RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
YIPF3-205ENST00000460547 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
YIPF3-205ENST00000460547 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
YIPF3-205ENST00000460547 CCDC141Q6ZP82 1450 aa24.27■■□□□ 1.48
YIPF3-205ENST00000460547 REREQ9P2R6 1566 aa24.27■■□□□ 1.48
YIPF3-205ENST00000460547 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
YIPF3-205ENST00000460547 MPHOSPH9Q99550 1183 aa24.27■■□□□ 1.48
YIPF3-205ENST00000460547 ESF1Q9H501 851 aaKnown RBP24.27■■□□□ 1.48
YIPF3-205ENST00000460547 RTEL1-TNFRSF6BF6WH68 1400 aa24.26■■□□□ 1.47
YIPF3-205ENST00000460547 AGLP35573 1532 aa24.23■■□□□ 1.47
YIPF3-205ENST00000460547 INO80Q9ULG1 1556 aaPredicted RBP24.22■■□□□ 1.47
YIPF3-205ENST00000460547 A2MP01023 1474 aa24.22■■□□□ 1.47
YIPF3-205ENST00000460547 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
YIPF3-205ENST00000460547 PZPP20742 1482 aa24.21■■□□□ 1.47
YIPF3-205ENST00000460547 MAST1Q9Y2H9 1570 aa24.19■■□□□ 1.46
YIPF3-205ENST00000460547 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
YIPF3-205ENST00000460547 ANKRD30BQ9BXX2 1392 aa24.18■■□□□ 1.46
YIPF3-205ENST00000460547 GGT6Q6P531 493 aa24.17■■□□□ 1.46
YIPF3-205ENST00000460547 KDM5DQ9BY66 1539 aa24.16■■□□□ 1.46
YIPF3-205ENST00000460547 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
YIPF3-205ENST00000460547 MIER1Q8N108 512 aa24.16■■□□□ 1.46
YIPF3-205ENST00000460547 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
YIPF3-205ENST00000460547 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
YIPF3-205ENST00000460547 CEBPAP49715 358 aaPredicted RBP24.14■■□□□ 1.45
YIPF3-205ENST00000460547 KIF3BO15066 747 aa24.11■■□□□ 1.45
YIPF3-205ENST00000460547 KIF15Q9NS87 1388 aa24.1■■□□□ 1.45
YIPF3-205ENST00000460547 PLXNC1O60486 1568 aa24.1■■□□□ 1.45
YIPF3-205ENST00000460547 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
YIPF3-205ENST00000460547 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
YIPF3-205ENST00000460547 CNTLNQ9NXG0 1405 aa24.09■■□□□ 1.45
YIPF3-205ENST00000460547 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
YIPF3-205ENST00000460547 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
YIPF3-205ENST00000460547 FOXD1Q16676 465 aa24.02■■□□□ 1.44
YIPF3-205ENST00000460547 UNC13BO14795 1591 aa23.98■■□□□ 1.43
YIPF3-205ENST00000460547 WASHC2CQ9Y4E1 1318 aa23.98■■□□□ 1.43
YIPF3-205ENST00000460547 LMTK3Q96Q04 1460 aa23.97■■□□□ 1.43
YIPF3-205ENST00000460547 NUP155O75694 1391 aa23.97■■□□□ 1.43
YIPF3-205ENST00000460547 L3MBTL2Q969R5 705 aa23.96■■□□□ 1.43
YIPF3-205ENST00000460547 DUOX2Q9NRD8 1548 aa23.95■■□□□ 1.42
YIPF3-205ENST00000460547 HSPA2P54652 639 aa23.95■■□□□ 1.42
YIPF3-205ENST00000460547 C3P01024 1663 aa23.94■■□□□ 1.42
YIPF3-205ENST00000460547 PKD2Q13563 968 aa23.93■■□□□ 1.42
YIPF3-205ENST00000460547 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
YIPF3-205ENST00000460547 UHRF1BP1Q6BDS2 1440 aa23.92■■□□□ 1.42
YIPF3-205ENST00000460547 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
YIPF3-205ENST00000460547 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
YIPF3-205ENST00000460547 MROH2AA6NES4 1674 aa23.91■■□□□ 1.42
YIPF3-205ENST00000460547 NPATQ14207 1427 aa23.89■■□□□ 1.42
YIPF3-205ENST00000460547 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
YIPF3-205ENST00000460547 IQGAP3Q86VI3 1631 aa23.87■■□□□ 1.41
YIPF3-205ENST00000460547 PREX1Q8TCU6 1659 aa23.87■■□□□ 1.41
YIPF3-205ENST00000460547 EIF2AK4Q9P2K8 1649 aaKnown RBP23.86■■□□□ 1.41
YIPF3-205ENST00000460547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.411e-6■■□□□ 12.8
YIPF3-205ENST00000460547 FBXO31Q5XUX0 539 aaPredicted RBP23.83■■□□□ 1.4
YIPF3-205ENST00000460547 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
YIPF3-205ENST00000460547 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
YIPF3-205ENST00000460547 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
YIPF3-205ENST00000460547 KANK1Q14678 1352 aa23.8■■□□□ 1.4
YIPF3-205ENST00000460547 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
YIPF3-205ENST00000460547 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
YIPF3-205ENST00000460547 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
YIPF3-205ENST00000460547 ABCC3O15438 1527 aa23.76■■□□□ 1.39
YIPF3-205ENST00000460547 SCAF1Q9H7N4 1312 aaKnown RBP23.76■■□□□ 1.39
YIPF3-205ENST00000460547 YTHDC1Q96MU7 727 aaKnown RBP23.76■■□□□ 1.39
YIPF3-205ENST00000460547 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
YIPF3-205ENST00000460547 TNRQ92752 1358 aa23.75■■□□□ 1.39
YIPF3-205ENST00000460547 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
YIPF3-205ENST00000460547 MROH1Q8NDA8 1641 aa23.74■■□□□ 1.39
YIPF3-205ENST00000460547 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
YIPF3-205ENST00000460547 DEPDC5O75140 1603 aa23.72■■□□□ 1.39
YIPF3-205ENST00000460547 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
YIPF3-205ENST00000460547 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
YIPF3-205ENST00000460547 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
YIPF3-205ENST00000460547 POLR1AO95602 1720 aaPredicted RBP23.69■■□□□ 1.38
YIPF3-205ENST00000460547 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
YIPF3-205ENST00000460547 WASHC2AQ641Q2 1341 aa23.68■■□□□ 1.38
YIPF3-205ENST00000460547 MYO3AQ8NEV4 1616 aa23.67■■□□□ 1.38
YIPF3-205ENST00000460547 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
YIPF3-205ENST00000460547 A2ML1A8K2U0 1454 aa23.66■■□□□ 1.38
YIPF3-205ENST00000460547 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
YIPF3-205ENST00000460547 CEP152O94986 1710 aa23.66■■□□□ 1.38
YIPF3-205ENST00000460547 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
YIPF3-205ENST00000460547 CAMSAP1Q5T5Y3 1602 aa23.64■■□□□ 1.38
YIPF3-205ENST00000460547 THEMISQ8N1K5 641 aaPredicted RBP23.64■■□□□ 1.38
YIPF3-205ENST00000460547 CCDC7Q96M83 1385 aa23.64■■□□□ 1.37
YIPF3-205ENST00000460547 ANP32CO43423 234 aa23.64■■□□□ 1.37
YIPF3-205ENST00000460547 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
YIPF3-205ENST00000460547 VWDEQ8N2E2 1590 aa23.63■■□□□ 1.37
YIPF3-205ENST00000460547 ERVK-7P63135 1459 aa23.63■■□□□ 1.37
YIPF3-205ENST00000460547 NCKAP5LQ9HCH0 1330 aa23.62■■□□□ 1.37
YIPF3-205ENST00000460547 LMTK2Q8IWU2 1503 aa23.62■■□□□ 1.37
YIPF3-205ENST00000460547 SPATA31D1Q6ZQQ2 1576 aa23.61■■□□□ 1.37
YIPF3-205ENST00000460547 ZNF142P52746 1687 aaPredicted RBP23.61■■□□□ 1.37
YIPF3-205ENST00000460547 USP47Q96K76 1375 aa23.59■■□□□ 1.37
YIPF3-205ENST00000460547 TET3O43151 1660 aa23.59■■□□□ 1.37
YIPF3-205ENST00000460547 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
YIPF3-205ENST00000460547 PTPRTO14522 1441 aa23.57■■□□□ 1.36
YIPF3-205ENST00000460547 E9PCH4 1651 aa23.57■■□□□ 1.36
YIPF3-205ENST00000460547 TRPM2O94759 1503 aa23.57■■□□□ 1.36
YIPF3-205ENST00000460547 UGGT1Q9NYU2 1555 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms