RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
SSR4-206ENST00000460616 HNRNPMP52272 730 aaKnown RBP eCLIP20.79■□□□□ 0.92
SSR4-206ENST00000460616 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
SSR4-206ENST00000460616 ABCC1P33527 1531 aa20.78■□□□□ 0.92
SSR4-206ENST00000460616 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
SSR4-206ENST00000460616 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
SSR4-206ENST00000460616 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.92
SSR4-206ENST00000460616 ABCC5O15440 1437 aa20.76■□□□□ 0.91
SSR4-206ENST00000460616 DAPK1P53355 1430 aa20.76■□□□□ 0.91
SSR4-206ENST00000460616 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
SSR4-206ENST00000460616 MBD5Q9P267 1494 aa20.76■□□□□ 0.91
SSR4-206ENST00000460616 NBPF8Q3BBV2 869 aa20.75■□□□□ 0.91
SSR4-206ENST00000460616 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
SSR4-206ENST00000460616 NEFMP07197 916 aa20.75■□□□□ 0.91
SSR4-206ENST00000460616 FOXD1Q16676 465 aa20.73■□□□□ 0.91
SSR4-206ENST00000460616 ADGRL1O94910 1474 aa20.73■□□□□ 0.91
SSR4-206ENST00000460616 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
SSR4-206ENST00000460616 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
SSR4-206ENST00000460616 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
SSR4-206ENST00000460616 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
SSR4-206ENST00000460616 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
SSR4-206ENST00000460616 LAS1LQ9Y4W2 734 aaKnown RBP20.71■□□□□ 0.91
SSR4-206ENST00000460616 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
SSR4-206ENST00000460616 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
SSR4-206ENST00000460616 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
SSR4-206ENST00000460616 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
SSR4-206ENST00000460616 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
SSR4-206ENST00000460616 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
SSR4-206ENST00000460616 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
SSR4-206ENST00000460616 PDE4AP27815 886 aa20.67■□□□□ 0.9
SSR4-206ENST00000460616 NEO1Q92859 1461 aa20.67■□□□□ 0.9
SSR4-206ENST00000460616 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
SSR4-206ENST00000460616 DHX29Q7Z478 1369 aaKnown RBP20.66■□□□□ 0.9
SSR4-206ENST00000460616 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
SSR4-206ENST00000460616 AFAP1Q8N556 730 aa20.66■□□□□ 0.9
SSR4-206ENST00000460616 WASHC2CQ9Y4E1 1318 aa20.65■□□□□ 0.9
SSR4-206ENST00000460616 PNISRQ8TF01 805 aaKnown RBP20.65■□□□□ 0.9
SSR4-206ENST00000460616 C9orf84Q5VXU9 1444 aa20.64■□□□□ 0.9
SSR4-206ENST00000460616 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
SSR4-206ENST00000460616 KDM6BO15054 1643 aa20.63■□□□□ 0.89
SSR4-206ENST00000460616 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
SSR4-206ENST00000460616 RPRD2Q5VT52 1461 aaKnown RBP20.63■□□□□ 0.89
SSR4-206ENST00000460616 BACH2Q9BYV9 841 aa20.63■□□□□ 0.89
SSR4-206ENST00000460616 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
SSR4-206ENST00000460616 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
SSR4-206ENST00000460616 TMC1Q8TDI8 760 aa20.62■□□□□ 0.89
SSR4-206ENST00000460616 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
SSR4-206ENST00000460616 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
SSR4-206ENST00000460616 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
SSR4-206ENST00000460616 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
SSR4-206ENST00000460616 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
SSR4-206ENST00000460616 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
SSR4-206ENST00000460616 POGZQ7Z3K3 1410 aa20.6■□□□□ 0.89
SSR4-206ENST00000460616 FRMPD1Q5SYB0 1578 aa20.6■□□□□ 0.89
SSR4-206ENST00000460616 MS4A1P11836 297 aa20.6■□□□□ 0.89
SSR4-206ENST00000460616 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
SSR4-206ENST00000460616 TSPY4P0CV99 314 aa20.59■□□□□ 0.89
SSR4-206ENST00000460616 TSPY10P0CW01 314 aa20.59■□□□□ 0.89
SSR4-206ENST00000460616 POLR1AO95602 1720 aaPredicted RBP20.58■□□□□ 0.89
SSR4-206ENST00000460616 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.89
SSR4-206ENST00000460616 ADGRL2O95490 1459 aa20.58■□□□□ 0.89
SSR4-206ENST00000460616 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.88
SSR4-206ENST00000460616 INO80Q9ULG1 1556 aaPredicted RBP20.57■□□□□ 0.88
SSR4-206ENST00000460616 ZNF518AQ6AHZ1 1483 aa20.57■□□□□ 0.88
SSR4-206ENST00000460616 KDM5CP41229 1560 aa20.56■□□□□ 0.88
SSR4-206ENST00000460616 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
SSR4-206ENST00000460616 KIDINS220Q9ULH0 1771 aa20.56■□□□□ 0.88
SSR4-206ENST00000460616 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
SSR4-206ENST00000460616 ATP7AQ04656 1500 aa20.55■□□□□ 0.88
SSR4-206ENST00000460616 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
SSR4-206ENST00000460616 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
SSR4-206ENST00000460616 ANKRD30AQ9BXX3 1397 aa20.53■□□□□ 0.88
SSR4-206ENST00000460616 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
SSR4-206ENST00000460616 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
SSR4-206ENST00000460616 GSE1Q14687 1217 aa20.52■□□□□ 0.88
SSR4-206ENST00000460616 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
SSR4-206ENST00000460616 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.88
SSR4-206ENST00000460616 KIF15Q9NS87 1388 aa20.52■□□□□ 0.87
SSR4-206ENST00000460616 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
SSR4-206ENST00000460616 BRPF3Q9ULD4 1205 aa20.51■□□□□ 0.87
SSR4-206ENST00000460616 USP47Q96K76 1375 aa20.5■□□□□ 0.87
SSR4-206ENST00000460616 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
SSR4-206ENST00000460616 LRPPRCP42704 1394 aaKnown RBP20.49■□□□□ 0.87
SSR4-206ENST00000460616 RTEL1-TNFRSF6BF6WH68 1400 aa20.47■□□□□ 0.87
SSR4-206ENST00000460616 UBE2Q2Q8WVN8 375 aa20.47■□□□□ 0.87
SSR4-206ENST00000460616 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
SSR4-206ENST00000460616 MLH3Q9UHC1 1453 aa20.46■□□□□ 0.87
SSR4-206ENST00000460616 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
SSR4-206ENST00000460616 ANKRD50Q9ULJ7 1429 aa20.45■□□□□ 0.86
SSR4-206ENST00000460616 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.86
SSR4-206ENST00000460616 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
SSR4-206ENST00000460616 NFKBIBQ15653 356 aa20.44■□□□□ 0.86
SSR4-206ENST00000460616 BCORL1Q5H9F3 1711 aa20.44■□□□□ 0.86
SSR4-206ENST00000460616 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
SSR4-206ENST00000460616 DIP2CQ9Y2E4 1556 aa20.43■□□□□ 0.86
SSR4-206ENST00000460616 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
SSR4-206ENST00000460616 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
SSR4-206ENST00000460616 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
SSR4-206ENST00000460616 RALBP1Q15311 655 aa20.41■□□□□ 0.86
SSR4-206ENST00000460616 FRAT1Q92837 279 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms