RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 DDX12PQ92771 950 aa10.03□□□□□ -0.8
SFPQ-203ENST00000466213 ARID3AQ99856 593 aa10.03□□□□□ -0.8
SFPQ-203ENST00000466213 REPIN1Q9BWE0 567 aaKnown RBP10.03□□□□□ -0.8
SFPQ-203ENST00000466213 CFTRP13569 1480 aa10.02□□□□□ -0.8
SFPQ-203ENST00000466213 ERCC6Q03468 1493 aa10.02□□□□□ -0.8
SFPQ-203ENST00000466213 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
SFPQ-203ENST00000466213 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
SFPQ-203ENST00000466213 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
SFPQ-203ENST00000466213 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
SFPQ-203ENST00000466213 FCHSD2O94868 740 aa10.01□□□□□ -0.81
SFPQ-203ENST00000466213 MS4A1P11836 297 aa10.01□□□□□ -0.81
SFPQ-203ENST00000466213 HRCP23327 699 aa10□□□□□ -0.81
SFPQ-203ENST00000466213 NESP48681 1621 aa10□□□□□ -0.81
SFPQ-203ENST00000466213 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
SFPQ-203ENST00000466213 PTGDRQ13258 359 aa9.99□□□□□ -0.81
SFPQ-203ENST00000466213 HAX1O00165 279 aa9.98□□□□□ -0.81
SFPQ-203ENST00000466213 APBB1O00213 710 aa9.98□□□□□ -0.81
SFPQ-203ENST00000466213 FLIIQ13045 1269 aa9.98□□□□□ -0.81
SFPQ-203ENST00000466213 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
SFPQ-203ENST00000466213 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
SFPQ-203ENST00000466213 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.81
SFPQ-203ENST00000466213 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
SFPQ-203ENST00000466213 TTLL12Q14166 644 aaPredicted RBP9.95□□□□□ -0.82
SFPQ-203ENST00000466213 TMUB1Q9BVT8 246 aa9.95□□□□□ -0.82
SFPQ-203ENST00000466213 EVI5O60447 810 aa9.94□□□□□ -0.82
SFPQ-203ENST00000466213 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
SFPQ-203ENST00000466213 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
SFPQ-203ENST00000466213 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
SFPQ-203ENST00000466213 A6NJR5 290 aa9.91□□□□□ -0.82
SFPQ-203ENST00000466213 EVX2Q03828 476 aa9.91□□□□□ -0.82
SFPQ-203ENST00000466213 CDHR5Q9HBB8 845 aa9.91□□□□□ -0.82
SFPQ-203ENST00000466213 IER5LQ5T953 404 aa9.9□□□□□ -0.82
SFPQ-203ENST00000466213 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
SFPQ-203ENST00000466213 PHOX2BQ99453 314 aa9.9□□□□□ -0.82
SFPQ-203ENST00000466213 TRAK2O60296 914 aa9.9□□□□□ -0.83
SFPQ-203ENST00000466213 TBC1D12O60347 775 aa9.9□□□□□ -0.83
SFPQ-203ENST00000466213 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.83
SFPQ-203ENST00000466213 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
SFPQ-203ENST00000466213 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
SFPQ-203ENST00000466213 SH3D19Q5HYK7 790 aa9.87□□□□□ -0.83
SFPQ-203ENST00000466213 MRC2Q9UBG0 1479 aa9.87□□□□□ -0.83
SFPQ-203ENST00000466213 WRNQ14191 1432 aaPredicted RBP eCLIP9.86□□□□□ -0.83
SFPQ-203ENST00000466213 G3V3G9 751 aa9.86□□□□□ -0.83
SFPQ-203ENST00000466213 MCM6Q14566 821 aa9.86□□□□□ -0.83
SFPQ-203ENST00000466213 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
SFPQ-203ENST00000466213 L3MBTL3Q96JM7 780 aaPredicted RBP9.85□□□□□ -0.83
SFPQ-203ENST00000466213 PLCG2P16885 1265 aa9.84□□□□□ -0.83
SFPQ-203ENST00000466213 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
SFPQ-203ENST00000466213 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
SFPQ-203ENST00000466213 PROCA1Q8NCQ7 364 aaPredicted RBP9.84□□□□□ -0.83
SFPQ-203ENST00000466213 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
SFPQ-203ENST00000466213 PRDM2Q13029 1718 aa9.83□□□□□ -0.84
SFPQ-203ENST00000466213 SSTR3P32745 418 aaPredicted RBP9.82□□□□□ -0.84
SFPQ-203ENST00000466213 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
SFPQ-203ENST00000466213 SKIV2LQ15477 1246 aaKnown RBP9.82□□□□□ -0.84
SFPQ-203ENST00000466213 CLCN1P35523 988 aa9.82□□□□□ -0.84
SFPQ-203ENST00000466213 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
SFPQ-203ENST00000466213 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
SFPQ-203ENST00000466213 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
SFPQ-203ENST00000466213 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
SFPQ-203ENST00000466213 FAM161AQ3B820 660 aa9.81□□□□□ -0.84
SFPQ-203ENST00000466213 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
SFPQ-203ENST00000466213 PHF14O94880 888 aa9.8□□□□□ -0.84
SFPQ-203ENST00000466213 FNBP4Q8N3X1 1017 aaPredicted RBP9.8□□□□□ -0.84
SFPQ-203ENST00000466213 NLRP7Q8WX94 980 aa9.8□□□□□ -0.84
SFPQ-203ENST00000466213 PCDHGA10Q9Y5H3 936 aa9.8□□□□□ -0.84
SFPQ-203ENST00000466213 TOPBP1Q92547 1522 aa9.79□□□□□ -0.84
SFPQ-203ENST00000466213 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
SFPQ-203ENST00000466213 RBM33Q96EV2 1170 aaKnown RBP9.79□□□□□ -0.84
SFPQ-203ENST00000466213 DNMBPQ6XZF7 1577 aa9.79□□□□□ -0.84
SFPQ-203ENST00000466213 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
SFPQ-203ENST00000466213 MAP3K7O43318 606 aa9.78□□□□□ -0.84
SFPQ-203ENST00000466213 CLCN6P51797 869 aa9.78□□□□□ -0.84
SFPQ-203ENST00000466213 EPAS1Q99814 870 aa9.78□□□□□ -0.84
SFPQ-203ENST00000466213 BEGAINQ9BUH8 593 aa9.78□□□□□ -0.84
SFPQ-203ENST00000466213 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
SFPQ-203ENST00000466213 SOGA1O94964 1423 aa9.77□□□□□ -0.84
SFPQ-203ENST00000466213 SLC34A2O95436 690 aa9.77□□□□□ -0.85
SFPQ-203ENST00000466213 FBXO31Q5XUX0 539 aaPredicted RBP9.77□□□□□ -0.85
SFPQ-203ENST00000466213 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
SFPQ-203ENST00000466213 FAM217BQ9NTX9 383 aaPredicted RBP9.77□□□□□ -0.85
SFPQ-203ENST00000466213 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
SFPQ-203ENST00000466213 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.76□□□□□ -0.85
SFPQ-203ENST00000466213 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
SFPQ-203ENST00000466213 CUX2O14529 1486 aa9.76□□□□□ -0.85
SFPQ-203ENST00000466213 WDR62O43379 1518 aa9.75□□□□□ -0.85
SFPQ-203ENST00000466213 CUX1P39880 1505 aa9.75□□□□□ -0.85
SFPQ-203ENST00000466213 PROSER2Q86WR7 435 aaPredicted RBP9.74□□□□□ -0.85
SFPQ-203ENST00000466213 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
SFPQ-203ENST00000466213 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
SFPQ-203ENST00000466213 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
SFPQ-203ENST00000466213 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
SFPQ-203ENST00000466213 TOP2BQ02880 1626 aa9.73□□□□□ -0.85
SFPQ-203ENST00000466213 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
SFPQ-203ENST00000466213 THOC2Q8NI27 1593 aaKnown RBP9.73□□□□□ -0.85
SFPQ-203ENST00000466213 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
SFPQ-203ENST00000466213 PDIA4P13667 645 aaKnown RBP9.73□□□□□ -0.85
SFPQ-203ENST00000466213 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.85
SFPQ-203ENST00000466213 HMGB1P09429 215 aaKnown RBP9.71□□□□□ -0.86
SFPQ-203ENST00000466213 TYW1BQ6NUM6 668 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms