RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 DIP2BQ9P265 1576 aa27.66■■■□□ 2.02
POLR2J3-203ENST00000464525 C11orf95C9JLR9 678 aaPredicted RBP27.65■■■□□ 2.02
POLR2J3-203ENST00000464525 ZNF326Q5BKZ1 582 aaKnown RBP27.65■■■□□ 2.02
POLR2J3-203ENST00000464525 ZNF518AQ6AHZ1 1483 aa27.65■■■□□ 2.02
POLR2J3-203ENST00000464525 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
POLR2J3-203ENST00000464525 ERBINQ96RT1 1412 aa27.65■■■□□ 2.02
POLR2J3-203ENST00000464525 GLI2P10070 1586 aa27.64■■■□□ 2.02
POLR2J3-203ENST00000464525 RAPGEF3O95398 923 aa27.64■■■□□ 2.02
POLR2J3-203ENST00000464525 POGZQ7Z3K3 1410 aa27.63■■■□□ 2.01
POLR2J3-203ENST00000464525 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
POLR2J3-203ENST00000464525 NEO1Q92859 1461 aa27.62■■■□□ 2.01
POLR2J3-203ENST00000464525 UNC13BO14795 1591 aa27.61■■■□□ 2.01
POLR2J3-203ENST00000464525 TSPOAP1O95153 1857 aa27.6■■■□□ 2.01
POLR2J3-203ENST00000464525 KIDINS220Q9ULH0 1771 aa27.59■■■□□ 2.01
POLR2J3-203ENST00000464525 KDM5CP41229 1560 aa27.55■■■□□ 2
POLR2J3-203ENST00000464525 KIF3BO15066 747 aa27.54■■■□□ 2
POLR2J3-203ENST00000464525 CCER2I3L3R5 266 aa27.53■■■□□ 2
POLR2J3-203ENST00000464525 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
POLR2J3-203ENST00000464525 DHX29Q7Z478 1369 aaKnown RBP27.52■■■□□ 2
POLR2J3-203ENST00000464525 MAGI2Q86UL8 1455 aa27.51■■□□□ 1.99
POLR2J3-203ENST00000464525 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
POLR2J3-203ENST00000464525 IQGAP3Q86VI3 1631 aa27.51■■□□□ 1.99
POLR2J3-203ENST00000464525 CCDC7Q96M83 1385 aa27.5■■□□□ 1.99
POLR2J3-203ENST00000464525 HECW2Q9P2P5 1572 aa27.49■■□□□ 1.99
POLR2J3-203ENST00000464525 MLH3Q9UHC1 1453 aa27.49■■□□□ 1.99
POLR2J3-203ENST00000464525 MYT1Q01538 1121 aa27.48■■□□□ 1.99
POLR2J3-203ENST00000464525 PPRC1Q5VV67 1664 aaKnown RBP27.48■■□□□ 1.99
POLR2J3-203ENST00000464525 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
POLR2J3-203ENST00000464525 RICTORQ6R327 1708 aa27.45■■□□□ 1.99
POLR2J3-203ENST00000464525 A2MP01023 1474 aa27.45■■□□□ 1.99
POLR2J3-203ENST00000464525 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
POLR2J3-203ENST00000464525 KIF7Q2M1P5 1343 aa27.44■■□□□ 1.98
POLR2J3-203ENST00000464525 ABCA6Q8N139 1617 aa27.43■■□□□ 1.98
POLR2J3-203ENST00000464525 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
POLR2J3-203ENST00000464525 DEPDC5O75140 1603 aa27.41■■□□□ 1.98
POLR2J3-203ENST00000464525 USP47Q96K76 1375 aa27.41■■□□□ 1.98
POLR2J3-203ENST00000464525 FRMPD1Q5SYB0 1578 aa27.4■■□□□ 1.98
POLR2J3-203ENST00000464525 RGL3Q3MIN7 710 aa27.39■■□□□ 1.98
POLR2J3-203ENST00000464525 PLA2R1Q13018 1463 aa27.39■■□□□ 1.98
POLR2J3-203ENST00000464525 EIF2AK4Q9P2K8 1649 aaKnown RBP27.39■■□□□ 1.97
POLR2J3-203ENST00000464525 YEATS2Q9ULM3 1422 aa27.38■■□□□ 1.97
POLR2J3-203ENST00000464525 UHRF1BP1Q6BDS2 1440 aa27.38■■□□□ 1.97
POLR2J3-203ENST00000464525 KANK1Q14678 1352 aa27.37■■□□□ 1.97
POLR2J3-203ENST00000464525 CCDC144AA2RUR9 1427 aa27.37■■□□□ 1.97
POLR2J3-203ENST00000464525 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
POLR2J3-203ENST00000464525 GGT6Q6P531 493 aa27.36■■□□□ 1.97
POLR2J3-203ENST00000464525 POLR3GLQ9BT43 218 aa27.35■■□□□ 1.97
POLR2J3-203ENST00000464525 CARD11Q9BXL7 1154 aa27.35■■□□□ 1.97
POLR2J3-203ENST00000464525 DIP2CQ9Y2E4 1556 aa27.35■■□□□ 1.97
POLR2J3-203ENST00000464525 BCORL1Q5H9F3 1711 aa27.33■■□□□ 1.97
POLR2J3-203ENST00000464525 PRDM15P57071 1507 aaPredicted RBP27.33■■□□□ 1.97
POLR2J3-203ENST00000464525 E9PCH4 1651 aa27.33■■□□□ 1.97
POLR2J3-203ENST00000464525 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
POLR2J3-203ENST00000464525 CCDC184Q52MB2 194 aa27.31■■□□□ 1.96
POLR2J3-203ENST00000464525 VWDEQ8N2E2 1590 aa27.31■■□□□ 1.96
POLR2J3-203ENST00000464525 POLR1AO95602 1720 aaPredicted RBP27.29■■□□□ 1.96
POLR2J3-203ENST00000464525 COL17A1Q9UMD9 1497 aaPredicted RBP27.28■■□□□ 1.96
POLR2J3-203ENST00000464525 PRKRIP1Q9H875 184 aaPredicted RBP27.28■■□□□ 1.96
POLR2J3-203ENST00000464525 TET3O43151 1660 aa27.28■■□□□ 1.96
POLR2J3-203ENST00000464525 RNF17Q9BXT8 1623 aaKnown RBP27.26■■□□□ 1.95
POLR2J3-203ENST00000464525 CNGB1Q14028 1251 aaPredicted RBP27.25■■□□□ 1.95
POLR2J3-203ENST00000464525 ATP10AO60312 1499 aa27.25■■□□□ 1.95
POLR2J3-203ENST00000464525 ST20-MTHFSA0A0A6YYL1 179 aa27.25■■□□□ 1.95
POLR2J3-203ENST00000464525 CEP152O94986 1710 aa27.24■■□□□ 1.95
POLR2J3-203ENST00000464525 ZMYM4Q5VZL5 1548 aa27.24■■□□□ 1.95
POLR2J3-203ENST00000464525 SUPT16HQ9Y5B9 1047 aaKnown RBP27.24■■□□□ 1.95
POLR2J3-203ENST00000464525 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
POLR2J3-203ENST00000464525 NBPF1Q3BBV0 1214 aa27.22■■□□□ 1.95
POLR2J3-203ENST00000464525 WASHC2CQ9Y4E1 1318 aa27.2■■□□□ 1.94
POLR2J3-203ENST00000464525 PRAG1Q86YV5 1406 aa27.2■■□□□ 1.94
POLR2J3-203ENST00000464525 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
POLR2J3-203ENST00000464525 SPHKAPQ2M3C7 1700 aa27.19■■□□□ 1.94
POLR2J3-203ENST00000464525 EFCAB6Q5THR3 1501 aa27.18■■□□□ 1.94
POLR2J3-203ENST00000464525 HNRNPUQ00839 825 aaKnown RBP eCLIP27.17■■□□□ 1.94
POLR2J3-203ENST00000464525 PTPRTO14522 1441 aa27.17■■□□□ 1.94
POLR2J3-203ENST00000464525 TRPM2O94759 1503 aa27.16■■□□□ 1.94
POLR2J3-203ENST00000464525 CFAP65Q6ZU64 1925 aaKnown RBP27.15■■□□□ 1.94
POLR2J3-203ENST00000464525 LMTK2Q8IWU2 1503 aa27.14■■□□□ 1.94
POLR2J3-203ENST00000464525 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
POLR2J3-203ENST00000464525 CLTCL1P53675 1640 aa27.13■■□□□ 1.93
POLR2J3-203ENST00000464525 TRPM1Q7Z4N2 1603 aa27.13■■□□□ 1.93
POLR2J3-203ENST00000464525 MRS2Q9HD23 443 aa27.13■■□□□ 1.93
POLR2J3-203ENST00000464525 ABCC3O15438 1527 aa27.13■■□□□ 1.93
POLR2J3-203ENST00000464525 UGGT1Q9NYU2 1555 aa27.12■■□□□ 1.93
POLR2J3-203ENST00000464525 FAM9BQ8IZU0 186 aa27.11■■□□□ 1.93
POLR2J3-203ENST00000464525 NPATQ14207 1427 aa27.11■■□□□ 1.93
POLR2J3-203ENST00000464525 ARID4BQ4LE39 1312 aaPredicted RBP27.09■■□□□ 1.93
POLR2J3-203ENST00000464525 SIGLEC1Q9BZZ2 1709 aa27.06■■□□□ 1.92
POLR2J3-203ENST00000464525 MLECQ14165 292 aa27.05■■□□□ 1.92
POLR2J3-203ENST00000464525 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
POLR2J3-203ENST00000464525 FKBP8Q14318 412 aa27.02■■□□□ 1.92
POLR2J3-203ENST00000464525 ARHGEF40Q8TER5 1519 aa27.01■■□□□ 1.91
POLR2J3-203ENST00000464525 GPRASP1Q5JY77 1395 aa27.01■■□□□ 1.91
POLR2J3-203ENST00000464525 BCANQ96GW7 911 aa27■■□□□ 1.91
POLR2J3-203ENST00000464525 CHGAP10645 457 aaKnown RBP26.99■■□□□ 1.91
POLR2J3-203ENST00000464525 REREQ9P2R6 1566 aa26.99■■□□□ 1.91
POLR2J3-203ENST00000464525 AGLP35573 1532 aa26.96■■□□□ 1.91
POLR2J3-203ENST00000464525 ZC3H13Q5T200 1668 aaKnown RBP26.96■■□□□ 1.91
POLR2J3-203ENST00000464525 TESK2Q96S53 571 aa26.94■■□□□ 1.9
POLR2J3-203ENST00000464525 KIF1BO60333 1816 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms