BXX3 1397 aa14.58□□□□□ -0.08
SDCCAG3-208ENST00000466579 PTPRKQ15262 1439 aa14.58□□□□□ -0.08
SDCCAG3-208ENST00000466579 ERBINQ96RT1 1412 aa14.58□□□□□ -0.08
SDCCAG3-208ENST00000466579 MROH1Q8NDA8 1641 aa14.56□□□□□ -0.08
SDCCAG3-208ENST00000466579 KIF3BO15066 747 aa14.56□□□□□ -0.08
SDCCAG3-208ENST00000466579 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
SDCCAG3-208ENST00000466579 ROCK1Q13464 1354 aa14.55□□□□□ -0.08
SDCCAG3-208ENST00000466579 KDM5DQ9BY66 1539 aa14.55□□□□□ -0.08
SDCCAG3-208ENST00000466579 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
SDCCAG3-208ENST00000466579 GGT6Q6P531 493 aa14.54□□□□□ -0.08
SDCCAG3-208ENST00000466579 DEPDC5O75140 1603 aa14.54□□□□□ -0.08
SDCCAG3-208ENST00000466579 ZMYM3Q14202 1370 aa14.53□□□□□ -0.08
SDCCAG3-208ENST00000466579 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
SDCCAG3-208ENST00000466579 ZC3H13Q5T200 1668 aaKnown RBP14.52□□□□□ -0.08
SDCCAG3-208ENST00000466579 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.08
SDCCAG3-208ENST00000466579 NPATQ14207 1427 aa14.52□□□□□ -0.08
SDCCAG3-208ENST00000466579 ESF1Q9H501 851 aaKnown RBP14.52□□□□□ -0.09
SDCCAG3-208ENST00000466579 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.09
SDCCAG3-208ENST00000466579 LMTK3Q96Q04 1460 aa14.51□□□□□ -0.09
SDCCAG3-208ENST00000466579 PREX1Q8TCU6 1659 aa14.5□□□□□ -0.09
SDCCAG3-208ENST00000466579 CEBPAP49715 358 aaPredicted RBP14.5□□□□□ -0.09
SDCCAG3-208ENST00000466579 ABCC3O15438 1527 aa14.5□□□□□ -0.09
SDCCAG3-208ENST00000466579 VWDEQ8N2E2 1590 aa14.49□□□□□ -0.09
SDCCAG3-208ENST00000466579 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
SDCCAG3-208ENST00000466579 PZPP20742 1482 aa14.48□□□□□ -0.09
SDCCAG3-208ENST00000466579 LMTK2Q8IWU2 1503 aa14.46□□□□□ -0.09
SDCCAG3-208ENST00000466579 WASHC2CQ9Y4E1 1318 aa14.46□□□□□ -0.09
SDCCAG3-208ENST00000466579 CEP152O94986 1710 aa14.45□□□□□ -0.1
SDCCAG3-208ENST00000466579 CAMSAP1Q5T5Y3 1602 aa14.44□□□□□ -0.1
SDCCAG3-208ENST00000466579 UNC13BO14795 1591 aa14.44□□□□□ -0.1
SDCCAG3-208ENST00000466579 ARHGAP31Q2M1Z3 1444 aa14.44□□□□□ -0.1
SDCCAG3-208ENST00000466579 UHRF1BP1Q6BDS2 1440 aa14.43□□□□□ -0.1
SDCCAG3-208ENST00000466579 PLPPR3Q6T4P5 718 aa14.42□□□□□ -0.1
SDCCAG3-208ENST00000466579 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
SDCCAG3-208ENST00000466579 ZNF142P52746 1687 aaPredicted RBP14.42□□□□□ -0.1
SDCCAG3-208ENST00000466579 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
SDCCAG3-208ENST00000466579 ITGAEP38570 1179 aa14.41□□□□□ -0.1
SDCCAG3-208ENST00000466579 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
SDCCAG3-208ENST00000466579 GCC2Q8IWJ2 1684 aa14.41□□□□□ -0.1
SDCCAG3-208ENST00000466579 KANK1Q14678 1352 aa14.4□□□□□ -0.1
SDCCAG3-208ENST00000466579 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
SDCCAG3-208ENST00000466579 NAIPQ13075 1403 aa14.4□□□□□ -0.1
SDCCAG3-208ENST00000466579 EFCAB6Q5THR3 1501 aa14.39□□□□□ -0.11
SDCCAG3-208ENST00000466579 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
SDCCAG3-208ENST00000466579 TNRQ92752 1358 aa14.38□□□□□ -0.11
SDCCAG3-208ENST00000466579 FBXO31Q5XUX0 539 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-208ENST00000466579 CEP170BQ9Y4F5 1589 aaPredicted RBP14.38□□□□□ -0.11
SDCCAG3-208ENST00000466579 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
SDCCAG3-208ENST00000466579 TET3O43151 1660 aa14.37□□□□□ -0.11
SDCCAG3-208ENST00000466579 A2ML1A8K2U0 1454 aa14.37□□□□□ -0.11
SDCCAG3-208ENST00000466579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
SDCCAG3-208ENST00000466579 RPRD2Q5VT52 1461 aaKnown RBP14.36□□□□□ -0.11
SDCCAG3-208ENST00000466579 NLRP1Q9C000 1473 aa14.36□□□□□ -0.11
SDCCAG3-208ENST00000466579 STRCQ7RTU9 1775 aa14.35□□□□□ -0.11
SDCCAG3-208ENST00000466579 HSPA2P54652 639 aa14.35□□□□□ -0.11
SDCCAG3-208ENST00000466579 NOS1P29475 1434 aa14.33□□□□□ -0.11
SDCCAG3-208ENST00000466579 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.11
SDCCAG3-208ENST00000466579 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
SDCCAG3-208ENST00000466579 E9PCH4 1651 aa14.31□□□□□ -0.12
SDCCAG3-208ENST00000466579 NUP155O75694 1391 aa14.31□□□□□ -0.12
SDCCAG3-208ENST00000466579 SYNMO15061 1565 aa14.3□□□□□ -0.12
SDCCAG3-208ENST00000466579 KDM5AP29375 1690 aaKnown RBP14.3□□□□□ -0.12
SDCCAG3-208ENST00000466579 UBR1Q8IWV7 1749 aa14.28□□□□□ -0.12
SDCCAG3-208ENST00000466579 UGGT1Q9NYU2 1555 aa14.28□□□□□ -0.12
SDCCAG3-208ENST00000466579 PTPRTO14522 1441 aa14.27□□□□□ -0.12
SDCCAG3-208ENST00000466579 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
SDCCAG3-208ENST00000466579 PKD2Q13563 968 aa14.25□□□□□ -0.13
SDCCAG3-208ENST00000466579 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
SDCCAG3-208ENST00000466579 SLC52A1Q9NWF4 448 aa14.25□□□□□ -0.13
SDCCAG3-208ENST00000466579 ACIN1Q9UKV3 1341 aaKnown RBP14.24□□□□□ -0.13
SDCCAG3-208ENST00000466579 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
SDCCAG3-208ENST00000466579 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
SDCCAG3-208ENST00000466579 POLR1AO95602 1720 aaPredicted RBP14.24□□□□□ -0.13
SDCCAG3-208ENST00000466579 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
SDCCAG3-208ENST00000466579 NEURL4Q96JN8 1562 aa14.23□□□□□ -0.13
SDCCAG3-208ENST00000466579 IDI1Q13907 227 aa14.23□□□□□ -0.13
SDCCAG3-208ENST00000466579 SLIT1O75093 1534 aa14.23□□□□□ -0.13
SDCCAG3-208ENST00000466579 ADGRB3O60242 1522 aa14.22□□□□□ -0.13
SDCCAG3-208ENST00000466579 MED14O60244 1454 aa14.22□□□□□ -0.13
SDCCAG3-208ENST00000466579 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.13
SDCCAG3-208ENST00000466579 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
SDCCAG3-208ENST00000466579 TMEM131LA2VDJ0 1609 aa14.19□□□□□ -0.14
SDCCAG3-208ENST00000466579 HRCP23327 699 aa14.19□□□□□ -0.14
SDCCAG3-208ENST00000466579 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
SDCCAG3-208ENST00000466579 TRPM2O94759 1503 aa14.18□□□□□ -0.14
SDCCAG3-208ENST00000466579 TMEM2Q9UHN6 1383 aa14.18□□□□□ -0.14
SDCCAG3-208ENST00000466579 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
SDCCAG3-208ENST00000466579 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
SDCCAG3-208ENST00000466579 MYO5BQ9ULV0 1848 aa14.17□□□□□ -0.14
SDCCAG3-208ENST00000466579 ADRA2BP18089 450 aa14.16□□□□□ -0.14
SDCCAG3-208ENST00000466579 SCAF11Q99590 1463 aaKnown RBP14.16□□□□□ -0.14
SDCCAG3-208ENST00000466579 IQGAP1P46940 1657 aa14.15□□□□□ -0.14
SDCCAG3-208ENST00000466579 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
SDCCAG3-208ENST00000466579 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
SDCCAG3-208ENST00000466579 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
SDCCAG3-208ENST00000466579 LTKP29376 864 aa14.14□□□□□ -0.15
SDCCAG3-208ENST00000466579 CLTCL1P53675 1640 aa14.14□□□□□ -0.15
SDCCAG3-208ENST00000466579 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
SDCCAG3-208ENST00000466579 MPHOSPH9Q99550 1183 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms