RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
SHANK2-213ENST00000460048 DAPK1P53355 1430 aa25.67■■□□□ 1.7
SHANK2-213ENST00000460048 PTPRKQ15262 1439 aa25.67■■□□□ 1.7
SHANK2-213ENST00000460048 KDM5DQ9BY66 1539 aa25.67■■□□□ 1.7
SHANK2-213ENST00000460048 DUOX2Q9NRD8 1548 aa25.65■■□□□ 1.7
SHANK2-213ENST00000460048 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
SHANK2-213ENST00000460048 ZNF142P52746 1687 aaPredicted RBP25.63■■□□□ 1.69
SHANK2-213ENST00000460048 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
SHANK2-213ENST00000460048 MROH1Q8NDA8 1641 aa25.62■■□□□ 1.69
SHANK2-213ENST00000460048 ZC3H13Q5T200 1668 aaKnown RBP25.6■■□□□ 1.69
SHANK2-213ENST00000460048 KIF15Q9NS87 1388 aa25.58■■□□□ 1.69
SHANK2-213ENST00000460048 WASHC2CQ9Y4E1 1318 aa25.58■■□□□ 1.69
SHANK2-213ENST00000460048 PZPP20742 1482 aa25.57■■□□□ 1.68
SHANK2-213ENST00000460048 ERBINQ96RT1 1412 aa25.56■■□□□ 1.68
SHANK2-213ENST00000460048 CEP152O94986 1710 aa25.55■■□□□ 1.68
SHANK2-213ENST00000460048 ABCC3O15438 1527 aa25.55■■□□□ 1.68
SHANK2-213ENST00000460048 CEP170BQ9Y4F5 1589 aaPredicted RBP25.55■■□□□ 1.68
SHANK2-213ENST00000460048 RRP7BPQ9NSQ0 103 aa25.54■■□□□ 1.68
SHANK2-213ENST00000460048 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
SHANK2-213ENST00000460048 DEPDC5O75140 1603 aa25.52■■□□□ 1.68
SHANK2-213ENST00000460048 CAMSAP1Q5T5Y3 1602 aa25.52■■□□□ 1.68
SHANK2-213ENST00000460048 ANKRD30AQ9BXX3 1397 aa25.52■■□□□ 1.68
SHANK2-213ENST00000460048 NCOA1Q15788 1441 aa25.52■■□□□ 1.68
SHANK2-213ENST00000460048 PRDM15P57071 1507 aaPredicted RBP25.51■■□□□ 1.67
SHANK2-213ENST00000460048 FAM50AQ14320 339 aaKnown RBP25.5■■□□□ 1.67
SHANK2-213ENST00000460048 FBXO31Q5XUX0 539 aaPredicted RBP25.5■■□□□ 1.67
SHANK2-213ENST00000460048 CHIC2Q9UKJ5 165 aa25.5■■□□□ 1.67
SHANK2-213ENST00000460048 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
SHANK2-213ENST00000460048 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
SHANK2-213ENST00000460048 TNRQ92752 1358 aa25.47■■□□□ 1.67
SHANK2-213ENST00000460048 PTPRTO14522 1441 aa25.46■■□□□ 1.67
SHANK2-213ENST00000460048 CFAP65Q6ZU64 1925 aaKnown RBP25.46■■□□□ 1.67
SHANK2-213ENST00000460048 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
SHANK2-213ENST00000460048 SPATA31D1Q6ZQQ2 1576 aa25.44■■□□□ 1.66
SHANK2-213ENST00000460048 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
SHANK2-213ENST00000460048 NLRP1Q9C000 1473 aa25.4■■□□□ 1.66
SHANK2-213ENST00000460048 VWDEQ8N2E2 1590 aa25.4■■□□□ 1.66
SHANK2-213ENST00000460048 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
SHANK2-213ENST00000460048 ARHGAP31Q2M1Z3 1444 aa25.38■■□□□ 1.65
SHANK2-213ENST00000460048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.658e-9■■■■■ 30
SHANK2-213ENST00000460048 POLR1AO95602 1720 aaPredicted RBP25.37■■□□□ 1.65
SHANK2-213ENST00000460048 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
SHANK2-213ENST00000460048 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
SHANK2-213ENST00000460048 KANK1Q14678 1352 aa25.35■■□□□ 1.65
SHANK2-213ENST00000460048 PKD2Q13563 968 aa25.35■■□□□ 1.65
SHANK2-213ENST00000460048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.35■■□□□ 1.654e-7■□□□□ 10.4
SHANK2-213ENST00000460048 ANKRD50Q9ULJ7 1429 aa25.35■■□□□ 1.65
SHANK2-213ENST00000460048 FBXO41Q8TF61 875 aa25.34■■□□□ 1.65
SHANK2-213ENST00000460048 UGGT1Q9NYU2 1555 aa25.34■■□□□ 1.65
SHANK2-213ENST00000460048 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
SHANK2-213ENST00000460048 CERKQ8TCT0 537 aa25.32■■□□□ 1.64
SHANK2-213ENST00000460048 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
SHANK2-213ENST00000460048 LTBP4Q8N2S1 1624 aa25.29■■□□□ 1.64
SHANK2-213ENST00000460048 UBR1Q8IWV7 1749 aa25.29■■□□□ 1.64
SHANK2-213ENST00000460048 UNC13BO14795 1591 aa25.28■■□□□ 1.64
SHANK2-213ENST00000460048 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
SHANK2-213ENST00000460048 EFCAB6Q5THR3 1501 aa25.27■■□□□ 1.64
SHANK2-213ENST00000460048 THEMISQ8N1K5 641 aaPredicted RBP25.27■■□□□ 1.64
SHANK2-213ENST00000460048 TET3O43151 1660 aa25.23■■□□□ 1.63
SHANK2-213ENST00000460048 GCC2Q8IWJ2 1684 aa25.22■■□□□ 1.63
SHANK2-213ENST00000460048 ITGAEP38570 1179 aa25.21■■□□□ 1.63
SHANK2-213ENST00000460048 PIK3C2BO00750 1634 aa25.21■■□□□ 1.63
SHANK2-213ENST00000460048 SYNMO15061 1565 aa25.21■■□□□ 1.63
SHANK2-213ENST00000460048 ANKLE2Q86XL3 938 aa25.2■■□□□ 1.62
SHANK2-213ENST00000460048 MED14O60244 1454 aa25.2■■□□□ 1.62
SHANK2-213ENST00000460048 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
SHANK2-213ENST00000460048 NOS1P29475 1434 aa25.19■■□□□ 1.62
SHANK2-213ENST00000460048 RPRD2Q5VT52 1461 aaKnown RBP25.18■■□□□ 1.62
SHANK2-213ENST00000460048 IQGAP3Q86VI3 1631 aa25.18■■□□□ 1.62
SHANK2-213ENST00000460048 ZNF335Q9H4Z2 1342 aaPredicted RBP25.16■■□□□ 1.62
SHANK2-213ENST00000460048 IQGAP1P46940 1657 aa25.16■■□□□ 1.62
SHANK2-213ENST00000460048 SLIT1O75093 1534 aa25.15■■□□□ 1.62
SHANK2-213ENST00000460048 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
SHANK2-213ENST00000460048 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
SHANK2-213ENST00000460048 E9PCH4 1651 aa25.14■■□□□ 1.62
SHANK2-213ENST00000460048 NPHP4O75161 1426 aaPredicted RBP25.14■■□□□ 1.62
SHANK2-213ENST00000460048 IDI1Q13907 227 aa25.11■■□□□ 1.61
SHANK2-213ENST00000460048 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
SHANK2-213ENST00000460048 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
SHANK2-213ENST00000460048 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
SHANK2-213ENST00000460048 SLC52A1Q9NWF4 448 aa25.06■■□□□ 1.6
SHANK2-213ENST00000460048 NUP155O75694 1391 aa25.05■■□□□ 1.6
SHANK2-213ENST00000460048 NAIPQ13075 1403 aa25.05■■□□□ 1.6
SHANK2-213ENST00000460048 LTKP29376 864 aa25.05■■□□□ 1.6
SHANK2-213ENST00000460048 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
SHANK2-213ENST00000460048 CPS1P31327 1500 aa25.03■■□□□ 1.6
SHANK2-213ENST00000460048 STAG3Q9UJ98 1225 aa25.03■■□□□ 1.6
SHANK2-213ENST00000460048 STRCP1A6NGW2 1772 aa25.03■■□□□ 1.6
SHANK2-213ENST00000460048 TXNDC2Q86VQ3 553 aa25.02■■□□□ 1.6
SHANK2-213ENST00000460048 TMEM131LA2VDJ0 1609 aa25.01■■□□□ 1.59
SHANK2-213ENST00000460048 HFM1A2PYH4 1435 aa24.99■■□□□ 1.59
SHANK2-213ENST00000460048 EID1Q9Y6B2 187 aa24.99■■□□□ 1.59
SHANK2-213ENST00000460048 SPHKAPQ2M3C7 1700 aa24.97■■□□□ 1.59
SHANK2-213ENST00000460048 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
SHANK2-213ENST00000460048 RIMS2Q9UQ26 1411 aa24.87■■□□□ 1.57
SHANK2-213ENST00000460048 LRRC7Q96NW7 1537 aa24.87■■□□□ 1.57
SHANK2-213ENST00000460048 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
SHANK2-213ENST00000460048 XIRP1Q702N8 1843 aaKnown RBP24.86■■□□□ 1.57
SHANK2-213ENST00000460048 CHGAP10645 457 aaKnown RBP24.83■■□□□ 1.57
SHANK2-213ENST00000460048 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms