RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 ZNF142P52746 1687 aaPredicted RBP16.07■□□□□ 0.16
HDLBP-230ENST00000462130 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
HDLBP-230ENST00000462130 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
HDLBP-230ENST00000462130 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
HDLBP-230ENST00000462130 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-230ENST00000462130 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
HDLBP-230ENST00000462130 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
HDLBP-230ENST00000462130 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
HDLBP-230ENST00000462130 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
HDLBP-230ENST00000462130 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
HDLBP-230ENST00000462130 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
HDLBP-230ENST00000462130 KIF3BO15066 747 aa16.01■□□□□ 0.15
HDLBP-230ENST00000462130 PKD2Q13563 968 aa16.01■□□□□ 0.15
HDLBP-230ENST00000462130 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
HDLBP-230ENST00000462130 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
HDLBP-230ENST00000462130 PLA2R1Q13018 1463 aa16■□□□□ 0.15
HDLBP-230ENST00000462130 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
HDLBP-230ENST00000462130 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
HDLBP-230ENST00000462130 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
HDLBP-230ENST00000462130 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
HDLBP-230ENST00000462130 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
HDLBP-230ENST00000462130 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
HDLBP-230ENST00000462130 ZNF335Q9H4Z2 1342 aaPredicted RBP15.96■□□□□ 0.15
HDLBP-230ENST00000462130 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
HDLBP-230ENST00000462130 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.15
HDLBP-230ENST00000462130 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.14
HDLBP-230ENST00000462130 WASHC2CQ9Y4E1 1318 aa15.95■□□□□ 0.14
HDLBP-230ENST00000462130 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
HDLBP-230ENST00000462130 TNRQ92752 1358 aa15.94■□□□□ 0.14
HDLBP-230ENST00000462130 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
HDLBP-230ENST00000462130 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
HDLBP-230ENST00000462130 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
HDLBP-230ENST00000462130 PZPP20742 1482 aa15.92■□□□□ 0.14
HDLBP-230ENST00000462130 UBAP1LF5GYI3 381 aa15.92■□□□□ 0.14
HDLBP-230ENST00000462130 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
HDLBP-230ENST00000462130 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
HDLBP-230ENST00000462130 MAST1Q9Y2H9 1570 aa15.88■□□□□ 0.13
HDLBP-230ENST00000462130 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
HDLBP-230ENST00000462130 ZC3H13Q5T200 1668 aaKnown RBP15.87■□□□□ 0.13
HDLBP-230ENST00000462130 ILDR2Q71H61 639 aa15.87■□□□□ 0.13
HDLBP-230ENST00000462130 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
HDLBP-230ENST00000462130 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
HDLBP-230ENST00000462130 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
HDLBP-230ENST00000462130 NLRP1Q9C000 1473 aa15.86■□□□□ 0.13
HDLBP-230ENST00000462130 MAP3K1Q13233 1512 aa15.86■□□□□ 0.13
HDLBP-230ENST00000462130 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-230ENST00000462130 NEURL4Q96JN8 1562 aa15.86■□□□□ 0.13
HDLBP-230ENST00000462130 UGGT1Q9NYU2 1555 aa15.86■□□□□ 0.13
HDLBP-230ENST00000462130 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
HDLBP-230ENST00000462130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■□□□□ 8.8
HDLBP-230ENST00000462130 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
HDLBP-230ENST00000462130 CEP152O94986 1710 aa15.84■□□□□ 0.13
HDLBP-230ENST00000462130 ABCC3O15438 1527 aa15.83■□□□□ 0.12
HDLBP-230ENST00000462130 CPS1P31327 1500 aa15.83■□□□□ 0.12
HDLBP-230ENST00000462130 APLP2Q06481 763 aa15.82■□□□□ 0.12
HDLBP-230ENST00000462130 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
HDLBP-230ENST00000462130 DEPDC5O75140 1603 aa15.81■□□□□ 0.12
HDLBP-230ENST00000462130 IQGAP1P46940 1657 aa15.8■□□□□ 0.12
HDLBP-230ENST00000462130 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
HDLBP-230ENST00000462130 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-230ENST00000462130 SOCS7O14512 581 aa15.8■□□□□ 0.12
HDLBP-230ENST00000462130 TOM1O60784 492 aa15.8■□□□□ 0.12
HDLBP-230ENST00000462130 PIP4K2BP78356 416 aa15.79■□□□□ 0.12
HDLBP-230ENST00000462130 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
HDLBP-230ENST00000462130 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
HDLBP-230ENST00000462130 MED14O60244 1454 aa15.78■□□□□ 0.12
HDLBP-230ENST00000462130 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
HDLBP-230ENST00000462130 VWDEQ8N2E2 1590 aa15.78■□□□□ 0.12
HDLBP-230ENST00000462130 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.12
HDLBP-230ENST00000462130 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
HDLBP-230ENST00000462130 KIF15Q9NS87 1388 aa15.75■□□□□ 0.11
HDLBP-230ENST00000462130 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-230ENST00000462130 RRP7BPQ9NSQ0 103 aa15.74■□□□□ 0.11
HDLBP-230ENST00000462130 HSPA1LP34931 641 aa15.73■□□□□ 0.11
HDLBP-230ENST00000462130 ABCC5O15440 1437 aa15.73■□□□□ 0.11
HDLBP-230ENST00000462130 ERBINQ96RT1 1412 aa15.73■□□□□ 0.11
HDLBP-230ENST00000462130 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
HDLBP-230ENST00000462130 PRDM15P57071 1507 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-230ENST00000462130 DAPK1P53355 1430 aa15.71■□□□□ 0.11
HDLBP-230ENST00000462130 KANK1Q14678 1352 aa15.7■□□□□ 0.1
HDLBP-230ENST00000462130 ARHGAP31Q2M1Z3 1444 aa15.69■□□□□ 0.1
HDLBP-230ENST00000462130 SCAF11Q99590 1463 aaKnown RBP15.69■□□□□ 0.1
HDLBP-230ENST00000462130 SYNMO15061 1565 aa15.69■□□□□ 0.1
HDLBP-230ENST00000462130 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
HDLBP-230ENST00000462130 TXNDC2Q86VQ3 553 aa15.68■□□□□ 0.1
HDLBP-230ENST00000462130 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
HDLBP-230ENST00000462130 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
HDLBP-230ENST00000462130 PIK3C2BO00750 1634 aa15.68■□□□□ 0.1
HDLBP-230ENST00000462130 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
HDLBP-230ENST00000462130 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
HDLBP-230ENST00000462130 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
HDLBP-230ENST00000462130 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
HDLBP-230ENST00000462130 LTKP29376 864 aa15.66■□□□□ 0.1
HDLBP-230ENST00000462130 SLIT1O75093 1534 aa15.66■□□□□ 0.1
HDLBP-230ENST00000462130 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
HDLBP-230ENST00000462130 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
HDLBP-230ENST00000462130 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
HDLBP-230ENST00000462130 KCNA4P22459 653 aa15.62■□□□□ 0.09
HDLBP-230ENST00000462130 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
HDLBP-230ENST00000462130 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms