RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
LCLAT1-206ENST00000466477 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
LCLAT1-206ENST00000466477 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
LCLAT1-206ENST00000466477 NCKAP5LQ9HCH0 1330 aa23.41■■□□□ 1.34
LCLAT1-206ENST00000466477 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
LCLAT1-206ENST00000466477 CROCC2H7BZ55 1655 aa23.41■■□□□ 1.34
LCLAT1-206ENST00000466477 DAPK1P53355 1430 aa23.41■■□□□ 1.34
LCLAT1-206ENST00000466477 SETD1BQ9UPS6 1966 aaKnown RBP23.4■■□□□ 1.34
LCLAT1-206ENST00000466477 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
LCLAT1-206ENST00000466477 KIF15Q9NS87 1388 aa23.4■■□□□ 1.34
LCLAT1-206ENST00000466477 PPP6R1Q9UPN7 881 aa23.38■■□□□ 1.33
LCLAT1-206ENST00000466477 TNRQ92752 1358 aa23.38■■□□□ 1.33
LCLAT1-206ENST00000466477 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
LCLAT1-206ENST00000466477 PZPP20742 1482 aa23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 TCOF1Q13428 1488 aaKnown RBP23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 CERKQ8TCT0 537 aa23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
LCLAT1-206ENST00000466477 ABCC3O15438 1527 aa23.36■■□□□ 1.33
LCLAT1-206ENST00000466477 MROH1Q8NDA8 1641 aa23.36■■□□□ 1.33
LCLAT1-206ENST00000466477 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
LCLAT1-206ENST00000466477 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
LCLAT1-206ENST00000466477 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
LCLAT1-206ENST00000466477 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.33
LCLAT1-206ENST00000466477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.33■■□□□ 1.33
LCLAT1-206ENST00000466477 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
LCLAT1-206ENST00000466477 CEP152O94986 1710 aa23.32■■□□□ 1.32
LCLAT1-206ENST00000466477 PTPRTO14522 1441 aa23.32■■□□□ 1.32
LCLAT1-206ENST00000466477 FAM135AQ9P2D6 1515 aa23.3■■□□□ 1.32
LCLAT1-206ENST00000466477 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
LCLAT1-206ENST00000466477 ZC3H13Q5T200 1668 aaKnown RBP23.27■■□□□ 1.32
LCLAT1-206ENST00000466477 PLA2R1Q13018 1463 aa23.26■■□□□ 1.31
LCLAT1-206ENST00000466477 ZNF335Q9H4Z2 1342 aaPredicted RBP23.26■■□□□ 1.31
LCLAT1-206ENST00000466477 ANKRD30AQ9BXX3 1397 aa23.25■■□□□ 1.31
LCLAT1-206ENST00000466477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
LCLAT1-206ENST00000466477 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
LCLAT1-206ENST00000466477 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
LCLAT1-206ENST00000466477 LTBP4Q8N2S1 1624 aa23.22■■□□□ 1.31
LCLAT1-206ENST00000466477 SPATA31D1Q6ZQQ2 1576 aa23.21■■□□□ 1.31
LCLAT1-206ENST00000466477 UGGT1Q9NYU2 1555 aa23.21■■□□□ 1.31
LCLAT1-206ENST00000466477 ITGAEP38570 1179 aa23.2■■□□□ 1.3
LCLAT1-206ENST00000466477 PKD2Q13563 968 aa23.2■■□□□ 1.3
LCLAT1-206ENST00000466477 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
LCLAT1-206ENST00000466477 NLRP1Q9C000 1473 aa23.18■■□□□ 1.3
LCLAT1-206ENST00000466477 DEPDC5O75140 1603 aa23.17■■□□□ 1.3
LCLAT1-206ENST00000466477 ADGRL2O95490 1459 aa23.16■■□□□ 1.3
LCLAT1-206ENST00000466477 KANK1Q14678 1352 aa23.15■■□□□ 1.3
LCLAT1-206ENST00000466477 POLR1AO95602 1720 aaPredicted RBP23.15■■□□□ 1.3
LCLAT1-206ENST00000466477 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
LCLAT1-206ENST00000466477 THEMISQ8N1K5 641 aaPredicted RBP23.11■■□□□ 1.29
LCLAT1-206ENST00000466477 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
LCLAT1-206ENST00000466477 ANKLE2Q86XL3 938 aa23.1■■□□□ 1.29
LCLAT1-206ENST00000466477 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.29
LCLAT1-206ENST00000466477 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.28
LCLAT1-206ENST00000466477 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
LCLAT1-206ENST00000466477 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
LCLAT1-206ENST00000466477 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
LCLAT1-206ENST00000466477 PIK3C2BO00750 1634 aa23.04■■□□□ 1.28
LCLAT1-206ENST00000466477 LMTK2Q8IWU2 1503 aa23.04■■□□□ 1.28
LCLAT1-206ENST00000466477 SYNMO15061 1565 aa23.03■■□□□ 1.28
LCLAT1-206ENST00000466477 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
LCLAT1-206ENST00000466477 IQGAP1P46940 1657 aa23.02■■□□□ 1.28
LCLAT1-206ENST00000466477 UBAP1LF5GYI3 381 aa23.01■■□□□ 1.27
LCLAT1-206ENST00000466477 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
LCLAT1-206ENST00000466477 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
LCLAT1-206ENST00000466477 MED14O60244 1454 aa22.98■■□□□ 1.27
LCLAT1-206ENST00000466477 LTKP29376 864 aa22.98■■□□□ 1.27
LCLAT1-206ENST00000466477 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
LCLAT1-206ENST00000466477 IDI1Q13907 227 aa22.97■■□□□ 1.27
LCLAT1-206ENST00000466477 TXNDC2Q86VQ3 553 aa22.97■■□□□ 1.27
LCLAT1-206ENST00000466477 UNC13BO14795 1591 aa22.97■■□□□ 1.27
LCLAT1-206ENST00000466477 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
LCLAT1-206ENST00000466477 NOS1P29475 1434 aa22.95■■□□□ 1.26
LCLAT1-206ENST00000466477 ROCK1Q13464 1354 aa22.95■■□□□ 1.26
LCLAT1-206ENST00000466477 ARHGAP23Q9P227 1491 aa22.94■■□□□ 1.26
LCLAT1-206ENST00000466477 SLIT1O75093 1534 aa22.93■■□□□ 1.26
LCLAT1-206ENST00000466477 TET3O43151 1660 aa22.93■■□□□ 1.26
LCLAT1-206ENST00000466477 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
LCLAT1-206ENST00000466477 CPS1P31327 1500 aa22.92■■□□□ 1.26
LCLAT1-206ENST00000466477 TMEM2Q9UHN6 1383 aa22.91■■□□□ 1.26
LCLAT1-206ENST00000466477 PIP4K2BP78356 416 aa22.91■■□□□ 1.26
LCLAT1-206ENST00000466477 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
LCLAT1-206ENST00000466477 NUP155O75694 1391 aa22.89■■□□□ 1.26
LCLAT1-206ENST00000466477 STRCP1A6NGW2 1772 aa22.89■■□□□ 1.26
LCLAT1-206ENST00000466477 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
LCLAT1-206ENST00000466477 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
LCLAT1-206ENST00000466477 E9PCH4 1651 aa22.87■■□□□ 1.25
LCLAT1-206ENST00000466477 GCC2Q8IWJ2 1684 aa22.87■■□□□ 1.25
LCLAT1-206ENST00000466477 RPRD2Q5VT52 1461 aaKnown RBP22.86■■□□□ 1.25
LCLAT1-206ENST00000466477 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
LCLAT1-206ENST00000466477 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
LCLAT1-206ENST00000466477 BCANQ96GW7 911 aa22.84■■□□□ 1.25
LCLAT1-206ENST00000466477 LRRC7Q96NW7 1537 aa22.83■■□□□ 1.25
LCLAT1-206ENST00000466477 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
LCLAT1-206ENST00000466477 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
LCLAT1-206ENST00000466477 DISP3Q9P2K9 1392 aa22.8■■□□□ 1.24
LCLAT1-206ENST00000466477 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
LCLAT1-206ENST00000466477 KDM5AP29375 1690 aaKnown RBP22.79■■□□□ 1.24
LCLAT1-206ENST00000466477 MYO5BQ9ULV0 1848 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms