RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 NPATQ14207 1427 aa15.67■□□□□ 0.1
SPTAN1-204ENST00000461855 ERBINQ96RT1 1412 aa15.67■□□□□ 0.1
SPTAN1-204ENST00000461855 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
SPTAN1-204ENST00000461855 PPARGC1BQ86YN6 1023 aaKnown RBP15.66■□□□□ 0.1
SPTAN1-204ENST00000461855 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
SPTAN1-204ENST00000461855 PTPRKQ15262 1439 aa15.66■□□□□ 0.1
SPTAN1-204ENST00000461855 RNF17Q9BXT8 1623 aaKnown RBP15.65■□□□□ 0.1
SPTAN1-204ENST00000461855 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
SPTAN1-204ENST00000461855 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
SPTAN1-204ENST00000461855 KDM5DQ9BY66 1539 aa15.63■□□□□ 0.09
SPTAN1-204ENST00000461855 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
SPTAN1-204ENST00000461855 CHIC2Q9UKJ5 165 aa15.63■□□□□ 0.09
SPTAN1-204ENST00000461855 MROH1Q8NDA8 1641 aa15.63■□□□□ 0.09
SPTAN1-204ENST00000461855 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
SPTAN1-204ENST00000461855 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
SPTAN1-204ENST00000461855 PREX1Q8TCU6 1659 aa15.6■□□□□ 0.09
SPTAN1-204ENST00000461855 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
SPTAN1-204ENST00000461855 PZPP20742 1482 aa15.59■□□□□ 0.09
SPTAN1-204ENST00000461855 ABCC3O15438 1527 aa15.59■□□□□ 0.09
SPTAN1-204ENST00000461855 PRDM15P57071 1507 aaPredicted RBP15.58■□□□□ 0.09
SPTAN1-204ENST00000461855 DEPDC5O75140 1603 aa15.58■□□□□ 0.09
SPTAN1-204ENST00000461855 HSPA2P54652 639 aa15.58■□□□□ 0.08
SPTAN1-204ENST00000461855 ANKRD50Q9ULJ7 1429 aa15.57■□□□□ 0.08
SPTAN1-204ENST00000461855 ARHGAP31Q2M1Z3 1444 aa15.56■□□□□ 0.08
SPTAN1-204ENST00000461855 VWDEQ8N2E2 1590 aa15.56■□□□□ 0.08
SPTAN1-204ENST00000461855 ZC3H13Q5T200 1668 aaKnown RBP15.56■□□□□ 0.08
SPTAN1-204ENST00000461855 FBXO31Q5XUX0 539 aaPredicted RBP15.55■□□□□ 0.08
SPTAN1-204ENST00000461855 LMTK2Q8IWU2 1503 aa15.54■□□□□ 0.08
SPTAN1-204ENST00000461855 TNRQ92752 1358 aa15.51■□□□□ 0.07
SPTAN1-204ENST00000461855 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
SPTAN1-204ENST00000461855 ZNF142P52746 1687 aaPredicted RBP15.5■□□□□ 0.07
SPTAN1-204ENST00000461855 MYO3AQ8NEV4 1616 aa15.5■□□□□ 0.07
SPTAN1-204ENST00000461855 KANK1Q14678 1352 aa15.49■□□□□ 0.07
SPTAN1-204ENST00000461855 A2ML1A8K2U0 1454 aa15.49■□□□□ 0.07
SPTAN1-204ENST00000461855 ERVK-7P63135 1459 aa15.49■□□□□ 0.07
SPTAN1-204ENST00000461855 CAMSAP1Q5T5Y3 1602 aa15.49■□□□□ 0.07
SPTAN1-204ENST00000461855 CEP170BQ9Y4F5 1589 aaPredicted RBP15.49■□□□□ 0.07
SPTAN1-204ENST00000461855 NLRP1Q9C000 1473 aa15.48■□□□□ 0.07
SPTAN1-204ENST00000461855 ITGAEP38570 1179 aa15.48■□□□□ 0.07
SPTAN1-204ENST00000461855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.073e-7■■■□□ 16.8
SPTAN1-204ENST00000461855 CEP152O94986 1710 aa15.48■□□□□ 0.07
SPTAN1-204ENST00000461855 PLA2R1Q13018 1463 aa15.47■□□□□ 0.07
SPTAN1-204ENST00000461855 STRCQ7RTU9 1775 aa15.47■□□□□ 0.07
SPTAN1-204ENST00000461855 UNC13BO14795 1591 aa15.46■□□□□ 0.07
SPTAN1-204ENST00000461855 NAIPQ13075 1403 aa15.45■□□□□ 0.06
SPTAN1-204ENST00000461855 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
SPTAN1-204ENST00000461855 PTPRTO14522 1441 aa15.44■□□□□ 0.06
SPTAN1-204ENST00000461855 NOS1P29475 1434 aa15.43■□□□□ 0.06
SPTAN1-204ENST00000461855 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
SPTAN1-204ENST00000461855 RPRD2Q5VT52 1461 aaKnown RBP15.43■□□□□ 0.06
SPTAN1-204ENST00000461855 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
SPTAN1-204ENST00000461855 PKD2Q13563 968 aa15.42■□□□□ 0.06
SPTAN1-204ENST00000461855 THEMISQ8N1K5 641 aaPredicted RBP15.4■□□□□ 0.06
SPTAN1-204ENST00000461855 UGGT1Q9NYU2 1555 aa15.4■□□□□ 0.06
SPTAN1-204ENST00000461855 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
SPTAN1-204ENST00000461855 NUP155O75694 1391 aa15.39■□□□□ 0.05
SPTAN1-204ENST00000461855 TET3O43151 1660 aa15.39■□□□□ 0.05
SPTAN1-204ENST00000461855 NCKAP5LQ9HCH0 1330 aa15.39■□□□□ 0.05
SPTAN1-204ENST00000461855 IDI1Q13907 227 aa15.37■□□□□ 0.05
SPTAN1-204ENST00000461855 SLC52A1Q9NWF4 448 aa15.37■□□□□ 0.05
SPTAN1-204ENST00000461855 SYNMO15061 1565 aa15.36■□□□□ 0.05
SPTAN1-204ENST00000461855 GCC2Q8IWJ2 1684 aa15.36■□□□□ 0.05
SPTAN1-204ENST00000461855 CFAP65Q6ZU64 1925 aaKnown RBP15.35■□□□□ 0.05
SPTAN1-204ENST00000461855 MED14O60244 1454 aa15.35■□□□□ 0.05
SPTAN1-204ENST00000461855 ARHGAP23Q9P227 1491 aa15.34■□□□□ 0.05
SPTAN1-204ENST00000461855 ANKLE2Q86XL3 938 aa15.34■□□□□ 0.05
SPTAN1-204ENST00000461855 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
SPTAN1-204ENST00000461855 UBR1Q8IWV7 1749 aa15.34■□□□□ 0.05
SPTAN1-204ENST00000461855 SLIT1O75093 1534 aa15.33■□□□□ 0.05
SPTAN1-204ENST00000461855 NEURL4Q96JN8 1562 aa15.33■□□□□ 0.05
SPTAN1-204ENST00000461855 E9PCH4 1651 aa15.32■□□□□ 0.04
SPTAN1-204ENST00000461855 PIK3C2BO00750 1634 aa15.31■□□□□ 0.04
SPTAN1-204ENST00000461855 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
SPTAN1-204ENST00000461855 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
SPTAN1-204ENST00000461855 LTKP29376 864 aa15.29■□□□□ 0.04
SPTAN1-204ENST00000461855 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
SPTAN1-204ENST00000461855 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
SPTAN1-204ENST00000461855 NPHP4O75161 1426 aaPredicted RBP15.27■□□□□ 0.04
SPTAN1-204ENST00000461855 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.04
SPTAN1-204ENST00000461855 ADGRB3O60242 1522 aa15.27■□□□□ 0.03
SPTAN1-204ENST00000461855 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.03
SPTAN1-204ENST00000461855 TXNDC2Q86VQ3 553 aa15.25■□□□□ 0.03
SPTAN1-204ENST00000461855 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
SPTAN1-204ENST00000461855 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
SPTAN1-204ENST00000461855 ZNF335Q9H4Z2 1342 aaPredicted RBP15.24■□□□□ 0.03
SPTAN1-204ENST00000461855 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
SPTAN1-204ENST00000461855 ZFYVE9O95405 1425 aa15.24■□□□□ 0.03
SPTAN1-204ENST00000461855 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
SPTAN1-204ENST00000461855 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
SPTAN1-204ENST00000461855 HRCP23327 699 aa15.22■□□□□ 0.03
SPTAN1-204ENST00000461855 FBXO41Q8TF61 875 aa15.22■□□□□ 0.03
SPTAN1-204ENST00000461855 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
SPTAN1-204ENST00000461855 IQSEC2Q5JU85 1478 aa15.21■□□□□ 0.03
SPTAN1-204ENST00000461855 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
SPTAN1-204ENST00000461855 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
SPTAN1-204ENST00000461855 TRPM2O94759 1503 aa15.21■□□□□ 0.03
SPTAN1-204ENST00000461855 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
SPTAN1-204ENST00000461855 MPHOSPH9Q99550 1183 aa15.19■□□□□ 0.02
SPTAN1-204ENST00000461855 HDGFP51858 240 aaKnown RBP15.18■□□□□ 0.02
SPTAN1-204ENST00000461855 RAB3GAP2Q9H2M9 1393 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms