RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
SPTA1-202ENST00000461624 ANKRD13DQ6ZTN6 518 aa10.57□□□□□ -0.72
SPTA1-202ENST00000461624 PDE4AP27815 886 aa10.55□□□□□ -0.72
SPTA1-202ENST00000461624 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
SPTA1-202ENST00000461624 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■■■ 34.4
SPTA1-202ENST00000461624 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
SPTA1-202ENST00000461624 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
SPTA1-202ENST00000461624 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
SPTA1-202ENST00000461624 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
SPTA1-202ENST00000461624 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
SPTA1-202ENST00000461624 TOP2AP11388 1531 aaKnown RBP10.5□□□□□ -0.73
SPTA1-202ENST00000461624 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
SPTA1-202ENST00000461624 DNMBPQ6XZF7 1577 aa10.5□□□□□ -0.73
SPTA1-202ENST00000461624 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPTA1-202ENST00000461624 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
SPTA1-202ENST00000461624 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
SPTA1-202ENST00000461624 MFSD10Q14728 455 aa10.47□□□□□ -0.73
SPTA1-202ENST00000461624 GAPVD1Q14C86 1478 aa10.46□□□□□ -0.74
SPTA1-202ENST00000461624 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
SPTA1-202ENST00000461624 TK2O00142 265 aa10.45□□□□□ -0.74
SPTA1-202ENST00000461624 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
SPTA1-202ENST00000461624 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
SPTA1-202ENST00000461624 POLA1P09884 1462 aaPredicted RBP10.44□□□□□ -0.74
SPTA1-202ENST00000461624 KCNH8Q96L42 1107 aa10.44□□□□□ -0.74
SPTA1-202ENST00000461624 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
SPTA1-202ENST00000461624 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
SPTA1-202ENST00000461624 PSEN2P49810 448 aa10.41□□□□□ -0.74
SPTA1-202ENST00000461624 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
SPTA1-202ENST00000461624 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
SPTA1-202ENST00000461624 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
SPTA1-202ENST00000461624 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
SPTA1-202ENST00000461624 MAGI1Q96QZ7 1491 aaPredicted RBP10.4□□□□□ -0.74
SPTA1-202ENST00000461624 RAD54L2Q9Y4B4 1467 aa10.39□□□□□ -0.75
SPTA1-202ENST00000461624 FOSBP53539 338 aa10.39□□□□□ -0.75
SPTA1-202ENST00000461624 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
SPTA1-202ENST00000461624 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
SPTA1-202ENST00000461624 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
SPTA1-202ENST00000461624 EVI5O60447 810 aa10.38□□□□□ -0.75
SPTA1-202ENST00000461624 KCNK17Q96T54 332 aa10.38□□□□□ -0.75
SPTA1-202ENST00000461624 ERCC6L2Q5T890 1561 aa10.38□□□□□ -0.75
SPTA1-202ENST00000461624 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
SPTA1-202ENST00000461624 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
SPTA1-202ENST00000461624 HRO43593 1189 aa10.37□□□□□ -0.75
SPTA1-202ENST00000461624 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
SPTA1-202ENST00000461624 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
SPTA1-202ENST00000461624 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
SPTA1-202ENST00000461624 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
SPTA1-202ENST00000461624 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
SPTA1-202ENST00000461624 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
SPTA1-202ENST00000461624 PTPREP23469 700 aa10.32□□□□□ -0.76
SPTA1-202ENST00000461624 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
SPTA1-202ENST00000461624 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
SPTA1-202ENST00000461624 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
SPTA1-202ENST00000461624 SOGA1O94964 1423 aa10.32□□□□□ -0.76
SPTA1-202ENST00000461624 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
SPTA1-202ENST00000461624 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
SPTA1-202ENST00000461624 VPS9D1Q9Y2B5 631 aa10.31□□□□□ -0.76
SPTA1-202ENST00000461624 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
SPTA1-202ENST00000461624 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
SPTA1-202ENST00000461624 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
SPTA1-202ENST00000461624 FGD5Q6ZNL6 1462 aa10.28□□□□□ -0.76
SPTA1-202ENST00000461624 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
SPTA1-202ENST00000461624 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
SPTA1-202ENST00000461624 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
SPTA1-202ENST00000461624 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
SPTA1-202ENST00000461624 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
SPTA1-202ENST00000461624 FBXW7Q969H0 707 aa10.25□□□□□ -0.77
SPTA1-202ENST00000461624 PCDHGA10Q9Y5H3 936 aa10.25□□□□□ -0.77
SPTA1-202ENST00000461624 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
SPTA1-202ENST00000461624 PHF14O94880 888 aa10.24□□□□□ -0.77
SPTA1-202ENST00000461624 NUP160Q12769 1436 aa10.24□□□□□ -0.77
SPTA1-202ENST00000461624 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
SPTA1-202ENST00000461624 KDM6BO15054 1643 aa10.23□□□□□ -0.77
SPTA1-202ENST00000461624 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
SPTA1-202ENST00000461624 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
SPTA1-202ENST00000461624 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
SPTA1-202ENST00000461624 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
SPTA1-202ENST00000461624 CUX1P39880 1505 aa10.23□□□□□ -0.77
SPTA1-202ENST00000461624 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
SPTA1-202ENST00000461624 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
SPTA1-202ENST00000461624 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
SPTA1-202ENST00000461624 DPYSL4O14531 572 aa10.21□□□□□ -0.77
SPTA1-202ENST00000461624 EPAS1Q99814 870 aa10.2□□□□□ -0.78
SPTA1-202ENST00000461624 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
SPTA1-202ENST00000461624 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
SPTA1-202ENST00000461624 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
SPTA1-202ENST00000461624 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
SPTA1-202ENST00000461624 ADGRL1O94910 1474 aa10.17□□□□□ -0.78
SPTA1-202ENST00000461624 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
SPTA1-202ENST00000461624 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
SPTA1-202ENST00000461624 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
SPTA1-202ENST00000461624 PDIA6Q15084 440 aa10.15□□□□□ -0.78
SPTA1-202ENST00000461624 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.78
SPTA1-202ENST00000461624 COL9A1P20849 921 aa10.14□□□□□ -0.79
SPTA1-202ENST00000461624 THSD4Q6ZMP0 1018 aa10.14□□□□□ -0.79
SPTA1-202ENST00000461624 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
SPTA1-202ENST00000461624 ADCY10Q96PN6 1610 aa10.14□□□□□ -0.79
SPTA1-202ENST00000461624 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
SPTA1-202ENST00000461624 WNT2BQ93097 391 aa10.13□□□□□ -0.79
SPTA1-202ENST00000461624 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms