RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
CCDC12-204ENST00000460035 CLTCQ00610 1675 aaKnown RBP16.48■□□□□ 0.23
CCDC12-204ENST00000460035 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
CCDC12-204ENST00000460035 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.22
CCDC12-204ENST00000460035 CEP152O94986 1710 aa16.45■□□□□ 0.22
CCDC12-204ENST00000460035 KIF3BO15066 747 aa16.45■□□□□ 0.22
CCDC12-204ENST00000460035 GGT6Q6P531 493 aa16.45■□□□□ 0.22
CCDC12-204ENST00000460035 C3P01024 1663 aa16.45■□□□□ 0.22
CCDC12-204ENST00000460035 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
CCDC12-204ENST00000460035 CNTLNQ9NXG0 1405 aa16.44■□□□□ 0.22
CCDC12-204ENST00000460035 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
CCDC12-204ENST00000460035 ESF1Q9H501 851 aaKnown RBP16.43■□□□□ 0.22
CCDC12-204ENST00000460035 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
CCDC12-204ENST00000460035 UNC13BO14795 1591 aa16.43■□□□□ 0.22
CCDC12-204ENST00000460035 PTPRMP28827 1452 aa16.42■□□□□ 0.22
CCDC12-204ENST00000460035 KDM5DQ9BY66 1539 aa16.42■□□□□ 0.22
CCDC12-204ENST00000460035 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
CCDC12-204ENST00000460035 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
CCDC12-204ENST00000460035 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
CCDC12-204ENST00000460035 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
CCDC12-204ENST00000460035 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
CCDC12-204ENST00000460035 NAIPQ13075 1403 aa16.39■□□□□ 0.21
CCDC12-204ENST00000460035 CAMSAP1Q5T5Y3 1602 aa16.39■□□□□ 0.21
CCDC12-204ENST00000460035 ABCC3O15438 1527 aa16.39■□□□□ 0.21
CCDC12-204ENST00000460035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.219e-8■■■■■ 28.3
CCDC12-204ENST00000460035 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
CCDC12-204ENST00000460035 TET3O43151 1660 aa16.35■□□□□ 0.21
CCDC12-204ENST00000460035 LMTK2Q8IWU2 1503 aa16.35■□□□□ 0.21
CCDC12-204ENST00000460035 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.2
CCDC12-204ENST00000460035 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
CCDC12-204ENST00000460035 KANK1Q14678 1352 aa16.33■□□□□ 0.2
CCDC12-204ENST00000460035 PREX1Q8TCU6 1659 aa16.33■□□□□ 0.2
CCDC12-204ENST00000460035 ZMYM3Q14202 1370 aa16.32■□□□□ 0.2
CCDC12-204ENST00000460035 PZPP20742 1482 aa16.31■□□□□ 0.2
CCDC12-204ENST00000460035 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
CCDC12-204ENST00000460035 NPATQ14207 1427 aa16.29■□□□□ 0.2
CCDC12-204ENST00000460035 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
CCDC12-204ENST00000460035 E9PCH4 1651 aa16.28■□□□□ 0.2
CCDC12-204ENST00000460035 SPATA31D1Q6ZQQ2 1576 aa16.27■□□□□ 0.2
CCDC12-204ENST00000460035 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.19
CCDC12-204ENST00000460035 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.19
CCDC12-204ENST00000460035 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.19
CCDC12-204ENST00000460035 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
CCDC12-204ENST00000460035 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
CCDC12-204ENST00000460035 NUP155O75694 1391 aa16.24■□□□□ 0.19
CCDC12-204ENST00000460035 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
CCDC12-204ENST00000460035 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
CCDC12-204ENST00000460035 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
CCDC12-204ENST00000460035 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
CCDC12-204ENST00000460035 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
CCDC12-204ENST00000460035 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
CCDC12-204ENST00000460035 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
CCDC12-204ENST00000460035 SYNMO15061 1565 aa16.19■□□□□ 0.18
CCDC12-204ENST00000460035 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
CCDC12-204ENST00000460035 TNRQ92752 1358 aa16.19■□□□□ 0.18
CCDC12-204ENST00000460035 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
CCDC12-204ENST00000460035 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
CCDC12-204ENST00000460035 NOS1P29475 1434 aa16.18■□□□□ 0.18
CCDC12-204ENST00000460035 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
CCDC12-204ENST00000460035 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
CCDC12-204ENST00000460035 HRCP23327 699 aa16.17■□□□□ 0.18
CCDC12-204ENST00000460035 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
CCDC12-204ENST00000460035 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
CCDC12-204ENST00000460035 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
CCDC12-204ENST00000460035 KIF1BO60333 1816 aa16.12■□□□□ 0.17
CCDC12-204ENST00000460035 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
CCDC12-204ENST00000460035 PTPRTO14522 1441 aa16.11■□□□□ 0.17
CCDC12-204ENST00000460035 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
CCDC12-204ENST00000460035 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
CCDC12-204ENST00000460035 TRPM2O94759 1503 aa16.11■□□□□ 0.17
CCDC12-204ENST00000460035 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
CCDC12-204ENST00000460035 HSPA2P54652 639 aa16.09■□□□□ 0.17
CCDC12-204ENST00000460035 PKD2Q13563 968 aa16.09■□□□□ 0.17
CCDC12-204ENST00000460035 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
CCDC12-204ENST00000460035 CLTCL1P53675 1640 aa16.08■□□□□ 0.17
CCDC12-204ENST00000460035 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.16
CCDC12-204ENST00000460035 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
CCDC12-204ENST00000460035 SLC52A1Q9NWF4 448 aa16.07■□□□□ 0.16
CCDC12-204ENST00000460035 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
CCDC12-204ENST00000460035 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
CCDC12-204ENST00000460035 IDI1Q13907 227 aa16.04■□□□□ 0.16
CCDC12-204ENST00000460035 FOXD1Q16676 465 aa16.04■□□□□ 0.16
CCDC12-204ENST00000460035 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
CCDC12-204ENST00000460035 SLIT1O75093 1534 aa16.03■□□□□ 0.16
CCDC12-204ENST00000460035 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
CCDC12-204ENST00000460035 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.15
CCDC12-204ENST00000460035 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
CCDC12-204ENST00000460035 NEURL4Q96JN8 1562 aa16■□□□□ 0.15
CCDC12-204ENST00000460035 PPLO60437 1756 aa15.98■□□□□ 0.15
CCDC12-204ENST00000460035 IQGAP1P46940 1657 aa15.97■□□□□ 0.15
CCDC12-204ENST00000460035 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
CCDC12-204ENST00000460035 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
CCDC12-204ENST00000460035 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
CCDC12-204ENST00000460035 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.15
CCDC12-204ENST00000460035 MED14O60244 1454 aa15.95■□□□□ 0.14
CCDC12-204ENST00000460035 SCAF11Q99590 1463 aaKnown RBP15.95■□□□□ 0.14
CCDC12-204ENST00000460035 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
CCDC12-204ENST00000460035 ZFYVE9O95405 1425 aa15.94■□□□□ 0.14
CCDC12-204ENST00000460035 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
CCDC12-204ENST00000460035 NEXMIFQ5QGS0 1516 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms