RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
C9orf78-202ENST00000461349 TNRQ92752 1358 aa20.86■□□□□ 0.93
C9orf78-202ENST00000461349 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
C9orf78-202ENST00000461349 DEPDC5O75140 1603 aa20.84■□□□□ 0.93
C9orf78-202ENST00000461349 IQGAP1P46940 1657 aa20.83■□□□□ 0.93
C9orf78-202ENST00000461349 ALKQ9UM73 1620 aa20.83■□□□□ 0.93
C9orf78-202ENST00000461349 KDM5DQ9BY66 1539 aa20.83■□□□□ 0.92
C9orf78-202ENST00000461349 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.92
C9orf78-202ENST00000461349 PZPP20742 1482 aa20.82■□□□□ 0.92
C9orf78-202ENST00000461349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.92
C9orf78-202ENST00000461349 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
C9orf78-202ENST00000461349 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
C9orf78-202ENST00000461349 SYNMO15061 1565 aa20.8■□□□□ 0.92
C9orf78-202ENST00000461349 UGGT1Q9NYU2 1555 aa20.8■□□□□ 0.92
C9orf78-202ENST00000461349 NPHP4O75161 1426 aaPredicted RBP20.8■□□□□ 0.92
C9orf78-202ENST00000461349 FBXO31Q5XUX0 539 aaPredicted RBP20.8■□□□□ 0.92
C9orf78-202ENST00000461349 MED14O60244 1454 aa20.8■□□□□ 0.92
C9orf78-202ENST00000461349 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
C9orf78-202ENST00000461349 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
C9orf78-202ENST00000461349 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
C9orf78-202ENST00000461349 STRCP1A6NGW2 1772 aa20.78■□□□□ 0.92
C9orf78-202ENST00000461349 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
C9orf78-202ENST00000461349 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
C9orf78-202ENST00000461349 KIF3BO15066 747 aa20.75■□□□□ 0.91
C9orf78-202ENST00000461349 TIAM1Q13009 1591 aa20.75■□□□□ 0.91
C9orf78-202ENST00000461349 WASHC2CQ9Y4E1 1318 aa20.75■□□□□ 0.91
C9orf78-202ENST00000461349 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
C9orf78-202ENST00000461349 LRRC7Q96NW7 1537 aa20.73■□□□□ 0.91
C9orf78-202ENST00000461349 MBD5Q9P267 1494 aa20.73■□□□□ 0.91
C9orf78-202ENST00000461349 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
C9orf78-202ENST00000461349 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
C9orf78-202ENST00000461349 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
C9orf78-202ENST00000461349 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
C9orf78-202ENST00000461349 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.9
C9orf78-202ENST00000461349 RGS17Q9UGC6 210 aaPredicted RBP20.64■□□□□ 0.89
C9orf78-202ENST00000461349 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
C9orf78-202ENST00000461349 UBR1Q8IWV7 1749 aa20.62■□□□□ 0.89
C9orf78-202ENST00000461349 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
C9orf78-202ENST00000461349 CAMSAP2Q08AD1 1489 aa20.61■□□□□ 0.89
C9orf78-202ENST00000461349 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
C9orf78-202ENST00000461349 ABCC3O15438 1527 aa20.58■□□□□ 0.88
C9orf78-202ENST00000461349 ERVK-7P63135 1459 aa20.56■□□□□ 0.88
C9orf78-202ENST00000461349 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
C9orf78-202ENST00000461349 CEP152O94986 1710 aa20.56■□□□□ 0.88
C9orf78-202ENST00000461349 ARHGEF5Q12774 1597 aa20.56■□□□□ 0.88
C9orf78-202ENST00000461349 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
C9orf78-202ENST00000461349 EIF2AK4Q9P2K8 1649 aaKnown RBP20.56■□□□□ 0.88
C9orf78-202ENST00000461349 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
C9orf78-202ENST00000461349 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
C9orf78-202ENST00000461349 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
C9orf78-202ENST00000461349 POTEAQ6S8J7 498 aa20.52■□□□□ 0.88
C9orf78-202ENST00000461349 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.87
C9orf78-202ENST00000461349 ROBO1Q9Y6N7 1651 aa20.51■□□□□ 0.87
C9orf78-202ENST00000461349 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
C9orf78-202ENST00000461349 SLIT1O75093 1534 aa20.5■□□□□ 0.87
C9orf78-202ENST00000461349 TXNDC2Q86VQ3 553 aa20.49■□□□□ 0.87
C9orf78-202ENST00000461349 ARHGAP23Q9P227 1491 aa20.49■□□□□ 0.87
C9orf78-202ENST00000461349 EID1Q9Y6B2 187 aa20.48■□□□□ 0.87
C9orf78-202ENST00000461349 MAST1Q9Y2H9 1570 aa20.47■□□□□ 0.87
C9orf78-202ENST00000461349 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
C9orf78-202ENST00000461349 LTKP29376 864 aa20.45■□□□□ 0.86
C9orf78-202ENST00000461349 LRRC9Q6ZRR7 1453 aa20.43■□□□□ 0.86
C9orf78-202ENST00000461349 PIK3C2BO00750 1634 aa20.43■□□□□ 0.86
C9orf78-202ENST00000461349 PHLPP1O60346 1717 aa20.43■□□□□ 0.86
C9orf78-202ENST00000461349 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
C9orf78-202ENST00000461349 KDM5AP29375 1690 aaKnown RBP20.41■□□□□ 0.86
C9orf78-202ENST00000461349 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
C9orf78-202ENST00000461349 STAG3Q9UJ98 1225 aa20.38■□□□□ 0.85
C9orf78-202ENST00000461349 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
C9orf78-202ENST00000461349 ARHGAP31Q2M1Z3 1444 aa20.37■□□□□ 0.85
C9orf78-202ENST00000461349 TMEM2Q9UHN6 1383 aa20.37■□□□□ 0.85
C9orf78-202ENST00000461349 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
C9orf78-202ENST00000461349 KCNA6P17658 529 aa20.36■□□□□ 0.85
C9orf78-202ENST00000461349 PROSER2Q86WR7 435 aaPredicted RBP20.36■□□□□ 0.85
C9orf78-202ENST00000461349 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
C9orf78-202ENST00000461349 JCADQ9P266 1359 aa20.34■□□□□ 0.85
C9orf78-202ENST00000461349 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
C9orf78-202ENST00000461349 MSH6P52701 1360 aa20.34■□□□□ 0.85
C9orf78-202ENST00000461349 NWD1Q149M9 1564 aa20.33■□□□□ 0.84
C9orf78-202ENST00000461349 TET3O43151 1660 aa20.31■□□□□ 0.84
C9orf78-202ENST00000461349 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
C9orf78-202ENST00000461349 SLC26A8Q96RN1 970 aa20.3■□□□□ 0.84
C9orf78-202ENST00000461349 COL16A1Q07092 1604 aaPredicted RBP20.28■□□□□ 0.84
C9orf78-202ENST00000461349 SLAIN2Q9P270 581 aa20.28■□□□□ 0.84
C9orf78-202ENST00000461349 CROCC2H7BZ55 1655 aa20.28■□□□□ 0.84
C9orf78-202ENST00000461349 ERBINQ96RT1 1412 aa20.27■□□□□ 0.84
C9orf78-202ENST00000461349 KANK1Q14678 1352 aa20.27■□□□□ 0.84
C9orf78-202ENST00000461349 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
C9orf78-202ENST00000461349 UPF1Q92900 1129 aaKnown RBP eCLIP20.27■□□□□ 0.84
C9orf78-202ENST00000461349 CHD2O14647 1828 aaKnown RBP20.26■□□□□ 0.83
C9orf78-202ENST00000461349 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
C9orf78-202ENST00000461349 BCANQ96GW7 911 aa20.26■□□□□ 0.83
C9orf78-202ENST00000461349 MYOM3Q5VTT5 1437 aa20.26■□□□□ 0.83
C9orf78-202ENST00000461349 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
C9orf78-202ENST00000461349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.832e-7■■□□□ 14.5
C9orf78-202ENST00000461349 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
C9orf78-202ENST00000461349 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
C9orf78-202ENST00000461349 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
C9orf78-202ENST00000461349 SHPRHQ149N8 1683 aa20.23■□□□□ 0.83
C9orf78-202ENST00000461349 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms