RNA–Protein interactions for RNA: ENST00000464116.2

XRCC6-207, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 359 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-207ENST00000464116 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
XRCC6-207ENST00000464116 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
XRCC6-207ENST00000464116 CD44P16070 742 aaKnown RBP13.61□□□□□ -0.23
XRCC6-207ENST00000464116 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
XRCC6-207ENST00000464116 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
XRCC6-207ENST00000464116 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
XRCC6-207ENST00000464116 RAD21O60216 631 aa13.59□□□□□ -0.23
XRCC6-207ENST00000464116 PTGER2P43116 358 aa13.58□□□□□ -0.24
XRCC6-207ENST00000464116 SKIV2LQ15477 1246 aaKnown RBP13.57□□□□□ -0.24
XRCC6-207ENST00000464116 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
XRCC6-207ENST00000464116 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
XRCC6-207ENST00000464116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■■□□ 17.6
XRCC6-207ENST00000464116 CFTRP13569 1480 aa13.56□□□□□ -0.24
XRCC6-207ENST00000464116 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
XRCC6-207ENST00000464116 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
XRCC6-207ENST00000464116 WDR62O43379 1518 aa13.55□□□□□ -0.24
XRCC6-207ENST00000464116 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
XRCC6-207ENST00000464116 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
XRCC6-207ENST00000464116 PTGDRQ13258 359 aa13.53□□□□□ -0.24
XRCC6-207ENST00000464116 POM121Q96HA1 1249 aa13.53□□□□□ -0.24
XRCC6-207ENST00000464116 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
XRCC6-207ENST00000464116 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
XRCC6-207ENST00000464116 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
XRCC6-207ENST00000464116 CLCN1P35523 988 aa13.51□□□□□ -0.25
XRCC6-207ENST00000464116 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
XRCC6-207ENST00000464116 TRPC6Q9Y210 931 aa13.48□□□□□ -0.25
XRCC6-207ENST00000464116 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
XRCC6-207ENST00000464116 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
XRCC6-207ENST00000464116 DDX12PQ92771 950 aa13.47□□□□□ -0.25
XRCC6-207ENST00000464116 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
XRCC6-207ENST00000464116 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
XRCC6-207ENST00000464116 RETREG2Q8NC44 543 aa13.46□□□□□ -0.25
XRCC6-207ENST00000464116 KIF3CO14782 793 aa13.45□□□□□ -0.26
XRCC6-207ENST00000464116 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
XRCC6-207ENST00000464116 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
XRCC6-207ENST00000464116 TIE1P35590 1138 aa13.44□□□□□ -0.26
XRCC6-207ENST00000464116 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
XRCC6-207ENST00000464116 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
XRCC6-207ENST00000464116 SSTR3P32745 418 aaPredicted RBP13.43□□□□□ -0.26
XRCC6-207ENST00000464116 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
XRCC6-207ENST00000464116 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
XRCC6-207ENST00000464116 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
XRCC6-207ENST00000464116 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
XRCC6-207ENST00000464116 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
XRCC6-207ENST00000464116 ATP1B4Q9UN42 357 aaPredicted RBP13.41□□□□□ -0.26
XRCC6-207ENST00000464116 TBC1D12O60347 775 aa13.4□□□□□ -0.26
XRCC6-207ENST00000464116 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
XRCC6-207ENST00000464116 UPF1Q92900 1129 aaKnown RBP eCLIP13.4□□□□□ -0.26
XRCC6-207ENST00000464116 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
XRCC6-207ENST00000464116 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.4□□□□□ -0.26
XRCC6-207ENST00000464116 ZNF330Q9Y3S2 320 aaPredicted RBP13.4□□□□□ -0.26
XRCC6-207ENST00000464116 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
XRCC6-207ENST00000464116 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
XRCC6-207ENST00000464116 GZF1Q9H116 711 aaPredicted RBP13.39□□□□□ -0.27
XRCC6-207ENST00000464116 PDE4CQ08493 712 aa13.38□□□□□ -0.27
XRCC6-207ENST00000464116 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
XRCC6-207ENST00000464116 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
XRCC6-207ENST00000464116 IRF5Q13568 498 aa13.37□□□□□ -0.27
XRCC6-207ENST00000464116 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
XRCC6-207ENST00000464116 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
XRCC6-207ENST00000464116 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
XRCC6-207ENST00000464116 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
XRCC6-207ENST00000464116 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
XRCC6-207ENST00000464116 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
XRCC6-207ENST00000464116 EVI5O60447 810 aa13.32□□□□□ -0.28
XRCC6-207ENST00000464116 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
XRCC6-207ENST00000464116 PHOX2BQ99453 314 aa13.32□□□□□ -0.28
XRCC6-207ENST00000464116 NPDC1Q9NQX5 325 aaPredicted RBP13.32□□□□□ -0.28
XRCC6-207ENST00000464116 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
XRCC6-207ENST00000464116 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
XRCC6-207ENST00000464116 PATL2C9JE40 543 aaKnown RBP13.31□□□□□ -0.28
XRCC6-207ENST00000464116 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
XRCC6-207ENST00000464116 RFC5P40937 340 aa13.3□□□□□ -0.28
XRCC6-207ENST00000464116 CLK2P49760 499 aaKnown RBP13.3□□□□□ -0.28
XRCC6-207ENST00000464116 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
XRCC6-207ENST00000464116 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
XRCC6-207ENST00000464116 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
XRCC6-207ENST00000464116 TMEM259Q4ZIN3 620 aa13.29□□□□□ -0.28
XRCC6-207ENST00000464116 WWC1Q8IX03 1113 aa13.29□□□□□ -0.28
XRCC6-207ENST00000464116 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
XRCC6-207ENST00000464116 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
XRCC6-207ENST00000464116 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
XRCC6-207ENST00000464116 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
XRCC6-207ENST00000464116 G3V3G9 751 aa13.26□□□□□ -0.29
XRCC6-207ENST00000464116 CLCN6P51797 869 aa13.26□□□□□ -0.29
XRCC6-207ENST00000464116 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
XRCC6-207ENST00000464116 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
XRCC6-207ENST00000464116 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
XRCC6-207ENST00000464116 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
XRCC6-207ENST00000464116 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
XRCC6-207ENST00000464116 EPAS1Q99814 870 aa13.24□□□□□ -0.29
XRCC6-207ENST00000464116 FOXD4L5Q5VV16 416 aaPredicted RBP13.23□□□□□ -0.29
XRCC6-207ENST00000464116 FOXD4L4Q8WXT5 416 aaPredicted RBP13.23□□□□□ -0.29
XRCC6-207ENST00000464116 OATP04181 439 aa13.22□□□□□ -0.29
XRCC6-207ENST00000464116 ANO8Q9HCE9 1232 aaPredicted RBP13.22□□□□□ -0.29
XRCC6-207ENST00000464116 SOCS7O14512 581 aa13.21□□□□□ -0.29
XRCC6-207ENST00000464116 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
XRCC6-207ENST00000464116 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
XRCC6-207ENST00000464116 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
XRCC6-207ENST00000464116 MAP3K7O43318 606 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms