RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
TRAPPC3-205ENST00000462715 DHX29Q7Z478 1369 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 NCOA1Q15788 1441 aa16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 AGLP35573 1532 aa16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 ROCK1Q13464 1354 aa16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
TRAPPC3-205ENST00000462715 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
TRAPPC3-205ENST00000462715 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
TRAPPC3-205ENST00000462715 ERBINQ96RT1 1412 aa16.25■□□□□ 0.19
TRAPPC3-205ENST00000462715 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
TRAPPC3-205ENST00000462715 BCORL1Q5H9F3 1711 aa16.23■□□□□ 0.19
TRAPPC3-205ENST00000462715 MLECQ14165 292 aa16.21■□□□□ 0.19
TRAPPC3-205ENST00000462715 KIF3BO15066 747 aa16.21■□□□□ 0.19
TRAPPC3-205ENST00000462715 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
TRAPPC3-205ENST00000462715 ANKRD50Q9ULJ7 1429 aa16.2■□□□□ 0.18
TRAPPC3-205ENST00000462715 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
TRAPPC3-205ENST00000462715 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
TRAPPC3-205ENST00000462715 HFM1A2PYH4 1435 aa16.18■□□□□ 0.18
TRAPPC3-205ENST00000462715 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
TRAPPC3-205ENST00000462715 GGT6Q6P531 493 aa16.18■□□□□ 0.18
TRAPPC3-205ENST00000462715 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-205ENST00000462715 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
TRAPPC3-205ENST00000462715 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
TRAPPC3-205ENST00000462715 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
TRAPPC3-205ENST00000462715 NAIPQ13075 1403 aa16.16■□□□□ 0.18
TRAPPC3-205ENST00000462715 FER1L4A9Z1Z3 1794 aa16.16■□□□□ 0.18
TRAPPC3-205ENST00000462715 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
TRAPPC3-205ENST00000462715 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
TRAPPC3-205ENST00000462715 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.17
TRAPPC3-205ENST00000462715 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
TRAPPC3-205ENST00000462715 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
TRAPPC3-205ENST00000462715 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC3-205ENST00000462715 KANK1Q14678 1352 aa16.12■□□□□ 0.17
TRAPPC3-205ENST00000462715 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
TRAPPC3-205ENST00000462715 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-205ENST00000462715 MROH1Q8NDA8 1641 aa16.11■□□□□ 0.17
TRAPPC3-205ENST00000462715 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
TRAPPC3-205ENST00000462715 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-205ENST00000462715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAPPC3-205ENST00000462715 UNC13BO14795 1591 aa16.1■□□□□ 0.17
TRAPPC3-205ENST00000462715 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
TRAPPC3-205ENST00000462715 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
TRAPPC3-205ENST00000462715 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.17
TRAPPC3-205ENST00000462715 ABCC3O15438 1527 aa16.08■□□□□ 0.16
TRAPPC3-205ENST00000462715 PTPRMP28827 1452 aa16.08■□□□□ 0.16
TRAPPC3-205ENST00000462715 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
TRAPPC3-205ENST00000462715 NUP155O75694 1391 aa16.04■□□□□ 0.16
TRAPPC3-205ENST00000462715 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
TRAPPC3-205ENST00000462715 LMTK2Q8IWU2 1503 aa16.04■□□□□ 0.16
TRAPPC3-205ENST00000462715 CEP152O94986 1710 aa16.04■□□□□ 0.16
TRAPPC3-205ENST00000462715 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
TRAPPC3-205ENST00000462715 C3P01024 1663 aa16.03■□□□□ 0.16
TRAPPC3-205ENST00000462715 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
TRAPPC3-205ENST00000462715 RAB3GAP2Q9H2M9 1393 aa16.02■□□□□ 0.16
TRAPPC3-205ENST00000462715 MSH5O43196 834 aa16.02■□□□□ 0.16
TRAPPC3-205ENST00000462715 TRIM52Q96A61 297 aa16.02■□□□□ 0.15
TRAPPC3-205ENST00000462715 NEFLP07196 543 aa16.01■□□□□ 0.15
TRAPPC3-205ENST00000462715 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
TRAPPC3-205ENST00000462715 PZPP20742 1482 aa16■□□□□ 0.15
TRAPPC3-205ENST00000462715 TET3O43151 1660 aa16■□□□□ 0.15
TRAPPC3-205ENST00000462715 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
TRAPPC3-205ENST00000462715 EFCAB6Q5THR3 1501 aa16■□□□□ 0.15
TRAPPC3-205ENST00000462715 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC3-205ENST00000462715 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC3-205ENST00000462715 NPATQ14207 1427 aa15.98■□□□□ 0.15
TRAPPC3-205ENST00000462715 FKBP8Q14318 412 aa15.97■□□□□ 0.15
TRAPPC3-205ENST00000462715 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
TRAPPC3-205ENST00000462715 DEKP35659 375 aaKnown RBP15.95■□□□□ 0.14
TRAPPC3-205ENST00000462715 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
TRAPPC3-205ENST00000462715 ERVK-7P63135 1459 aa15.93■□□□□ 0.14
TRAPPC3-205ENST00000462715 SPATA31D1Q6ZQQ2 1576 aa15.93■□□□□ 0.14
TRAPPC3-205ENST00000462715 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC3-205ENST00000462715 UBE2Q2Q8WVN8 375 aa15.93■□□□□ 0.14
TRAPPC3-205ENST00000462715 PREX1Q8TCU6 1659 aa15.92■□□□□ 0.14
TRAPPC3-205ENST00000462715 TNRQ92752 1358 aa15.92■□□□□ 0.14
TRAPPC3-205ENST00000462715 E9PCH4 1651 aa15.92■□□□□ 0.14
TRAPPC3-205ENST00000462715 SETD1BQ9UPS6 1966 aaKnown RBP15.92■□□□□ 0.14
TRAPPC3-205ENST00000462715 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
TRAPPC3-205ENST00000462715 UHRF1BP1Q6BDS2 1440 aa15.9■□□□□ 0.14
TRAPPC3-205ENST00000462715 PKD2Q13563 968 aa15.89■□□□□ 0.13
TRAPPC3-205ENST00000462715 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
TRAPPC3-205ENST00000462715 NOS1P29475 1434 aa15.89■□□□□ 0.13
TRAPPC3-205ENST00000462715 MYO3AQ8NEV4 1616 aa15.88■□□□□ 0.13
TRAPPC3-205ENST00000462715 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
TRAPPC3-205ENST00000462715 SPHKAPQ2M3C7 1700 aa15.86■□□□□ 0.13
TRAPPC3-205ENST00000462715 SYNMO15061 1565 aa15.85■□□□□ 0.13
TRAPPC3-205ENST00000462715 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC3-205ENST00000462715 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
TRAPPC3-205ENST00000462715 PTPRTO14522 1441 aa15.84■□□□□ 0.13
TRAPPC3-205ENST00000462715 CEP170BQ9Y4F5 1589 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC3-205ENST00000462715 ZNF142P52746 1687 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC3-205ENST00000462715 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
TRAPPC3-205ENST00000462715 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
TRAPPC3-205ENST00000462715 LMTK3Q96Q04 1460 aa15.83■□□□□ 0.13
TRAPPC3-205ENST00000462715 BCANQ96GW7 911 aa15.83■□□□□ 0.12
TRAPPC3-205ENST00000462715 TRPM2O94759 1503 aa15.82■□□□□ 0.12
TRAPPC3-205ENST00000462715 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
TRAPPC3-205ENST00000462715 FOXD1Q16676 465 aa15.81■□□□□ 0.12
TRAPPC3-205ENST00000462715 PIK3C2BO00750 1634 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms