RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MROH1Q8NDA8 1641 aa20.75■□□□□ 0.91
PHACTR4-203ENST00000463428 UNC13BO14795 1591 aa20.74■□□□□ 0.91
PHACTR4-203ENST00000463428 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
PHACTR4-203ENST00000463428 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
PHACTR4-203ENST00000463428 GGT6Q6P531 493 aa20.7■□□□□ 0.9
PHACTR4-203ENST00000463428 VWDEQ8N2E2 1590 aa20.69■□□□□ 0.9
PHACTR4-203ENST00000463428 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
PHACTR4-203ENST00000463428 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
PHACTR4-203ENST00000463428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.98e-8■■■□□ 14.6
PHACTR4-203ENST00000463428 MLECQ14165 292 aa20.66■□□□□ 0.9
PHACTR4-203ENST00000463428 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
PHACTR4-203ENST00000463428 NUP155O75694 1391 aa20.66■□□□□ 0.9
PHACTR4-203ENST00000463428 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
PHACTR4-203ENST00000463428 TRIM52Q96A61 297 aa20.64■□□□□ 0.89
PHACTR4-203ENST00000463428 PZPP20742 1482 aa20.63■□□□□ 0.89
PHACTR4-203ENST00000463428 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 ADAMTSL3P82987 1691 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 CEP152O94986 1710 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 KANK1Q14678 1352 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 ABCC3O15438 1527 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 FAM135AQ9P2D6 1515 aa20.62■□□□□ 0.89
PHACTR4-203ENST00000463428 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
PHACTR4-203ENST00000463428 WASHC2CQ9Y4E1 1318 aa20.59■□□□□ 0.89
PHACTR4-203ENST00000463428 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
PHACTR4-203ENST00000463428 MPHOSPH9Q99550 1183 aa20.58■□□□□ 0.88
PHACTR4-203ENST00000463428 TET3O43151 1660 aa20.58■□□□□ 0.88
PHACTR4-203ENST00000463428 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
PHACTR4-203ENST00000463428 MADDQ8WXG6 1647 aa20.56■□□□□ 0.88
PHACTR4-203ENST00000463428 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
PHACTR4-203ENST00000463428 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
PHACTR4-203ENST00000463428 CAMSAP1Q5T5Y3 1602 aa20.55■□□□□ 0.88
PHACTR4-203ENST00000463428 MROH2AA6NES4 1674 aa20.53■□□□□ 0.88
PHACTR4-203ENST00000463428 EFCAB6Q5THR3 1501 aa20.53■□□□□ 0.88
PHACTR4-203ENST00000463428 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
PHACTR4-203ENST00000463428 E9PCH4 1651 aa20.53■□□□□ 0.88
PHACTR4-203ENST00000463428 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
PHACTR4-203ENST00000463428 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
PHACTR4-203ENST00000463428 PKD2Q13563 968 aa20.52■□□□□ 0.87
PHACTR4-203ENST00000463428 KDM4FA0A1W2PPD8 638 aa20.51■□□□□ 0.87
PHACTR4-203ENST00000463428 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
PHACTR4-203ENST00000463428 RIMS1Q86UR5 1692 aaKnown RBP20.51■□□□□ 0.87
PHACTR4-203ENST00000463428 NPATQ14207 1427 aa20.5■□□□□ 0.87
PHACTR4-203ENST00000463428 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
PHACTR4-203ENST00000463428 RPRD2Q5VT52 1461 aaKnown RBP20.48■□□□□ 0.87
PHACTR4-203ENST00000463428 C3P01024 1663 aa20.47■□□□□ 0.87
PHACTR4-203ENST00000463428 FOXD1Q16676 465 aa20.47■□□□□ 0.87
PHACTR4-203ENST00000463428 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
PHACTR4-203ENST00000463428 PTPRTO14522 1441 aa20.44■□□□□ 0.86
PHACTR4-203ENST00000463428 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
PHACTR4-203ENST00000463428 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
PHACTR4-203ENST00000463428 PREX1Q8TCU6 1659 aa20.43■□□□□ 0.86
PHACTR4-203ENST00000463428 NOS1P29475 1434 aa20.43■□□□□ 0.86
PHACTR4-203ENST00000463428 PTPRMP28827 1452 aa20.43■□□□□ 0.86
PHACTR4-203ENST00000463428 ANKRD30BQ9BXX2 1392 aa20.42■□□□□ 0.86
PHACTR4-203ENST00000463428 SPATA31D1Q6ZQQ2 1576 aa20.41■□□□□ 0.86
PHACTR4-203ENST00000463428 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
PHACTR4-203ENST00000463428 SPHKAPQ2M3C7 1700 aa20.41■□□□□ 0.86
PHACTR4-203ENST00000463428 SYNMO15061 1565 aa20.38■□□□□ 0.85
PHACTR4-203ENST00000463428 TRPM2O94759 1503 aa20.37■□□□□ 0.85
PHACTR4-203ENST00000463428 SETD1BQ9UPS6 1966 aaKnown RBP20.35■□□□□ 0.85
PHACTR4-203ENST00000463428 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
PHACTR4-203ENST00000463428 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
PHACTR4-203ENST00000463428 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.84
PHACTR4-203ENST00000463428 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.84
PHACTR4-203ENST00000463428 TNRQ92752 1358 aa20.33■□□□□ 0.84
PHACTR4-203ENST00000463428 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
PHACTR4-203ENST00000463428 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
PHACTR4-203ENST00000463428 IDI1Q13907 227 aa20.3■□□□□ 0.84
PHACTR4-203ENST00000463428 SLC52A1Q9NWF4 448 aa20.3■□□□□ 0.84
PHACTR4-203ENST00000463428 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
PHACTR4-203ENST00000463428 CCDC144AA2RUR9 1427 aa20.29■□□□□ 0.84
PHACTR4-203ENST00000463428 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
PHACTR4-203ENST00000463428 MYO3AQ8NEV4 1616 aa20.25■□□□□ 0.83
PHACTR4-203ENST00000463428 KIF1BO60333 1816 aa20.24■□□□□ 0.83
PHACTR4-203ENST00000463428 SPATA31E1Q6ZUB1 1445 aa20.22■□□□□ 0.83
PHACTR4-203ENST00000463428 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
PHACTR4-203ENST00000463428 NEURL4Q96JN8 1562 aa20.22■□□□□ 0.83
PHACTR4-203ENST00000463428 MYO5BQ9ULV0 1848 aa20.22■□□□□ 0.83
PHACTR4-203ENST00000463428 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
PHACTR4-203ENST00000463428 KDM5AP29375 1690 aaKnown RBP20.21■□□□□ 0.83
PHACTR4-203ENST00000463428 UBR1Q8IWV7 1749 aa20.2■□□□□ 0.82
PHACTR4-203ENST00000463428 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
PHACTR4-203ENST00000463428 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
PHACTR4-203ENST00000463428 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
PHACTR4-203ENST00000463428 CEP170BQ9Y4F5 1589 aaPredicted RBP20.19■□□□□ 0.82
PHACTR4-203ENST00000463428 UHRF1BP1Q6BDS2 1440 aa20.17■□□□□ 0.82
PHACTR4-203ENST00000463428 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
PHACTR4-203ENST00000463428 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
PHACTR4-203ENST00000463428 STAG3Q9UJ98 1225 aa20.13■□□□□ 0.81
PHACTR4-203ENST00000463428 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
PHACTR4-203ENST00000463428 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
PHACTR4-203ENST00000463428 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
PHACTR4-203ENST00000463428 TIMELESSQ9UNS1 1208 aa20.1■□□□□ 0.81
PHACTR4-203ENST00000463428 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
PHACTR4-203ENST00000463428 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
PHACTR4-203ENST00000463428 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
PHACTR4-203ENST00000463428 NEXMIFQ5QGS0 1516 aa20.1■□□□□ 0.81
PHACTR4-203ENST00000463428 TMEM2Q9UHN6 1383 aa20.09■□□□□ 0.81
PHACTR4-203ENST00000463428 SLIT1O75093 1534 aa20.09■□□□□ 0.81
PHACTR4-203ENST00000463428 PPLO60437 1756 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms