RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 EPAS1Q99814 870 aa9.93□□□□□ -0.82
TTC3-211ENST00000460328 ARIH1Q9Y4X5 557 aaPredicted RBP9.93□□□□□ -0.82
TTC3-211ENST00000460328 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
TTC3-211ENST00000460328 SLC4A5Q9BY07 1137 aa9.91□□□□□ -0.82
TTC3-211ENST00000460328 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
TTC3-211ENST00000460328 NBR1Q14596 966 aa9.9□□□□□ -0.82
TTC3-211ENST00000460328 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
TTC3-211ENST00000460328 STAC3Q96MF2 364 aa9.9□□□□□ -0.82
TTC3-211ENST00000460328 COL9A1P20849 921 aa9.89□□□□□ -0.83
TTC3-211ENST00000460328 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
TTC3-211ENST00000460328 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
TTC3-211ENST00000460328 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
TTC3-211ENST00000460328 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
TTC3-211ENST00000460328 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
TTC3-211ENST00000460328 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
TTC3-211ENST00000460328 MAP3K7O43318 606 aa9.85□□□□□ -0.83
TTC3-211ENST00000460328 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
TTC3-211ENST00000460328 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
TTC3-211ENST00000460328 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
TTC3-211ENST00000460328 HAP1P54257 671 aaPredicted RBP9.82□□□□□ -0.84
TTC3-211ENST00000460328 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
TTC3-211ENST00000460328 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
TTC3-211ENST00000460328 MRPL50Q8N5N7 158 aaKnown RBP9.81□□□□□ -0.84
TTC3-211ENST00000460328 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
TTC3-211ENST00000460328 GOLGA8CPA6NN73 597 aa9.79□□□□□ -0.84
TTC3-211ENST00000460328 OSBPP22059 807 aa9.79□□□□□ -0.84
TTC3-211ENST00000460328 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
TTC3-211ENST00000460328 KIAA1468Q9P260 1216 aa9.78□□□□□ -0.84
TTC3-211ENST00000460328 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
TTC3-211ENST00000460328 MLLT3P42568 568 aaPredicted RBP9.76□□□□□ -0.85
TTC3-211ENST00000460328 WNT2BQ93097 391 aa9.76□□□□□ -0.85
TTC3-211ENST00000460328 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
TTC3-211ENST00000460328 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
TTC3-211ENST00000460328 PTPN5P54829 565 aa9.75□□□□□ -0.85
TTC3-211ENST00000460328 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
TTC3-211ENST00000460328 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
TTC3-211ENST00000460328 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
TTC3-211ENST00000460328 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
TTC3-211ENST00000460328 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
TTC3-211ENST00000460328 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
TTC3-211ENST00000460328 CERKQ8TCT0 537 aa9.71□□□□□ -0.86
TTC3-211ENST00000460328 PRSS12P56730 875 aa9.7□□□□□ -0.86
TTC3-211ENST00000460328 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
TTC3-211ENST00000460328 SEMA3EO15041 775 aa9.69□□□□□ -0.86
TTC3-211ENST00000460328 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
TTC3-211ENST00000460328 ZFRQ96KR1 1074 aaKnown RBP9.69□□□□□ -0.86
TTC3-211ENST00000460328 FAM198AQ9UFP1 575 aa9.69□□□□□ -0.86
TTC3-211ENST00000460328 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
TTC3-211ENST00000460328 RGS20O76081 388 aa9.68□□□□□ -0.86
TTC3-211ENST00000460328 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
TTC3-211ENST00000460328 BCAMP50895 628 aa9.67□□□□□ -0.86
TTC3-211ENST00000460328 SMAPO00193 183 aa9.66□□□□□ -0.86
TTC3-211ENST00000460328 NPDC1Q9NQX5 325 aaPredicted RBP9.66□□□□□ -0.86
TTC3-211ENST00000460328 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
TTC3-211ENST00000460328 NBPF26B4DH59 902 aa9.64□□□□□ -0.87
TTC3-211ENST00000460328 C3orf80F5H4A9 247 aa9.64□□□□□ -0.87
TTC3-211ENST00000460328 PADI6Q6TGC4 694 aa9.64□□□□□ -0.87
TTC3-211ENST00000460328 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
TTC3-211ENST00000460328 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
TTC3-211ENST00000460328 TATDN2Q93075 761 aa9.63□□□□□ -0.87
TTC3-211ENST00000460328 A0A0G2JS52 829 aa9.61□□□□□ -0.87
TTC3-211ENST00000460328 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
TTC3-211ENST00000460328 LRCH3Q96II8 777 aa9.61□□□□□ -0.87
TTC3-211ENST00000460328 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
TTC3-211ENST00000460328 NUTM2FA1L443 756 aa9.6□□□□□ -0.87
TTC3-211ENST00000460328 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
TTC3-211ENST00000460328 PTGDRQ13258 359 aa9.6□□□□□ -0.87
TTC3-211ENST00000460328 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
TTC3-211ENST00000460328 TTC13Q8NBP0 860 aa9.6□□□□□ -0.87
TTC3-211ENST00000460328 WBP1LQ9NX94 342 aa9.59□□□□□ -0.87
TTC3-211ENST00000460328 SAMD7Q7Z3H4 446 aa9.58□□□□□ -0.88
TTC3-211ENST00000460328 HPS5Q9UPZ3 1129 aa9.58□□□□□ -0.88
TTC3-211ENST00000460328 TSR3Q9UJK0 312 aaKnown RBP9.56□□□□□ -0.88
TTC3-211ENST00000460328 RBM26Q5T8P6 1007 aaKnown RBP9.55□□□□□ -0.88
TTC3-211ENST00000460328 SMYD5Q6GMV2 418 aa9.55□□□□□ -0.88
TTC3-211ENST00000460328 ITGBL1O95965 494 aaPredicted RBP9.54□□□□□ -0.88
TTC3-211ENST00000460328 RNF40O75150 1001 aa9.53□□□□□ -0.88
TTC3-211ENST00000460328 FCHSD2O94868 740 aa9.53□□□□□ -0.88
TTC3-211ENST00000460328 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
TTC3-211ENST00000460328 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
TTC3-211ENST00000460328 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
TTC3-211ENST00000460328 PPP4CP60510 307 aa9.51□□□□□ -0.89
TTC3-211ENST00000460328 EYA1Q99502 592 aa9.51□□□□□ -0.89
TTC3-211ENST00000460328 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
TTC3-211ENST00000460328 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
TTC3-211ENST00000460328 ADGRG1Q9Y653 693 aa9.49□□□□□ -0.89
TTC3-211ENST00000460328 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
TTC3-211ENST00000460328 GPR37O15354 613 aa9.46□□□□□ -0.9
TTC3-211ENST00000460328 HIC1Q14526 733 aa9.46□□□□□ -0.9
TTC3-211ENST00000460328 DNAJB2P25686 324 aa9.45□□□□□ -0.9
TTC3-211ENST00000460328 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
TTC3-211ENST00000460328 FECHP22830 423 aa9.44□□□□□ -0.9
TTC3-211ENST00000460328 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
TTC3-211ENST00000460328 GNPATO15228 680 aa9.43□□□□□ -0.9
TTC3-211ENST00000460328 KCNC4Q03721 635 aa9.43□□□□□ -0.9
TTC3-211ENST00000460328 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
TTC3-211ENST00000460328 SLC4A3P48751 1232 aa9.42□□□□□ -0.9
TTC3-211ENST00000460328 APLP1P51693 650 aa9.42□□□□□ -0.9
TTC3-211ENST00000460328 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
TTC3-211ENST00000460328 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms