RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
HERC4-207ENST00000460168 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
HERC4-207ENST00000460168 PKD2Q13563 968 aa14.81□□□□□ -0.04
HERC4-207ENST00000460168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
HERC4-207ENST00000460168 ANKRD30BQ9BXX2 1392 aa14.8□□□□□ -0.04
HERC4-207ENST00000460168 UNC13BO14795 1591 aa14.8□□□□□ -0.04
HERC4-207ENST00000460168 ARXQ96QS3 562 aa14.79□□□□□ -0.04
HERC4-207ENST00000460168 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
HERC4-207ENST00000460168 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
HERC4-207ENST00000460168 KDM5CP41229 1560 aa14.78□□□□□ -0.04
HERC4-207ENST00000460168 KIDINS220Q9ULH0 1771 aa14.78□□□□□ -0.04
HERC4-207ENST00000460168 TSPOAP1O95153 1857 aa14.78□□□□□ -0.04
HERC4-207ENST00000460168 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.05
HERC4-207ENST00000460168 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
HERC4-207ENST00000460168 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
HERC4-207ENST00000460168 ANO8Q9HCE9 1232 aaPredicted RBP14.75□□□□□ -0.05
HERC4-207ENST00000460168 IQGAP3Q86VI3 1631 aa14.75□□□□□ -0.05
HERC4-207ENST00000460168 MLH3Q9UHC1 1453 aa14.75□□□□□ -0.05
HERC4-207ENST00000460168 RPRD2Q5VT52 1461 aaKnown RBP14.74□□□□□ -0.05
HERC4-207ENST00000460168 MAGI2Q86UL8 1455 aa14.74□□□□□ -0.05
HERC4-207ENST00000460168 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
HERC4-207ENST00000460168 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
HERC4-207ENST00000460168 PPP1R15AO75807 674 aaPredicted RBP14.74□□□□□ -0.05
HERC4-207ENST00000460168 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
HERC4-207ENST00000460168 RICTORQ6R327 1708 aa14.72□□□□□ -0.05
HERC4-207ENST00000460168 KIF3BO15066 747 aa14.72□□□□□ -0.05
HERC4-207ENST00000460168 EIF2AK4Q9P2K8 1649 aaKnown RBP14.72□□□□□ -0.05
HERC4-207ENST00000460168 PPRC1Q5VV67 1664 aaKnown RBP14.72□□□□□ -0.05
HERC4-207ENST00000460168 A2MP01023 1474 aa14.71□□□□□ -0.05
HERC4-207ENST00000460168 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
HERC4-207ENST00000460168 ABCA6Q8N139 1617 aa14.69□□□□□ -0.06
HERC4-207ENST00000460168 KANK1Q14678 1352 aa14.69□□□□□ -0.06
HERC4-207ENST00000460168 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
HERC4-207ENST00000460168 L3MBTL2Q969R5 705 aa14.68□□□□□ -0.06
HERC4-207ENST00000460168 PKNOX2Q96KN3 472 aa14.68□□□□□ -0.06
HERC4-207ENST00000460168 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
HERC4-207ENST00000460168 PRDM15P57071 1507 aaPredicted RBP14.67□□□□□ -0.06
HERC4-207ENST00000460168 DIP2CQ9Y2E4 1556 aa14.65□□□□□ -0.06
HERC4-207ENST00000460168 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
HERC4-207ENST00000460168 MROH1Q8NDA8 1641 aa14.64□□□□□ -0.07
HERC4-207ENST00000460168 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
HERC4-207ENST00000460168 ZMYM4Q5VZL5 1548 aa14.64□□□□□ -0.07
HERC4-207ENST00000460168 VWDEQ8N2E2 1590 aa14.63□□□□□ -0.07
HERC4-207ENST00000460168 RNF17Q9BXT8 1623 aaKnown RBP14.63□□□□□ -0.07
HERC4-207ENST00000460168 TET3O43151 1660 aa14.63□□□□□ -0.07
HERC4-207ENST00000460168 E9PCH4 1651 aa14.63□□□□□ -0.07
HERC4-207ENST00000460168 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
HERC4-207ENST00000460168 GGT6Q6P531 493 aa14.62□□□□□ -0.07
HERC4-207ENST00000460168 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
HERC4-207ENST00000460168 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
HERC4-207ENST00000460168 ATP10AO60312 1499 aa14.6□□□□□ -0.07
HERC4-207ENST00000460168 CEP152O94986 1710 aa14.58□□□□□ -0.08
HERC4-207ENST00000460168 SPHKAPQ2M3C7 1700 aa14.57□□□□□ -0.08
HERC4-207ENST00000460168 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
HERC4-207ENST00000460168 EFCAB6Q5THR3 1501 aa14.57□□□□□ -0.08
HERC4-207ENST00000460168 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
HERC4-207ENST00000460168 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
HERC4-207ENST00000460168 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
HERC4-207ENST00000460168 WASHC2CQ9Y4E1 1318 aa14.56□□□□□ -0.08
HERC4-207ENST00000460168 ZNF326Q5BKZ1 582 aaKnown RBP14.56□□□□□ -0.08
HERC4-207ENST00000460168 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
HERC4-207ENST00000460168 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
HERC4-207ENST00000460168 TRPM2O94759 1503 aa14.55□□□□□ -0.08
HERC4-207ENST00000460168 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
HERC4-207ENST00000460168 DCAF11Q8TEB1 546 aa14.54□□□□□ -0.08
HERC4-207ENST00000460168 PTPRTO14522 1441 aa14.54□□□□□ -0.08
HERC4-207ENST00000460168 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
HERC4-207ENST00000460168 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
HERC4-207ENST00000460168 ABCC3O15438 1527 aa14.53□□□□□ -0.08
HERC4-207ENST00000460168 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
HERC4-207ENST00000460168 ARHGEF40Q8TER5 1519 aa14.51□□□□□ -0.09
HERC4-207ENST00000460168 NPATQ14207 1427 aa14.5□□□□□ -0.09
HERC4-207ENST00000460168 CLTCL1P53675 1640 aa14.5□□□□□ -0.09
HERC4-207ENST00000460168 ZC3H13Q5T200 1668 aaKnown RBP14.5□□□□□ -0.09
HERC4-207ENST00000460168 CAMSAP1Q5T5Y3 1602 aa14.5□□□□□ -0.09
HERC4-207ENST00000460168 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
HERC4-207ENST00000460168 EIF4G2P78344 907 aaKnown RBP eCLIP14.5□□□□□ -0.09
HERC4-207ENST00000460168 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
HERC4-207ENST00000460168 CFAP65Q6ZU64 1925 aaKnown RBP14.48□□□□□ -0.09
HERC4-207ENST00000460168 SPATA31E1Q6ZUB1 1445 aa14.48□□□□□ -0.09
HERC4-207ENST00000460168 AGLP35573 1532 aa14.48□□□□□ -0.09
HERC4-207ENST00000460168 HSPA5P11021 654 aaKnown RBP14.47□□□□□ -0.09
HERC4-207ENST00000460168 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
HERC4-207ENST00000460168 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
HERC4-207ENST00000460168 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
HERC4-207ENST00000460168 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
HERC4-207ENST00000460168 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
HERC4-207ENST00000460168 KIF1BO60333 1816 aa14.44□□□□□ -0.1
HERC4-207ENST00000460168 MLECQ14165 292 aa14.44□□□□□ -0.1
HERC4-207ENST00000460168 ERICH6BQ5W0A0 696 aa14.44□□□□□ -0.1
HERC4-207ENST00000460168 ARHGAP31Q2M1Z3 1444 aa14.44□□□□□ -0.1
HERC4-207ENST00000460168 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
HERC4-207ENST00000460168 CARD11Q9BXL7 1154 aa14.42□□□□□ -0.1
HERC4-207ENST00000460168 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
HERC4-207ENST00000460168 NEFLP07196 543 aa14.42□□□□□ -0.1
HERC4-207ENST00000460168 NEURL4Q96JN8 1562 aa14.42□□□□□ -0.1
HERC4-207ENST00000460168 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
HERC4-207ENST00000460168 CHGAP10645 457 aaKnown RBP14.41□□□□□ -0.1
HERC4-207ENST00000460168 USP47Q96K76 1375 aa14.41□□□□□ -0.1
HERC4-207ENST00000460168 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms