RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
SSBP1-202ENST00000461433 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.32
SSBP1-202ENST00000461433 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
SSBP1-202ENST00000461433 GGT6Q6P531 493 aa17.01■□□□□ 0.31
SSBP1-202ENST00000461433 MADDQ8WXG6 1647 aa17■□□□□ 0.31
SSBP1-202ENST00000461433 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
SSBP1-202ENST00000461433 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
SSBP1-202ENST00000461433 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
SSBP1-202ENST00000461433 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
SSBP1-202ENST00000461433 UNC13BO14795 1591 aa16.96■□□□□ 0.31
SSBP1-202ENST00000461433 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
SSBP1-202ENST00000461433 CLTCQ00610 1675 aaKnown RBP16.95■□□□□ 0.3
SSBP1-202ENST00000461433 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
SSBP1-202ENST00000461433 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
SSBP1-202ENST00000461433 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
SSBP1-202ENST00000461433 FAM135AQ9P2D6 1515 aa16.93■□□□□ 0.3
SSBP1-202ENST00000461433 CEP152O94986 1710 aa16.92■□□□□ 0.3
SSBP1-202ENST00000461433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP1-202ENST00000461433 ABCC3O15438 1527 aa16.92■□□□□ 0.3
SSBP1-202ENST00000461433 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
SSBP1-202ENST00000461433 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
SSBP1-202ENST00000461433 CNTLNQ9NXG0 1405 aa16.91■□□□□ 0.3
SSBP1-202ENST00000461433 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
SSBP1-202ENST00000461433 PTPRMP28827 1452 aa16.9■□□□□ 0.3
SSBP1-202ENST00000461433 C3P01024 1663 aa16.9■□□□□ 0.3
SSBP1-202ENST00000461433 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.29
SSBP1-202ENST00000461433 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
SSBP1-202ENST00000461433 IQGAP3Q86VI3 1631 aa16.89■□□□□ 0.29
SSBP1-202ENST00000461433 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
SSBP1-202ENST00000461433 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
SSBP1-202ENST00000461433 NUP155O75694 1391 aa16.88■□□□□ 0.29
SSBP1-202ENST00000461433 KANK1Q14678 1352 aa16.88■□□□□ 0.29
SSBP1-202ENST00000461433 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
SSBP1-202ENST00000461433 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-202ENST00000461433 TET3O43151 1660 aa16.84■□□□□ 0.29
SSBP1-202ENST00000461433 HRCP23327 699 aa16.84■□□□□ 0.29
SSBP1-202ENST00000461433 PZPP20742 1482 aa16.83■□□□□ 0.28
SSBP1-202ENST00000461433 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
SSBP1-202ENST00000461433 EFCAB6Q5THR3 1501 aa16.83■□□□□ 0.28
SSBP1-202ENST00000461433 TRIM52Q96A61 297 aa16.82■□□□□ 0.28
SSBP1-202ENST00000461433 NPATQ14207 1427 aa16.82■□□□□ 0.28
SSBP1-202ENST00000461433 CFAP65Q6ZU64 1925 aaKnown RBP16.81■□□□□ 0.28
SSBP1-202ENST00000461433 E9PCH4 1651 aa16.81■□□□□ 0.28
SSBP1-202ENST00000461433 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
SSBP1-202ENST00000461433 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
SSBP1-202ENST00000461433 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
SSBP1-202ENST00000461433 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
SSBP1-202ENST00000461433 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
SSBP1-202ENST00000461433 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
SSBP1-202ENST00000461433 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.27
SSBP1-202ENST00000461433 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.27
SSBP1-202ENST00000461433 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
SSBP1-202ENST00000461433 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
SSBP1-202ENST00000461433 SETD1BQ9UPS6 1966 aaKnown RBP16.76■□□□□ 0.27
SSBP1-202ENST00000461433 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SSBP1-202ENST00000461433 NOS1P29475 1434 aa16.74■□□□□ 0.27
SSBP1-202ENST00000461433 PKD2Q13563 968 aa16.74■□□□□ 0.27
SSBP1-202ENST00000461433 SYNMO15061 1565 aa16.72■□□□□ 0.27
SSBP1-202ENST00000461433 TNRQ92752 1358 aa16.71■□□□□ 0.27
SSBP1-202ENST00000461433 PTPRTO14522 1441 aa16.71■□□□□ 0.27
SSBP1-202ENST00000461433 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
SSBP1-202ENST00000461433 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
SSBP1-202ENST00000461433 FOXD1Q16676 465 aa16.7■□□□□ 0.26
SSBP1-202ENST00000461433 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
SSBP1-202ENST00000461433 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
SSBP1-202ENST00000461433 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-202ENST00000461433 UGGT1Q9NYU2 1555 aa16.66■□□□□ 0.26
SSBP1-202ENST00000461433 LMTK3Q96Q04 1460 aa16.66■□□□□ 0.26
SSBP1-202ENST00000461433 NLRP1Q9C000 1473 aa16.66■□□□□ 0.26
SSBP1-202ENST00000461433 IDI1Q13907 227 aa16.65■□□□□ 0.26
SSBP1-202ENST00000461433 TRPM2O94759 1503 aa16.65■□□□□ 0.26
SSBP1-202ENST00000461433 UHRF1BP1Q6BDS2 1440 aa16.65■□□□□ 0.26
SSBP1-202ENST00000461433 CEP170BQ9Y4F5 1589 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-202ENST00000461433 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
SSBP1-202ENST00000461433 SLC52A1Q9NWF4 448 aa16.63■□□□□ 0.25
SSBP1-202ENST00000461433 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
SSBP1-202ENST00000461433 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
SSBP1-202ENST00000461433 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
SSBP1-202ENST00000461433 ANKRD30BQ9BXX2 1392 aa16.62■□□□□ 0.25
SSBP1-202ENST00000461433 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
SSBP1-202ENST00000461433 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
SSBP1-202ENST00000461433 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
SSBP1-202ENST00000461433 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
SSBP1-202ENST00000461433 HSPA2P54652 639 aa16.57■□□□□ 0.24
SSBP1-202ENST00000461433 KIF1BO60333 1816 aa16.56■□□□□ 0.24
SSBP1-202ENST00000461433 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
SSBP1-202ENST00000461433 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
SSBP1-202ENST00000461433 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
SSBP1-202ENST00000461433 STRCQ7RTU9 1775 aa16.52■□□□□ 0.24
SSBP1-202ENST00000461433 ARHGAP23Q9P227 1491 aa16.52■□□□□ 0.24
SSBP1-202ENST00000461433 SLIT1O75093 1534 aa16.52■□□□□ 0.24
SSBP1-202ENST00000461433 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
SSBP1-202ENST00000461433 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
SSBP1-202ENST00000461433 TMEM2Q9UHN6 1383 aa16.51■□□□□ 0.23
SSBP1-202ENST00000461433 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
SSBP1-202ENST00000461433 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
SSBP1-202ENST00000461433 LTKP29376 864 aa16.48■□□□□ 0.23
SSBP1-202ENST00000461433 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
SSBP1-202ENST00000461433 POLR1AO95602 1720 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-202ENST00000461433 NCKAP5LQ9HCH0 1330 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms