RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
CLSTN1-204ENST00000464286 PRXQ9BXM0 1461 aa10.14□□□□□ -0.79
CLSTN1-204ENST00000464286 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
CLSTN1-204ENST00000464286 CCER2I3L3R5 266 aa10.13□□□□□ -0.79
CLSTN1-204ENST00000464286 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
CLSTN1-204ENST00000464286 NUDT7P0C024 238 aa10.12□□□□□ -0.79
CLSTN1-204ENST00000464286 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
CLSTN1-204ENST00000464286 ARAP1Q96P48 1450 aa10.11□□□□□ -0.79
CLSTN1-204ENST00000464286 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
CLSTN1-204ENST00000464286 KIF27Q86VH2 1401 aa10.1□□□□□ -0.79
CLSTN1-204ENST00000464286 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
CLSTN1-204ENST00000464286 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
CLSTN1-204ENST00000464286 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
CLSTN1-204ENST00000464286 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
CLSTN1-204ENST00000464286 BBXQ8WY36 941 aaPredicted RBP10.07□□□□□ -0.8
CLSTN1-204ENST00000464286 LHX6Q9UPM6 363 aa10.07□□□□□ -0.8
CLSTN1-204ENST00000464286 KDM4FA0A1W2PPD8 638 aa10.06□□□□□ -0.8
CLSTN1-204ENST00000464286 PDE4AP27815 886 aa10.06□□□□□ -0.8
CLSTN1-204ENST00000464286 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
CLSTN1-204ENST00000464286 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
CLSTN1-204ENST00000464286 SETD5Q9C0A6 1442 aa10.05□□□□□ -0.8
CLSTN1-204ENST00000464286 ANP32CO43423 234 aa10.04□□□□□ -0.8
CLSTN1-204ENST00000464286 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
CLSTN1-204ENST00000464286 BCL11AQ9H165 835 aa10.04□□□□□ -0.8
CLSTN1-204ENST00000464286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLSTN1-204ENST00000464286 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
CLSTN1-204ENST00000464286 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
CLSTN1-204ENST00000464286 ERICH6Q7L0X2 663 aa10.02□□□□□ -0.81
CLSTN1-204ENST00000464286 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
CLSTN1-204ENST00000464286 TBC1D12O60347 775 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
CLSTN1-204ENST00000464286 MAPKBP1O60336 1514 aa10□□□□□ -0.81
CLSTN1-204ENST00000464286 CFAP43Q8NDM7 1665 aa9.99□□□□□ -0.81
CLSTN1-204ENST00000464286 MFSD10Q14728 455 aa9.99□□□□□ -0.81
CLSTN1-204ENST00000464286 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
CLSTN1-204ENST00000464286 CDK11AQ9UQ88 783 aaPredicted RBP9.99□□□□□ -0.81
CLSTN1-204ENST00000464286 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLSTN1-204ENST00000464286 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-204ENST00000464286 RBM19Q9Y4C8 960 aaKnown RBP9.98□□□□□ -0.81
CLSTN1-204ENST00000464286 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
CLSTN1-204ENST00000464286 KANK4Q5T7N3 995 aaPredicted RBP9.96□□□□□ -0.82
CLSTN1-204ENST00000464286 LRRC9Q6ZRR7 1453 aa9.96□□□□□ -0.82
CLSTN1-204ENST00000464286 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-204ENST00000464286 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-204ENST00000464286 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
CLSTN1-204ENST00000464286 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
CLSTN1-204ENST00000464286 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
CLSTN1-204ENST00000464286 PBX2P40425 430 aa9.93□□□□□ -0.82
CLSTN1-204ENST00000464286 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
CLSTN1-204ENST00000464286 AXIN2Q9Y2T1 843 aa9.93□□□□□ -0.82
CLSTN1-204ENST00000464286 CUX1P39880 1505 aa9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 LSM11P83369 360 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 DDX10Q13206 875 aaKnown RBP9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 ANKRD13DQ6ZTN6 518 aa9.92□□□□□ -0.82
CLSTN1-204ENST00000464286 NCAPD3P42695 1498 aa9.91□□□□□ -0.82
CLSTN1-204ENST00000464286 EMILIN3Q9NT22 766 aa9.91□□□□□ -0.82
CLSTN1-204ENST00000464286 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
CLSTN1-204ENST00000464286 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
CLSTN1-204ENST00000464286 PAXIP1Q6ZW49 1069 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-204ENST00000464286 BCANQ96GW7 911 aa9.89□□□□□ -0.83
CLSTN1-204ENST00000464286 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-204ENST00000464286 CFTRP13569 1480 aa9.89□□□□□ -0.83
CLSTN1-204ENST00000464286 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
CLSTN1-204ENST00000464286 EVI5O60447 810 aa9.87□□□□□ -0.83
CLSTN1-204ENST00000464286 ITGAEP38570 1179 aa9.87□□□□□ -0.83
CLSTN1-204ENST00000464286 CFAP44Q96MT7 982 aa9.87□□□□□ -0.83
CLSTN1-204ENST00000464286 PPP4R2Q9NY27 417 aa9.87□□□□□ -0.83
CLSTN1-204ENST00000464286 MAP3K9P80192 1104 aa9.86□□□□□ -0.83
CLSTN1-204ENST00000464286 UACAQ9BZF9 1416 aa9.86□□□□□ -0.83
CLSTN1-204ENST00000464286 CASKIN1Q8WXD9 1431 aa9.85□□□□□ -0.83
CLSTN1-204ENST00000464286 PSEN2P49810 448 aa9.85□□□□□ -0.83
CLSTN1-204ENST00000464286 CAMK2BQ13554 666 aa9.85□□□□□ -0.83
CLSTN1-204ENST00000464286 FMN1Q68DA7 1419 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 PTGER2P43116 358 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 FOSBP53539 338 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 FAM50AQ14320 339 aaKnown RBP9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 DMRTA1Q5VZB9 504 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 CARMIL1Q5VZK9 1371 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 FGD5Q6ZNL6 1462 aa9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
CLSTN1-204ENST00000464286 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
CLSTN1-204ENST00000464286 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
CLSTN1-204ENST00000464286 PCF11O94913 1555 aaKnown RBP9.83□□□□□ -0.84
CLSTN1-204ENST00000464286 CUL7Q14999 1698 aa9.83□□□□□ -0.84
CLSTN1-204ENST00000464286 HFM1A2PYH4 1435 aa9.82□□□□□ -0.84
CLSTN1-204ENST00000464286 IGF1RP08069 1367 aa9.82□□□□□ -0.84
CLSTN1-204ENST00000464286 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
CLSTN1-204ENST00000464286 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
CLSTN1-204ENST00000464286 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
CLSTN1-204ENST00000464286 KCNH8Q96L42 1107 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms