RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZMYM3Q14202 1370 aa27.12■■□□□ 1.93
VPS52-214ENST00000463486 C3P01024 1663 aa27.12■■□□□ 1.93
VPS52-214ENST00000463486 ERBINQ96RT1 1412 aa27.12■■□□□ 1.93
VPS52-214ENST00000463486 PLPPR3Q6T4P5 718 aa27.11■■□□□ 1.93
VPS52-214ENST00000463486 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
VPS52-214ENST00000463486 MROH2AA6NES4 1674 aa27.11■■□□□ 1.93
VPS52-214ENST00000463486 MROH1Q8NDA8 1641 aa27.1■■□□□ 1.93
VPS52-214ENST00000463486 CLTCQ00610 1675 aaKnown RBP27.1■■□□□ 1.93
VPS52-214ENST00000463486 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
VPS52-214ENST00000463486 FAM135AQ9P2D6 1515 aa27.06■■□□□ 1.92
VPS52-214ENST00000463486 LMTK3Q96Q04 1460 aa27.06■■□□□ 1.92
VPS52-214ENST00000463486 KDM5DQ9BY66 1539 aa27.04■■□□□ 1.92
VPS52-214ENST00000463486 ITGAEP38570 1179 aa27.03■■□□□ 1.92
VPS52-214ENST00000463486 WASHC2CQ9Y4E1 1318 aa27.03■■□□□ 1.92
VPS52-214ENST00000463486 DEPDC5O75140 1603 aa27.01■■□□□ 1.92
VPS52-214ENST00000463486 ABCC3O15438 1527 aa27■■□□□ 1.91
VPS52-214ENST00000463486 NPATQ14207 1427 aa27■■□□□ 1.91
VPS52-214ENST00000463486 ANKRD50Q9ULJ7 1429 aa27■■□□□ 1.91
VPS52-214ENST00000463486 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
VPS52-214ENST00000463486 PRDM15P57071 1507 aaPredicted RBP27■■□□□ 1.91
VPS52-214ENST00000463486 VWDEQ8N2E2 1590 aa26.95■■□□□ 1.9
VPS52-214ENST00000463486 PREX1Q8TCU6 1659 aa26.95■■□□□ 1.9
VPS52-214ENST00000463486 PZPP20742 1482 aa26.94■■□□□ 1.9
VPS52-214ENST00000463486 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
VPS52-214ENST00000463486 ZC3H13Q5T200 1668 aaKnown RBP26.93■■□□□ 1.9
VPS52-214ENST00000463486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.91■■□□□ 1.94e-6■■□□□ 11.4
VPS52-214ENST00000463486 HSPA2P54652 639 aa26.9■■□□□ 1.9
VPS52-214ENST00000463486 CEP152O94986 1710 aa26.9■■□□□ 1.9
VPS52-214ENST00000463486 LMTK2Q8IWU2 1503 aa26.89■■□□□ 1.89
VPS52-214ENST00000463486 UHRF1BP1Q6BDS2 1440 aa26.89■■□□□ 1.89
VPS52-214ENST00000463486 ARHGAP31Q2M1Z3 1444 aa26.87■■□□□ 1.89
VPS52-214ENST00000463486 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
VPS52-214ENST00000463486 NAIPQ13075 1403 aa26.86■■□□□ 1.89
VPS52-214ENST00000463486 KANK1Q14678 1352 aa26.84■■□□□ 1.89
VPS52-214ENST00000463486 UNC13BO14795 1591 aa26.84■■□□□ 1.89
VPS52-214ENST00000463486 TNRQ92752 1358 aa26.83■■□□□ 1.88
VPS52-214ENST00000463486 SPATA31D1Q6ZQQ2 1576 aa26.81■■□□□ 1.88
VPS52-214ENST00000463486 MYO3AQ8NEV4 1616 aa26.81■■□□□ 1.88
VPS52-214ENST00000463486 HFM1A2PYH4 1435 aa26.81■■□□□ 1.88
VPS52-214ENST00000463486 ERVK-7P63135 1459 aa26.8■■□□□ 1.88
VPS52-214ENST00000463486 ZNF142P52746 1687 aaPredicted RBP26.76■■□□□ 1.87
VPS52-214ENST00000463486 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
VPS52-214ENST00000463486 EFCAB6Q5THR3 1501 aa26.76■■□□□ 1.87
VPS52-214ENST00000463486 CEP170BQ9Y4F5 1589 aaPredicted RBP26.75■■□□□ 1.87
VPS52-214ENST00000463486 A2ML1A8K2U0 1454 aa26.75■■□□□ 1.87
VPS52-214ENST00000463486 CFAP65Q6ZU64 1925 aaKnown RBP26.73■■□□□ 1.87
VPS52-214ENST00000463486 NUP155O75694 1391 aa26.72■■□□□ 1.87
VPS52-214ENST00000463486 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
VPS52-214ENST00000463486 NLRP1Q9C000 1473 aa26.72■■□□□ 1.87
VPS52-214ENST00000463486 TET3O43151 1660 aa26.71■■□□□ 1.87
VPS52-214ENST00000463486 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
VPS52-214ENST00000463486 NOS1P29475 1434 aa26.7■■□□□ 1.86
VPS52-214ENST00000463486 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
VPS52-214ENST00000463486 SYNMO15061 1565 aa26.65■■□□□ 1.86
VPS52-214ENST00000463486 PLA2R1Q13018 1463 aa26.64■■□□□ 1.86
VPS52-214ENST00000463486 E9PCH4 1651 aa26.63■■□□□ 1.85
VPS52-214ENST00000463486 UGGT1Q9NYU2 1555 aa26.61■■□□□ 1.85
VPS52-214ENST00000463486 IDI1Q13907 227 aa26.6■■□□□ 1.85
VPS52-214ENST00000463486 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
VPS52-214ENST00000463486 NCKAP5LQ9HCH0 1330 aa26.59■■□□□ 1.85
VPS52-214ENST00000463486 UBR1Q8IWV7 1749 aa26.56■■□□□ 1.84
VPS52-214ENST00000463486 SETD5Q9C0A6 1442 aa26.56■■□□□ 1.84
VPS52-214ENST00000463486 PIK3C2BO00750 1634 aa26.55■■□□□ 1.84
VPS52-214ENST00000463486 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
VPS52-214ENST00000463486 PTPRTO14522 1441 aa26.55■■□□□ 1.84
VPS52-214ENST00000463486 PKD2Q13563 968 aa26.54■■□□□ 1.84
VPS52-214ENST00000463486 DMRT2Q9Y5R5 561 aa26.54■■□□□ 1.84
VPS52-214ENST00000463486 TRIM52Q96A61 297 aa26.52■■□□□ 1.84
VPS52-214ENST00000463486 ARHGAP23Q9P227 1491 aa26.5■■□□□ 1.83
VPS52-214ENST00000463486 KDM5AP29375 1690 aaKnown RBP26.49■■□□□ 1.83
VPS52-214ENST00000463486 NEURL4Q96JN8 1562 aa26.49■■□□□ 1.83
VPS52-214ENST00000463486 SLIT1O75093 1534 aa26.48■■□□□ 1.83
VPS52-214ENST00000463486 RAB3GAP2Q9H2M9 1393 aa26.47■■□□□ 1.83
VPS52-214ENST00000463486 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
VPS52-214ENST00000463486 MED14O60244 1454 aa26.45■■□□□ 1.82
VPS52-214ENST00000463486 SLC4A1APQ9BWU0 796 aaKnown RBP26.45■■□□□ 1.82
VPS52-214ENST00000463486 TMEM2Q9UHN6 1383 aa26.45■■□□□ 1.82
VPS52-214ENST00000463486 ADGRB3O60242 1522 aa26.44■■□□□ 1.82
VPS52-214ENST00000463486 LTKP29376 864 aa26.44■■□□□ 1.82
VPS52-214ENST00000463486 POLR1AO95602 1720 aaPredicted RBP26.43■■□□□ 1.82
VPS52-214ENST00000463486 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
VPS52-214ENST00000463486 TMEM131LA2VDJ0 1609 aa26.42■■□□□ 1.82
VPS52-214ENST00000463486 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
VPS52-214ENST00000463486 HRCP23327 699 aa26.4■■□□□ 1.82
VPS52-214ENST00000463486 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.82
VPS52-214ENST00000463486 STAG3Q9UJ98 1225 aa26.39■■□□□ 1.82
VPS52-214ENST00000463486 TRPM2O94759 1503 aa26.39■■□□□ 1.81
VPS52-214ENST00000463486 NPHP4O75161 1426 aaPredicted RBP26.38■■□□□ 1.81
VPS52-214ENST00000463486 SCAF11Q99590 1463 aaKnown RBP26.37■■□□□ 1.81
VPS52-214ENST00000463486 FOXD1Q16676 465 aa26.37■■□□□ 1.81
VPS52-214ENST00000463486 TXNDC2Q86VQ3 553 aa26.37■■□□□ 1.81
VPS52-214ENST00000463486 MYO5BQ9ULV0 1848 aa26.36■■□□□ 1.81
VPS52-214ENST00000463486 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
VPS52-214ENST00000463486 CLTCL1P53675 1640 aa26.33■■□□□ 1.81
VPS52-214ENST00000463486 LTBP4Q8N2S1 1624 aa26.33■■□□□ 1.81
VPS52-214ENST00000463486 EID1Q9Y6B2 187 aa26.31■■□□□ 1.8
VPS52-214ENST00000463486 IQGAP1P46940 1657 aa26.31■■□□□ 1.8
VPS52-214ENST00000463486 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
VPS52-214ENST00000463486 CHGAP10645 457 aaKnown RBP26.29■■□□□ 1.8
VPS52-214ENST00000463486 RIMS2Q9UQ26 1411 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms