RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 DDX12PQ92771 950 aa8.8□□□□□ -1
GARNL3-213ENST00000464616 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
GARNL3-213ENST00000464616 RBM33Q96EV2 1170 aaKnown RBP8.79□□□□□ -1
GARNL3-213ENST00000464616 SPDYE16A6NNV3 312 aaPredicted RBP8.78□□□□□ -1
GARNL3-213ENST00000464616 PPP1R3GB7ZBB8 358 aa8.78□□□□□ -1
GARNL3-213ENST00000464616 ZBED2Q9BTP6 218 aa8.78□□□□□ -1
GARNL3-213ENST00000464616 PTPN5P54829 565 aa8.77□□□□□ -1.01
GARNL3-213ENST00000464616 NBR1Q14596 966 aa8.76□□□□□ -1.01
GARNL3-213ENST00000464616 MAP3K7O43318 606 aa8.75□□□□□ -1.01
GARNL3-213ENST00000464616 WNT2BQ93097 391 aa8.75□□□□□ -1.01
GARNL3-213ENST00000464616 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
GARNL3-213ENST00000464616 GRXCR2A6NFK2 248 aa8.73□□□□□ -1.01
GARNL3-213ENST00000464616 PDIA6Q15084 440 aa8.73□□□□□ -1.01
GARNL3-213ENST00000464616 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
GARNL3-213ENST00000464616 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
GARNL3-213ENST00000464616 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
GARNL3-213ENST00000464616 COL9A1P20849 921 aa8.71□□□□□ -1.02
GARNL3-213ENST00000464616 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
GARNL3-213ENST00000464616 ANKK1Q8NFD2 765 aa8.7□□□□□ -1.02
GARNL3-213ENST00000464616 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
GARNL3-213ENST00000464616 KIAA1468Q9P260 1216 aa8.69□□□□□ -1.02
GARNL3-213ENST00000464616 EN1Q05925 392 aaPredicted RBP8.68□□□□□ -1.02
GARNL3-213ENST00000464616 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
GARNL3-213ENST00000464616 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
GARNL3-213ENST00000464616 ONECUT3O60422 494 aaPredicted RBP8.67□□□□□ -1.02
GARNL3-213ENST00000464616 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
GARNL3-213ENST00000464616 LAPTM4BQ86VI4 370 aa8.66□□□□□ -1.02
GARNL3-213ENST00000464616 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
GARNL3-213ENST00000464616 TSR1Q2NL82 804 aaKnown RBP8.65□□□□□ -1.02
GARNL3-213ENST00000464616 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
GARNL3-213ENST00000464616 SEPT9Q9UHD8 586 aaPredicted RBP8.65□□□□□ -1.02
GARNL3-213ENST00000464616 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
GARNL3-213ENST00000464616 HDGFP51858 240 aaKnown RBP8.61□□□□□ -1.03
GARNL3-213ENST00000464616 FAM98CQ17RN3 349 aaKnown RBP8.61□□□□□ -1.03
GARNL3-213ENST00000464616 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
GARNL3-213ENST00000464616 ARHGEF1Q92888 912 aaKnown RBP8.61□□□□□ -1.03
GARNL3-213ENST00000464616 CDCA7LQ96GN5 454 aa8.6□□□□□ -1.03
GARNL3-213ENST00000464616 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
GARNL3-213ENST00000464616 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
GARNL3-213ENST00000464616 BCAMP50895 628 aa8.59□□□□□ -1.03
GARNL3-213ENST00000464616 PRSS12P56730 875 aa8.59□□□□□ -1.03
GARNL3-213ENST00000464616 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-213ENST00000464616 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
GARNL3-213ENST00000464616 OSBPP22059 807 aa8.57□□□□□ -1.04
GARNL3-213ENST00000464616 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
GARNL3-213ENST00000464616 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
GARNL3-213ENST00000464616 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
GARNL3-213ENST00000464616 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
GARNL3-213ENST00000464616 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
GARNL3-213ENST00000464616 SMAPO00193 183 aa8.54□□□□□ -1.04
GARNL3-213ENST00000464616 RNF40O75150 1001 aa8.54□□□□□ -1.04
GARNL3-213ENST00000464616 SLC4A3P48751 1232 aa8.54□□□□□ -1.04
GARNL3-213ENST00000464616 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-213ENST00000464616 PPP4CP60510 307 aa8.54□□□□□ -1.04
GARNL3-213ENST00000464616 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
GARNL3-213ENST00000464616 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
GARNL3-213ENST00000464616 TATDN2Q93075 761 aa8.53□□□□□ -1.04
GARNL3-213ENST00000464616 CDHR5Q9HBB8 845 aa8.53□□□□□ -1.04
GARNL3-213ENST00000464616 WBP1LQ9NX94 342 aa8.53□□□□□ -1.04
GARNL3-213ENST00000464616 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
GARNL3-213ENST00000464616 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
GARNL3-213ENST00000464616 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
GARNL3-213ENST00000464616 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
GARNL3-213ENST00000464616 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-213ENST00000464616 SAMD7Q7Z3H4 446 aa8.5□□□□□ -1.05
GARNL3-213ENST00000464616 KCNC4Q03721 635 aa8.48□□□□□ -1.05
GARNL3-213ENST00000464616 SMYD5Q6GMV2 418 aa8.48□□□□□ -1.05
GARNL3-213ENST00000464616 PADI6Q6TGC4 694 aa8.48□□□□□ -1.05
GARNL3-213ENST00000464616 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
GARNL3-213ENST00000464616 IFFO2Q5TF58 517 aa8.47□□□□□ -1.05
GARNL3-213ENST00000464616 FAM198AQ9UFP1 575 aa8.46□□□□□ -1.06
GARNL3-213ENST00000464616 A0A0G2JS52 829 aa8.44□□□□□ -1.06
GARNL3-213ENST00000464616 SEMA3EO15041 775 aa8.44□□□□□ -1.06
GARNL3-213ENST00000464616 SLF2Q8IX21 1173 aa8.44□□□□□ -1.06
GARNL3-213ENST00000464616 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-213ENST00000464616 NPDC1Q9NQX5 325 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-213ENST00000464616 RGS20O76081 388 aa8.42□□□□□ -1.06
GARNL3-213ENST00000464616 FCHSD2O94868 740 aa8.42□□□□□ -1.06
GARNL3-213ENST00000464616 RBM46Q8TBY0 533 aaKnown RBP8.42□□□□□ -1.06
GARNL3-213ENST00000464616 PTGDRQ13258 359 aa8.41□□□□□ -1.06
GARNL3-213ENST00000464616 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
GARNL3-213ENST00000464616 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
GARNL3-213ENST00000464616 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
GARNL3-213ENST00000464616 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-213ENST00000464616 DNAJB2P25686 324 aa8.38□□□□□ -1.07
GARNL3-213ENST00000464616 PRR14Q9BWN1 585 aa8.38□□□□□ -1.07
GARNL3-213ENST00000464616 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
GARNL3-213ENST00000464616 EYA1Q99502 592 aa8.36□□□□□ -1.07
GARNL3-213ENST00000464616 MTRQ99707 1265 aa8.35□□□□□ -1.07
GARNL3-213ENST00000464616 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-213ENST00000464616 TESPA1A2RU30 521 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-213ENST00000464616 OATP04181 439 aa8.34□□□□□ -1.07
GARNL3-213ENST00000464616 HIC1Q14526 733 aa8.34□□□□□ -1.07
GARNL3-213ENST00000464616 RSPH4AQ5TD94 716 aa8.34□□□□□ -1.07
GARNL3-213ENST00000464616 APLP1P51693 650 aa8.33□□□□□ -1.08
GARNL3-213ENST00000464616 COPS2P61201 443 aa8.33□□□□□ -1.08
GARNL3-213ENST00000464616 KMT5BQ4FZB7 885 aa8.33□□□□□ -1.08
GARNL3-213ENST00000464616 RBM26Q5T8P6 1007 aaKnown RBP8.33□□□□□ -1.08
GARNL3-213ENST00000464616 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
GARNL3-213ENST00000464616 RCCD1A6NED2 376 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms