RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
RBM39-223ENST00000463004 RPGRIP1LQ68CZ1 1315 aa15.42■□□□□ 0.06
RBM39-223ENST00000463004 NCOA1Q15788 1441 aa15.42■□□□□ 0.06
RBM39-223ENST00000463004 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
RBM39-223ENST00000463004 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
RBM39-223ENST00000463004 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
RBM39-223ENST00000463004 STK26Q9P289 416 aa15.41■□□□□ 0.06
RBM39-223ENST00000463004 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
RBM39-223ENST00000463004 ERICH6BQ5W0A0 696 aa15.4■□□□□ 0.06
RBM39-223ENST00000463004 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
RBM39-223ENST00000463004 PLCH2O75038 1416 aa15.39■□□□□ 0.05
RBM39-223ENST00000463004 POGZQ7Z3K3 1410 aa15.39■□□□□ 0.05
RBM39-223ENST00000463004 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
RBM39-223ENST00000463004 DISP1Q96F81 1524 aa15.37■□□□□ 0.05
RBM39-223ENST00000463004 ANKRD30BQ9BXX2 1392 aa15.37■□□□□ 0.05
RBM39-223ENST00000463004 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
RBM39-223ENST00000463004 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
RBM39-223ENST00000463004 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
RBM39-223ENST00000463004 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
RBM39-223ENST00000463004 NGEFQ8N5V2 710 aa15.36■□□□□ 0.05
RBM39-223ENST00000463004 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
RBM39-223ENST00000463004 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
RBM39-223ENST00000463004 MYBBP1AQ9BQG0 1328 aaKnown RBP15.36■□□□□ 0.05
RBM39-223ENST00000463004 ABCC2Q92887 1545 aa15.35■□□□□ 0.05
RBM39-223ENST00000463004 FANCAO15360 1455 aa15.35■□□□□ 0.05
RBM39-223ENST00000463004 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
RBM39-223ENST00000463004 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
RBM39-223ENST00000463004 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
RBM39-223ENST00000463004 SHANK2Q9UPX8 1470 aa15.34■□□□□ 0.05
RBM39-223ENST00000463004 CCDC7Q96M83 1385 aa15.34■□□□□ 0.05
RBM39-223ENST00000463004 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
RBM39-223ENST00000463004 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
RBM39-223ENST00000463004 WASHC2AQ641Q2 1341 aa15.33■□□□□ 0.05
RBM39-223ENST00000463004 CENPJQ9HC77 1338 aaPredicted RBP15.33■□□□□ 0.04
RBM39-223ENST00000463004 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.04
RBM39-223ENST00000463004 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
RBM39-223ENST00000463004 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
RBM39-223ENST00000463004 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
RBM39-223ENST00000463004 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
RBM39-223ENST00000463004 CGNL1Q0VF96 1302 aa15.31■□□□□ 0.04
RBM39-223ENST00000463004 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
RBM39-223ENST00000463004 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
RBM39-223ENST00000463004 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
RBM39-223ENST00000463004 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
RBM39-223ENST00000463004 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
RBM39-223ENST00000463004 DUOX2Q9NRD8 1548 aa15.29■□□□□ 0.04
RBM39-223ENST00000463004 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
RBM39-223ENST00000463004 NPM2Q86SE8 214 aaKnown RBP15.28■□□□□ 0.04
RBM39-223ENST00000463004 PANK3Q9H999 370 aa15.27■□□□□ 0.04
RBM39-223ENST00000463004 CEP170Q5SW79 1584 aa15.27■□□□□ 0.04
RBM39-223ENST00000463004 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
RBM39-223ENST00000463004 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
RBM39-223ENST00000463004 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
RBM39-223ENST00000463004 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
RBM39-223ENST00000463004 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
RBM39-223ENST00000463004 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
RBM39-223ENST00000463004 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
RBM39-223ENST00000463004 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
RBM39-223ENST00000463004 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
RBM39-223ENST00000463004 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
RBM39-223ENST00000463004 RPRD2Q5VT52 1461 aaKnown RBP15.23■□□□□ 0.03
RBM39-223ENST00000463004 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
RBM39-223ENST00000463004 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
RBM39-223ENST00000463004 NGDNQ8NEJ9 315 aaKnown RBP15.22■□□□□ 0.03
RBM39-223ENST00000463004 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
RBM39-223ENST00000463004 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.038e-22■□□□□ 9.7
RBM39-223ENST00000463004 THEMISQ8N1K5 641 aaPredicted RBP15.22■□□□□ 0.03
RBM39-223ENST00000463004 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
RBM39-223ENST00000463004 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
RBM39-223ENST00000463004 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
RBM39-223ENST00000463004 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
RBM39-223ENST00000463004 ADGRL2O95490 1459 aa15.19■□□□□ 0.02
RBM39-223ENST00000463004 DNMT1P26358 1616 aaKnown RBP15.18■□□□□ 0.02
RBM39-223ENST00000463004 BRD4O60885 1362 aaPredicted RBP15.17■□□□□ 0.02
RBM39-223ENST00000463004 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
RBM39-223ENST00000463004 COG3Q96JB2 828 aa15.17■□□□□ 0.02
RBM39-223ENST00000463004 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
RBM39-223ENST00000463004 KDM5BQ9UGL1 1544 aa15.16■□□□□ 0.02
RBM39-223ENST00000463004 ABCA8O94911 1581 aa15.16■□□□□ 0.02
RBM39-223ENST00000463004 ZBED9Q6R2W3 1325 aa15.16■□□□□ 0.02
RBM39-223ENST00000463004 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
RBM39-223ENST00000463004 A2MP01023 1474 aa15.15■□□□□ 0.02
RBM39-223ENST00000463004 CFAP70Q5T0N1 1121 aa15.15■□□□□ 0.02
RBM39-223ENST00000463004 PTPRKQ15262 1439 aa15.15■□□□□ 0.02
RBM39-223ENST00000463004 MINK1Q8N4C8 1332 aaPredicted RBP15.15■□□□□ 0.02
RBM39-223ENST00000463004 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
RBM39-223ENST00000463004 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
RBM39-223ENST00000463004 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
RBM39-223ENST00000463004 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
RBM39-223ENST00000463004 CFAP44Q96MT7 982 aa15.12■□□□□ 0.01
RBM39-223ENST00000463004 ATAD2Q6PL18 1390 aa15.12■□□□□ 0.01
RBM39-223ENST00000463004 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
RBM39-223ENST00000463004 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
RBM39-223ENST00000463004 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
RBM39-223ENST00000463004 ARHGEF5Q12774 1597 aa15.1■□□□□ 0.01
RBM39-223ENST00000463004 AMPHP49418 695 aa15.1■□□□□ 0.01
RBM39-223ENST00000463004 HDAC5Q9UQL6 1122 aa15.09■□□□□ 0.01
RBM39-223ENST00000463004 NEO1Q92859 1461 aa15.09■□□□□ 0.01
RBM39-223ENST00000463004 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
RBM39-223ENST00000463004 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms