RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PLXNC1O60486 1568 aa25.79■■□□□ 1.72
TSPAN4-210ENST00000464987 DHX29Q7Z478 1369 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-210ENST00000464987 NEFLP07196 543 aa25.79■■□□□ 1.72
TSPAN4-210ENST00000464987 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
TSPAN4-210ENST00000464987 PLCH2O75038 1416 aa25.75■■□□□ 1.71
TSPAN4-210ENST00000464987 TSHZ2Q9NRE2 1034 aa25.73■■□□□ 1.71
TSPAN4-210ENST00000464987 CCDC144AA2RUR9 1427 aa25.73■■□□□ 1.71
TSPAN4-210ENST00000464987 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
TSPAN4-210ENST00000464987 IQGAP3Q86VI3 1631 aa25.73■■□□□ 1.71
TSPAN4-210ENST00000464987 ST20-MTHFSA0A0A6YYL1 179 aa25.72■■□□□ 1.71
TSPAN4-210ENST00000464987 RGL3Q3MIN7 710 aa25.71■■□□□ 1.71
TSPAN4-210ENST00000464987 ABCC1P33527 1531 aa25.7■■□□□ 1.7
TSPAN4-210ENST00000464987 DUOX2Q9NRD8 1548 aa25.7■■□□□ 1.7
TSPAN4-210ENST00000464987 TRAPPC8Q9Y2L5 1435 aa25.7■■□□□ 1.7
TSPAN4-210ENST00000464987 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
TSPAN4-210ENST00000464987 TRPM1Q7Z4N2 1603 aa25.69■■□□□ 1.7
TSPAN4-210ENST00000464987 ROCK2O75116 1388 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-210ENST00000464987 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
TSPAN4-210ENST00000464987 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-210ENST00000464987 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
TSPAN4-210ENST00000464987 IRX6P78412 446 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-210ENST00000464987 A2MP01023 1474 aa25.65■■□□□ 1.7
TSPAN4-210ENST00000464987 MAGI2Q86UL8 1455 aa25.64■■□□□ 1.7
TSPAN4-210ENST00000464987 ERBINQ96RT1 1412 aa25.63■■□□□ 1.69
TSPAN4-210ENST00000464987 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
TSPAN4-210ENST00000464987 AFAP1Q8N556 730 aa25.6■■□□□ 1.69
TSPAN4-210ENST00000464987 ZBED9Q6R2W3 1325 aa25.6■■□□□ 1.69
TSPAN4-210ENST00000464987 E9PCH4 1651 aa25.58■■□□□ 1.69
TSPAN4-210ENST00000464987 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-210ENST00000464987 ZFYVE16Q7Z3T8 1539 aa25.54■■□□□ 1.68
TSPAN4-210ENST00000464987 ATP10AO60312 1499 aa25.53■■□□□ 1.68
TSPAN4-210ENST00000464987 WDR7Q9Y4E6 1490 aa25.52■■□□□ 1.68
TSPAN4-210ENST00000464987 SENP3-EIF4A1A0A087X0R7 540 aa25.51■■□□□ 1.67
TSPAN4-210ENST00000464987 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
TSPAN4-210ENST00000464987 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
TSPAN4-210ENST00000464987 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-210ENST00000464987 ABCA9Q8IUA7 1624 aa25.48■■□□□ 1.67
TSPAN4-210ENST00000464987 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
TSPAN4-210ENST00000464987 LAMC1P11047 1609 aa25.47■■□□□ 1.67
TSPAN4-210ENST00000464987 FANCAO15360 1455 aa25.46■■□□□ 1.67
TSPAN4-210ENST00000464987 PNISRQ8TF01 805 aaKnown RBP25.45■■□□□ 1.67
TSPAN4-210ENST00000464987 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-210ENST00000464987 TMC1Q8TDI8 760 aa25.43■■□□□ 1.66
TSPAN4-210ENST00000464987 TESK2Q96S53 571 aa25.43■■□□□ 1.66
TSPAN4-210ENST00000464987 DISP3Q9P2K9 1392 aa25.43■■□□□ 1.66
TSPAN4-210ENST00000464987 DEPDC5O75140 1603 aa25.43■■□□□ 1.66
TSPAN4-210ENST00000464987 SPHKAPQ2M3C7 1700 aa25.42■■□□□ 1.66
TSPAN4-210ENST00000464987 INO80Q9ULG1 1556 aaPredicted RBP25.42■■□□□ 1.66
TSPAN4-210ENST00000464987 ATP7AQ04656 1500 aa25.42■■□□□ 1.66
TSPAN4-210ENST00000464987 COL17A1Q9UMD9 1497 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-210ENST00000464987 RNF17Q9BXT8 1623 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-210ENST00000464987 CEP152O94986 1710 aa25.39■■□□□ 1.66
TSPAN4-210ENST00000464987 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.65
TSPAN4-210ENST00000464987 CLTCL1P53675 1640 aa25.38■■□□□ 1.65
TSPAN4-210ENST00000464987 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
TSPAN4-210ENST00000464987 SCAPERQ9BY12 1400 aa25.38■■□□□ 1.65
TSPAN4-210ENST00000464987 TRPM2O94759 1503 aa25.38■■□□□ 1.65
TSPAN4-210ENST00000464987 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
TSPAN4-210ENST00000464987 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
TSPAN4-210ENST00000464987 PER1O15534 1290 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-210ENST00000464987 RALBP1Q15311 655 aa25.36■■□□□ 1.65
TSPAN4-210ENST00000464987 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
TSPAN4-210ENST00000464987 TET3O43151 1660 aa25.36■■□□□ 1.65
TSPAN4-210ENST00000464987 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
TSPAN4-210ENST00000464987 KIF3BO15066 747 aa25.34■■□□□ 1.65
TSPAN4-210ENST00000464987 PTPRTO14522 1441 aa25.33■■□□□ 1.65
TSPAN4-210ENST00000464987 SMG6Q86US8 1419 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-210ENST00000464987 LRPPRCP42704 1394 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-210ENST00000464987 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-210ENST00000464987 PARD3Q8TEW0 1356 aa25.32■■□□□ 1.64
TSPAN4-210ENST00000464987 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
TSPAN4-210ENST00000464987 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
TSPAN4-210ENST00000464987 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 ERICH6BQ5W0A0 696 aa25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 PPP4R2Q9NY27 417 aa25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 KIDINS220Q9ULH0 1771 aa25.29■■□□□ 1.64
TSPAN4-210ENST00000464987 PANK3Q9H999 370 aa25.28■■□□□ 1.64
TSPAN4-210ENST00000464987 TMF1P82094 1093 aa25.27■■□□□ 1.64
TSPAN4-210ENST00000464987 CC2D1BQ5T0F9 858 aaKnown RBP25.27■■□□□ 1.64
TSPAN4-210ENST00000464987 UGGT1Q9NYU2 1555 aa25.26■■□□□ 1.63
TSPAN4-210ENST00000464987 KANK1Q14678 1352 aa25.26■■□□□ 1.63
TSPAN4-210ENST00000464987 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
TSPAN4-210ENST00000464987 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
TSPAN4-210ENST00000464987 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
TSPAN4-210ENST00000464987 B4GALNT3Q6L9W6 998 aa25.24■■□□□ 1.63
TSPAN4-210ENST00000464987 NLRP13Q86W25 1043 aa25.24■■□□□ 1.63
TSPAN4-210ENST00000464987 CFAP65Q6ZU64 1925 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-210ENST00000464987 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-210ENST00000464987 PPRC1Q5VV67 1664 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-210ENST00000464987 KIF1BO60333 1816 aa25.17■■□□□ 1.62
TSPAN4-210ENST00000464987 SCAF11Q99590 1463 aaKnown RBP25.16■■□□□ 1.62
TSPAN4-210ENST00000464987 RNF123Q5XPI4 1314 aa25.16■■□□□ 1.62
TSPAN4-210ENST00000464987 EFCAB6Q5THR3 1501 aa25.16■■□□□ 1.62
TSPAN4-210ENST00000464987 MROH2AA6NES4 1674 aa25.16■■□□□ 1.62
TSPAN4-210ENST00000464987 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
TSPAN4-210ENST00000464987 WASHC2CQ9Y4E1 1318 aa25.15■■□□□ 1.62
TSPAN4-210ENST00000464987 NPM1P06748 294 aaKnown RBP eCLIP25.14■■□□□ 1.62
TSPAN4-210ENST00000464987 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms