RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 AMOTL2Q9Y2J4 779 aa5.25□□□□□ -1.57
SMC4-203ENST00000462668 LOC105371045A0A1W2PR82 267 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 SLC34A2O95436 690 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 EN1Q05925 392 aaPredicted RBP5.24□□□□□ -1.57
SMC4-203ENST00000462668 MYSM1Q5VVJ2 828 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 PTCD2Q8WV60 388 aaKnown RBP5.24□□□□□ -1.57
SMC4-203ENST00000462668 PHF12Q96QT6 1004 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 ZNF777Q9ULD5 760 aaPredicted RBP5.24□□□□□ -1.57
SMC4-203ENST00000462668 PROCA1Q8NCQ7 364 aaPredicted RBP5.24□□□□□ -1.57
SMC4-203ENST00000462668 C2orf72A6NCS6 295 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 GJA5P36382 358 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 DPY19L2Q6NUT2 758 aa5.24□□□□□ -1.57
SMC4-203ENST00000462668 BMP2KQ9NSY1 1161 aaPredicted RBP5.24□□□□□ -1.57
SMC4-203ENST00000462668 GPR37L1O60883 481 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 PDE4CQ08493 712 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 TMEM92Q6UXU6 159 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 PIP4P2Q8N4L2 257 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 MS4A3Q96HJ5 214 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 NUTM2FA1L443 756 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 SSTR3P32745 418 aaPredicted RBP5.23□□□□□ -1.57
SMC4-203ENST00000462668 MTMR14Q8NCE2 650 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 MTMR7Q9Y216 660 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 USTQ9Y2C2 406 aa5.23□□□□□ -1.57
SMC4-203ENST00000462668 PHF14O94880 888 aa5.22□□□□□ -1.57
SMC4-203ENST00000462668 RFC5P40937 340 aa5.22□□□□□ -1.57
SMC4-203ENST00000462668 TMEM259Q4ZIN3 620 aa5.22□□□□□ -1.57
SMC4-203ENST00000462668 RBM27Q9P2N5 1060 aaKnown RBP5.22□□□□□ -1.57
SMC4-203ENST00000462668 TMC2Q8TDI7 906 aa5.22□□□□□ -1.57
SMC4-203ENST00000462668 C19orf67A6NJJ6 358 aa5.22□□□□□ -1.57
SMC4-203ENST00000462668 SNRKQ9NRH2 765 aa5.21□□□□□ -1.57
SMC4-203ENST00000462668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.21□□□□□ -1.579e-7■■■□□ 16.3
SMC4-203ENST00000462668 GRXCR2A6NFK2 248 aa5.21□□□□□ -1.58
SMC4-203ENST00000462668 BRD1O95696 1058 aa5.21□□□□□ -1.58
SMC4-203ENST00000462668 MFAP1P55081 439 aaKnown RBP5.21□□□□□ -1.58
SMC4-203ENST00000462668 IGSF3O75054 1194 aa5.21□□□□□ -1.58
SMC4-203ENST00000462668 TTLL12Q14166 644 aaPredicted RBP5.21□□□□□ -1.58
SMC4-203ENST00000462668 IER5LQ5T953 404 aa5.21□□□□□ -1.58
SMC4-203ENST00000462668 EPAS1Q99814 870 aa5.21□□□□□ -1.58
SMC4-203ENST00000462668 CDHR5Q9HBB8 845 aa5.2□□□□□ -1.58
SMC4-203ENST00000462668 EVI5O60447 810 aa5.2□□□□□ -1.58
SMC4-203ENST00000462668 ZRANB1Q9UGI0 708 aa5.2□□□□□ -1.58
SMC4-203ENST00000462668 MAP3K9P80192 1104 aa5.2□□□□□ -1.58
SMC4-203ENST00000462668 METTL3Q86U44 580 aaKnown RBP5.2□□□□□ -1.58
SMC4-203ENST00000462668 CCDC97Q96F63 343 aaPredicted RBP5.2□□□□□ -1.58
SMC4-203ENST00000462668 CFAP70Q5T0N1 1121 aa5.19□□□□□ -1.58
SMC4-203ENST00000462668 PXYLP1Q8TE99 480 aa5.19□□□□□ -1.58
SMC4-203ENST00000462668 RAD21O60216 631 aa5.19□□□□□ -1.58
SMC4-203ENST00000462668 GJD4Q96KN9 370 aaPredicted RBP5.19□□□□□ -1.58
SMC4-203ENST00000462668 SPTLC1O15269 473 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 BEGAINQ9BUH8 593 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 BOLA1Q9Y3E2 137 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 ADGRG1Q9Y653 693 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 CLK2P49760 499 aaKnown RBP5.18□□□□□ -1.58
SMC4-203ENST00000462668 ADAMTS19Q8TE59 1207 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
SMC4-203ENST00000462668 CD44P16070 742 aaKnown RBP5.17□□□□□ -1.58
SMC4-203ENST00000462668 GNEQ9Y223 722 aaKnown RBP5.17□□□□□ -1.58
SMC4-203ENST00000462668 TMEM88BA6NKF7 163 aa5.17□□□□□ -1.58
SMC4-203ENST00000462668 GOLGA2Q08379 1002 aa5.17□□□□□ -1.58
SMC4-203ENST00000462668 TBC1D2Q9BYX2 928 aa5.17□□□□□ -1.58
SMC4-203ENST00000462668 ASTLQ6HA08 431 aaPredicted RBP5.16□□□□□ -1.58
SMC4-203ENST00000462668 PBXIP1Q96AQ6 731 aa5.16□□□□□ -1.58
SMC4-203ENST00000462668 LIMD1Q9UGP4 676 aa5.16□□□□□ -1.58
SMC4-203ENST00000462668 LILRB3O75022 631 aa5.16□□□□□ -1.58
SMC4-203ENST00000462668 GZF1Q9H116 711 aaPredicted RBP5.16□□□□□ -1.58
SMC4-203ENST00000462668 ZNF330Q9Y3S2 320 aaPredicted RBP5.16□□□□□ -1.58
SMC4-203ENST00000462668 CLCN6P51797 869 aa5.16□□□□□ -1.58
SMC4-203ENST00000462668 DDX12PQ92771 950 aa5.16□□□□□ -1.58
SMC4-203ENST00000462668 OATP04181 439 aa5.15□□□□□ -1.58
SMC4-203ENST00000462668 MDM2Q00987 491 aaPredicted RBP5.15□□□□□ -1.58
SMC4-203ENST00000462668 DIXDC1Q155Q3 683 aa5.15□□□□□ -1.58
SMC4-203ENST00000462668 GLMNQ92990 594 aa5.15□□□□□ -1.59
SMC4-203ENST00000462668 POM121CA8CG34 1229 aa5.15□□□□□ -1.59
SMC4-203ENST00000462668 OCEL1Q9H607 264 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 TRIM35Q9UPQ4 493 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 CD46P15529 392 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 CERKQ8TCT0 537 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 SPIRE2Q8WWL2 714 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 PCDHGA10Q9Y5H3 936 aa5.14□□□□□ -1.59
SMC4-203ENST00000462668 RSBN1LQ6PCB5 846 aaPredicted RBP5.14□□□□□ -1.59
SMC4-203ENST00000462668 SHROOM4Q9ULL8 1493 aa5.13□□□□□ -1.59
SMC4-203ENST00000462668 PRPF38BQ5VTL8 546 aaKnown RBP5.13□□□□□ -1.59
SMC4-203ENST00000462668 ZNF428Q96B54 188 aa5.13□□□□□ -1.59
SMC4-203ENST00000462668 ALG2Q9H553 416 aa5.13□□□□□ -1.59
SMC4-203ENST00000462668 ELOAQ14241 798 aaKnown RBP5.13□□□□□ -1.59
SMC4-203ENST00000462668 RIC3Q7Z5B4 369 aa5.12□□□□□ -1.59
SMC4-203ENST00000462668 RBM47A0AV96 593 aaKnown RBP5.12□□□□□ -1.59
SMC4-203ENST00000462668 SND1Q7KZF4 910 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMC4-203ENST00000462668 EYA1Q99502 592 aa5.12□□□□□ -1.59
SMC4-203ENST00000462668 JPH4Q96JJ6 628 aa5.12□□□□□ -1.59
SMC4-203ENST00000462668 ATMINO43313 823 aaPredicted RBP5.12□□□□□ -1.59
SMC4-203ENST00000462668 ATG7O95352 703 aa5.12□□□□□ -1.59
SMC4-203ENST00000462668 FOXD4L5Q5VV16 416 aaPredicted RBP5.11□□□□□ -1.59
SMC4-203ENST00000462668 AEBP1Q8IUX7 1158 aa5.11□□□□□ -1.59
SMC4-203ENST00000462668 FOXD4L4Q8WXT5 416 aaPredicted RBP5.11□□□□□ -1.59
SMC4-203ENST00000462668 TSR1Q2NL82 804 aaKnown RBP5.11□□□□□ -1.59
SMC4-203ENST00000462668 FBXW7Q969H0 707 aa5.11□□□□□ -1.59
SMC4-203ENST00000462668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.1□□□□□ -1.59
SMC4-203ENST00000462668 TYW1BQ6NUM6 668 aa5.1□□□□□ -1.59
SMC4-203ENST00000462668 GDPD2Q9HCC8 539 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms