RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
BRCA1-207ENST00000461798 FBXO41Q8TF61 875 aa14.44□□□□□ -0.1
BRCA1-207ENST00000461798 C3P01024 1663 aa14.43□□□□□ -0.1
BRCA1-207ENST00000461798 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
BRCA1-207ENST00000461798 DSG3P32926 999 aa14.42□□□□□ -0.1
BRCA1-207ENST00000461798 ARHGEF5Q12774 1597 aa14.42□□□□□ -0.1
BRCA1-207ENST00000461798 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
BRCA1-207ENST00000461798 MROH2AA6NES4 1674 aa14.41□□□□□ -0.1
BRCA1-207ENST00000461798 MYOM3Q5VTT5 1437 aa14.41□□□□□ -0.1
BRCA1-207ENST00000461798 KIF3BO15066 747 aa14.4□□□□□ -0.1
BRCA1-207ENST00000461798 APLP2Q06481 763 aa14.4□□□□□ -0.1
BRCA1-207ENST00000461798 PTPRKQ15262 1439 aa14.39□□□□□ -0.11
BRCA1-207ENST00000461798 PTPRTO14522 1441 aa14.37□□□□□ -0.11
BRCA1-207ENST00000461798 CERKQ8TCT0 537 aa14.36□□□□□ -0.11
BRCA1-207ENST00000461798 FAM135AQ9P2D6 1515 aa14.35□□□□□ -0.11
BRCA1-207ENST00000461798 MAST1Q9Y2H9 1570 aa14.34□□□□□ -0.11
BRCA1-207ENST00000461798 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
BRCA1-207ENST00000461798 NCOA1Q15788 1441 aa14.34□□□□□ -0.11
BRCA1-207ENST00000461798 CLTCQ00610 1675 aaKnown RBP14.34□□□□□ -0.11
BRCA1-207ENST00000461798 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
BRCA1-207ENST00000461798 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-207ENST00000461798 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-207ENST00000461798 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-207ENST00000461798 PKD2Q13563 968 aa14.3□□□□□ -0.12
BRCA1-207ENST00000461798 ABCC5O15440 1437 aa14.3□□□□□ -0.12
BRCA1-207ENST00000461798 PZPP20742 1482 aa14.3□□□□□ -0.12
BRCA1-207ENST00000461798 KDM5DQ9BY66 1539 aa14.3□□□□□ -0.12
BRCA1-207ENST00000461798 CAPN15O75808 1086 aa14.29□□□□□ -0.12
BRCA1-207ENST00000461798 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
BRCA1-207ENST00000461798 PLA2R1Q13018 1463 aa14.29□□□□□ -0.12
BRCA1-207ENST00000461798 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
BRCA1-207ENST00000461798 CAMSAP1Q5T5Y3 1602 aa14.28□□□□□ -0.12
BRCA1-207ENST00000461798 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
BRCA1-207ENST00000461798 TNRQ92752 1358 aa14.28□□□□□ -0.12
BRCA1-207ENST00000461798 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
BRCA1-207ENST00000461798 A2ML1A8K2U0 1454 aa14.27□□□□□ -0.12
BRCA1-207ENST00000461798 SHANK2Q9UPX8 1470 aa14.27□□□□□ -0.12
BRCA1-207ENST00000461798 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-207ENST00000461798 DUOX2Q9NRD8 1548 aa14.26□□□□□ -0.13
BRCA1-207ENST00000461798 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-207ENST00000461798 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
BRCA1-207ENST00000461798 DAPK1P53355 1430 aa14.25□□□□□ -0.13
BRCA1-207ENST00000461798 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
BRCA1-207ENST00000461798 RNF17Q9BXT8 1623 aaKnown RBP14.25□□□□□ -0.13
BRCA1-207ENST00000461798 PTPN23Q9H3S7 1636 aa14.25□□□□□ -0.13
BRCA1-207ENST00000461798 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
BRCA1-207ENST00000461798 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
BRCA1-207ENST00000461798 ABCC3O15438 1527 aa14.24□□□□□ -0.13
BRCA1-207ENST00000461798 THEMISQ8N1K5 641 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-207ENST00000461798 ERBINQ96RT1 1412 aa14.23□□□□□ -0.13
BRCA1-207ENST00000461798 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
BRCA1-207ENST00000461798 NLRP1Q9C000 1473 aa14.22□□□□□ -0.13
BRCA1-207ENST00000461798 DNMT1P26358 1616 aaKnown RBP14.22□□□□□ -0.13
BRCA1-207ENST00000461798 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.13
BRCA1-207ENST00000461798 ANKRD30AQ9BXX3 1397 aa14.21□□□□□ -0.14
BRCA1-207ENST00000461798 ARHGAP31Q2M1Z3 1444 aa14.2□□□□□ -0.14
BRCA1-207ENST00000461798 IQSEC2Q5JU85 1478 aa14.19□□□□□ -0.14
BRCA1-207ENST00000461798 ANKLE2Q86XL3 938 aa14.19□□□□□ -0.14
BRCA1-207ENST00000461798 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
BRCA1-207ENST00000461798 SPATA31D1Q6ZQQ2 1576 aa14.18□□□□□ -0.14
BRCA1-207ENST00000461798 ZC3H13Q5T200 1668 aaKnown RBP14.18□□□□□ -0.14
BRCA1-207ENST00000461798 ERVK-7P63135 1459 aa14.18□□□□□ -0.14
BRCA1-207ENST00000461798 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-207ENST00000461798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.14
BRCA1-207ENST00000461798 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
BRCA1-207ENST00000461798 CROCC2H7BZ55 1655 aa14.17□□□□□ -0.14
BRCA1-207ENST00000461798 PRDM15P57071 1507 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-207ENST00000461798 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
BRCA1-207ENST00000461798 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
BRCA1-207ENST00000461798 UGGT1Q9NYU2 1555 aa14.15□□□□□ -0.14
BRCA1-207ENST00000461798 KANK1Q14678 1352 aa14.15□□□□□ -0.14
BRCA1-207ENST00000461798 MED14O60244 1454 aa14.14□□□□□ -0.15
BRCA1-207ENST00000461798 LMTK2Q8IWU2 1503 aa14.13□□□□□ -0.15
BRCA1-207ENST00000461798 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
BRCA1-207ENST00000461798 VWDEQ8N2E2 1590 aa14.12□□□□□ -0.15
BRCA1-207ENST00000461798 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
BRCA1-207ENST00000461798 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-207ENST00000461798 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
BRCA1-207ENST00000461798 CEP152O94986 1710 aa14.1□□□□□ -0.15
BRCA1-207ENST00000461798 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
BRCA1-207ENST00000461798 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
BRCA1-207ENST00000461798 LTKP29376 864 aa14.07□□□□□ -0.16
BRCA1-207ENST00000461798 IDI1Q13907 227 aa14.07□□□□□ -0.16
BRCA1-207ENST00000461798 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
BRCA1-207ENST00000461798 NOS1P29475 1434 aa14.07□□□□□ -0.16
BRCA1-207ENST00000461798 CPS1P31327 1500 aa14.06□□□□□ -0.16
BRCA1-207ENST00000461798 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
BRCA1-207ENST00000461798 TXNDC2Q86VQ3 553 aa14.06□□□□□ -0.16
BRCA1-207ENST00000461798 SLC52A1Q9NWF4 448 aa14.06□□□□□ -0.16
BRCA1-207ENST00000461798 SLIT1O75093 1534 aa14.05□□□□□ -0.16
BRCA1-207ENST00000461798 UBR1Q8IWV7 1749 aa14.04□□□□□ -0.16
BRCA1-207ENST00000461798 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
BRCA1-207ENST00000461798 TMEM2Q9UHN6 1383 aa14.04□□□□□ -0.16
BRCA1-207ENST00000461798 SCAF11Q99590 1463 aaKnown RBP14.04□□□□□ -0.16
BRCA1-207ENST00000461798 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
BRCA1-207ENST00000461798 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
BRCA1-207ENST00000461798 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
BRCA1-207ENST00000461798 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
BRCA1-207ENST00000461798 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
BRCA1-207ENST00000461798 TOM1O60784 492 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms