RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.29
APTX-209ENST00000460940 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.28
APTX-209ENST00000460940 KIF3BO15066 747 aa16.82■□□□□ 0.28
APTX-209ENST00000460940 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
APTX-209ENST00000460940 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
APTX-209ENST00000460940 ITGAEP38570 1179 aa16.79■□□□□ 0.28
APTX-209ENST00000460940 GGT6Q6P531 493 aa16.79■□□□□ 0.28
APTX-209ENST00000460940 KDM5DQ9BY66 1539 aa16.78■□□□□ 0.28
APTX-209ENST00000460940 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
APTX-209ENST00000460940 PRDM15P57071 1507 aaPredicted RBP16.77■□□□□ 0.28
APTX-209ENST00000460940 DEPDC5O75140 1603 aa16.77■□□□□ 0.28
APTX-209ENST00000460940 MROH1Q8NDA8 1641 aa16.76■□□□□ 0.27
APTX-209ENST00000460940 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
APTX-209ENST00000460940 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
APTX-209ENST00000460940 ABCC3O15438 1527 aa16.73■□□□□ 0.27
APTX-209ENST00000460940 C3P01024 1663 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 KANK1Q14678 1352 aa16.72■□□□□ 0.27
APTX-209ENST00000460940 UNC13BO14795 1591 aa16.7■□□□□ 0.26
APTX-209ENST00000460940 VWDEQ8N2E2 1590 aa16.7■□□□□ 0.26
APTX-209ENST00000460940 NAIPQ13075 1403 aa16.7■□□□□ 0.26
APTX-209ENST00000460940 NPATQ14207 1427 aa16.7■□□□□ 0.26
APTX-209ENST00000460940 LMTK2Q8IWU2 1503 aa16.69■□□□□ 0.26
APTX-209ENST00000460940 PZPP20742 1482 aa16.68■□□□□ 0.26
APTX-209ENST00000460940 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
APTX-209ENST00000460940 CAMSAP1Q5T5Y3 1602 aa16.66■□□□□ 0.26
APTX-209ENST00000460940 CEP152O94986 1710 aa16.66■□□□□ 0.26
APTX-209ENST00000460940 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
APTX-209ENST00000460940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
APTX-209ENST00000460940 ARHGAP31Q2M1Z3 1444 aa16.65■□□□□ 0.26
APTX-209ENST00000460940 PREX1Q8TCU6 1659 aa16.64■□□□□ 0.25
APTX-209ENST00000460940 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
APTX-209ENST00000460940 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
APTX-209ENST00000460940 SETD1BQ9UPS6 1966 aaKnown RBP16.62■□□□□ 0.25
APTX-209ENST00000460940 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
APTX-209ENST00000460940 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
APTX-209ENST00000460940 MYT1Q01538 1121 aa16.61■□□□□ 0.25
APTX-209ENST00000460940 TET3O43151 1660 aa16.61■□□□□ 0.25
APTX-209ENST00000460940 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
APTX-209ENST00000460940 NUP155O75694 1391 aa16.6■□□□□ 0.25
APTX-209ENST00000460940 ERVK-7P63135 1459 aa16.59■□□□□ 0.25
APTX-209ENST00000460940 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
APTX-209ENST00000460940 TNRQ92752 1358 aa16.59■□□□□ 0.25
APTX-209ENST00000460940 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.25
APTX-209ENST00000460940 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
APTX-209ENST00000460940 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
APTX-209ENST00000460940 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
APTX-209ENST00000460940 NLRP1Q9C000 1473 aa16.56■□□□□ 0.24
APTX-209ENST00000460940 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
APTX-209ENST00000460940 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
APTX-209ENST00000460940 A2ML1A8K2U0 1454 aa16.53■□□□□ 0.24
APTX-209ENST00000460940 NOS1P29475 1434 aa16.52■□□□□ 0.24
APTX-209ENST00000460940 E9PCH4 1651 aa16.51■□□□□ 0.23
APTX-209ENST00000460940 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
APTX-209ENST00000460940 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
APTX-209ENST00000460940 SYNMO15061 1565 aa16.49■□□□□ 0.23
APTX-209ENST00000460940 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.23
APTX-209ENST00000460940 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
APTX-209ENST00000460940 CFAP65Q6ZU64 1925 aaKnown RBP16.46■□□□□ 0.23
APTX-209ENST00000460940 HSPA2P54652 639 aa16.46■□□□□ 0.22
APTX-209ENST00000460940 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.22
APTX-209ENST00000460940 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
APTX-209ENST00000460940 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
APTX-209ENST00000460940 PTPRTO14522 1441 aa16.45■□□□□ 0.22
APTX-209ENST00000460940 KDM5AP29375 1690 aaKnown RBP16.44■□□□□ 0.22
APTX-209ENST00000460940 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
APTX-209ENST00000460940 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
APTX-209ENST00000460940 PKD2Q13563 968 aa16.42■□□□□ 0.22
APTX-209ENST00000460940 THEMISQ8N1K5 641 aaPredicted RBP16.42■□□□□ 0.22
APTX-209ENST00000460940 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
APTX-209ENST00000460940 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
APTX-209ENST00000460940 TRPM2O94759 1503 aa16.42■□□□□ 0.22
APTX-209ENST00000460940 IDI1Q13907 227 aa16.4■□□□□ 0.22
APTX-209ENST00000460940 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
APTX-209ENST00000460940 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
APTX-209ENST00000460940 SLIT1O75093 1534 aa16.37■□□□□ 0.21
APTX-209ENST00000460940 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
APTX-209ENST00000460940 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
APTX-209ENST00000460940 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
APTX-209ENST00000460940 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
APTX-209ENST00000460940 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
APTX-209ENST00000460940 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
APTX-209ENST00000460940 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
APTX-209ENST00000460940 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
APTX-209ENST00000460940 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.2
APTX-209ENST00000460940 MED14O60244 1454 aa16.32■□□□□ 0.2
APTX-209ENST00000460940 NEURL4Q96JN8 1562 aa16.32■□□□□ 0.2
APTX-209ENST00000460940 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
APTX-209ENST00000460940 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
APTX-209ENST00000460940 FOXD1Q16676 465 aa16.31■□□□□ 0.2
APTX-209ENST00000460940 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
APTX-209ENST00000460940 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
APTX-209ENST00000460940 NPHP4O75161 1426 aaPredicted RBP16.29■□□□□ 0.2
APTX-209ENST00000460940 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
APTX-209ENST00000460940 KIF1BO60333 1816 aa16.28■□□□□ 0.2
APTX-209ENST00000460940 MYO5BQ9ULV0 1848 aa16.28■□□□□ 0.2
APTX-209ENST00000460940 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms