RNA–Protein interactions for RNA: ENST00000459787.1

GYPC-204, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 3

Gene GYPC, Length 758 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-204ENST00000459787 DUOX2Q9NRD8 1548 aa22.04■■□□□ 1.12
GYPC-204ENST00000459787 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
GYPC-204ENST00000459787 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
GYPC-204ENST00000459787 DNMT1P26358 1616 aaKnown RBP22.02■■□□□ 1.11
GYPC-204ENST00000459787 PREX1Q8TCU6 1659 aa22.01■■□□□ 1.11
GYPC-204ENST00000459787 ERBINQ96RT1 1412 aa22■■□□□ 1.11
GYPC-204ENST00000459787 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
GYPC-204ENST00000459787 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
GYPC-204ENST00000459787 NCOA1Q15788 1441 aa21.99■■□□□ 1.11
GYPC-204ENST00000459787 CLTCQ00610 1675 aaKnown RBP21.99■■□□□ 1.11
GYPC-204ENST00000459787 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
GYPC-204ENST00000459787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.96■■□□□ 1.112e-7■■□□□ 13.2
GYPC-204ENST00000459787 EIF2AK4Q9P2K8 1649 aaKnown RBP21.95■■□□□ 1.1
GYPC-204ENST00000459787 FBXO31Q5XUX0 539 aaPredicted RBP21.95■■□□□ 1.1
GYPC-204ENST00000459787 PZPP20742 1482 aa21.95■■□□□ 1.1
GYPC-204ENST00000459787 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
GYPC-204ENST00000459787 ADGRL2O95490 1459 aa21.94■■□□□ 1.1
GYPC-204ENST00000459787 RNF17Q9BXT8 1623 aaKnown RBP21.94■■□□□ 1.1
GYPC-204ENST00000459787 TNRQ92752 1358 aa21.92■■□□□ 1.1
GYPC-204ENST00000459787 ABCC3O15438 1527 aa21.9■■□□□ 1.1
GYPC-204ENST00000459787 KANK1Q14678 1352 aa21.9■■□□□ 1.1
GYPC-204ENST00000459787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
GYPC-204ENST00000459787 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
GYPC-204ENST00000459787 ANKRD50Q9ULJ7 1429 aa21.88■■□□□ 1.09
GYPC-204ENST00000459787 MROH1Q8NDA8 1641 aa21.85■■□□□ 1.09
GYPC-204ENST00000459787 PRDM15P57071 1507 aaPredicted RBP21.85■■□□□ 1.09
GYPC-204ENST00000459787 A2ML1A8K2U0 1454 aa21.84■■□□□ 1.09
GYPC-204ENST00000459787 ARHGAP31Q2M1Z3 1444 aa21.84■■□□□ 1.09
GYPC-204ENST00000459787 PKD2Q13563 968 aa21.84■■□□□ 1.09
GYPC-204ENST00000459787 PTPRTO14522 1441 aa21.83■■□□□ 1.09
GYPC-204ENST00000459787 ZC3H13Q5T200 1668 aaKnown RBP21.83■■□□□ 1.09
GYPC-204ENST00000459787 ITGAEP38570 1179 aa21.83■■□□□ 1.09
GYPC-204ENST00000459787 NLRP1Q9C000 1473 aa21.83■■□□□ 1.08
GYPC-204ENST00000459787 RRBP1Q9P2E9 1410 aaKnown RBP21.82■■□□□ 1.08
GYPC-204ENST00000459787 THEMISQ8N1K5 641 aaPredicted RBP21.82■■□□□ 1.08
GYPC-204ENST00000459787 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
GYPC-204ENST00000459787 PLA2R1Q13018 1463 aa21.81■■□□□ 1.08
GYPC-204ENST00000459787 MYO3AQ8NEV4 1616 aa21.8■■□□□ 1.08
GYPC-204ENST00000459787 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
GYPC-204ENST00000459787 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
GYPC-204ENST00000459787 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
GYPC-204ENST00000459787 DEPDC5O75140 1603 aa21.78■■□□□ 1.08
GYPC-204ENST00000459787 STRCQ7RTU9 1775 aa21.77■■□□□ 1.08
GYPC-204ENST00000459787 LMTK2Q8IWU2 1503 aa21.77■■□□□ 1.08
GYPC-204ENST00000459787 ZNF142P52746 1687 aaPredicted RBP21.77■■□□□ 1.08
GYPC-204ENST00000459787 SPATA31D1Q6ZQQ2 1576 aa21.76■■□□□ 1.07
GYPC-204ENST00000459787 VWDEQ8N2E2 1590 aa21.75■■□□□ 1.07
GYPC-204ENST00000459787 ANKLE2Q86XL3 938 aa21.75■■□□□ 1.07
GYPC-204ENST00000459787 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
GYPC-204ENST00000459787 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
GYPC-204ENST00000459787 UGGT1Q9NYU2 1555 aa21.7■■□□□ 1.06
GYPC-204ENST00000459787 FBXO41Q8TF61 875 aa21.7■■□□□ 1.06
GYPC-204ENST00000459787 CEP152O94986 1710 aa21.69■■□□□ 1.06
GYPC-204ENST00000459787 SLC52A1Q9NWF4 448 aa21.68■■□□□ 1.06
GYPC-204ENST00000459787 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
GYPC-204ENST00000459787 NUP155O75694 1391 aa21.66■■□□□ 1.06
GYPC-204ENST00000459787 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
GYPC-204ENST00000459787 NOS1P29475 1434 aa21.65■■□□□ 1.06
GYPC-204ENST00000459787 IDI1Q13907 227 aa21.65■■□□□ 1.06
GYPC-204ENST00000459787 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
GYPC-204ENST00000459787 UNC13BO14795 1591 aa21.61■■□□□ 1.05
GYPC-204ENST00000459787 EID1Q9Y6B2 187 aa21.6■■□□□ 1.05
GYPC-204ENST00000459787 NAIPQ13075 1403 aa21.6■■□□□ 1.05
GYPC-204ENST00000459787 MED14O60244 1454 aa21.59■■□□□ 1.05
GYPC-204ENST00000459787 TXNDC2Q86VQ3 553 aa21.59■■□□□ 1.05
GYPC-204ENST00000459787 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
GYPC-204ENST00000459787 ZNF335Q9H4Z2 1342 aaPredicted RBP21.58■■□□□ 1.05
GYPC-204ENST00000459787 NPHP4O75161 1426 aaPredicted RBP21.58■■□□□ 1.05
GYPC-204ENST00000459787 TET3O43151 1660 aa21.57■■□□□ 1.04
GYPC-204ENST00000459787 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
GYPC-204ENST00000459787 TMEM2Q9UHN6 1383 aa21.57■■□□□ 1.04
GYPC-204ENST00000459787 LTKP29376 864 aa21.56■■□□□ 1.04
GYPC-204ENST00000459787 ARHGAP23Q9P227 1491 aa21.56■■□□□ 1.04
GYPC-204ENST00000459787 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
GYPC-204ENST00000459787 SLIT1O75093 1534 aa21.55■■□□□ 1.04
GYPC-204ENST00000459787 NEURL4Q96JN8 1562 aa21.54■■□□□ 1.04
GYPC-204ENST00000459787 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
GYPC-204ENST00000459787 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
GYPC-204ENST00000459787 SYNMO15061 1565 aa21.53■■□□□ 1.04
GYPC-204ENST00000459787 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.04
GYPC-204ENST00000459787 HDGFP51858 240 aaKnown RBP21.52■■□□□ 1.04
GYPC-204ENST00000459787 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
GYPC-204ENST00000459787 PIK3C2BO00750 1634 aa21.5■■□□□ 1.03
GYPC-204ENST00000459787 IQSEC2Q5JU85 1478 aa21.5■■□□□ 1.03
GYPC-204ENST00000459787 POLR1AO95602 1720 aaPredicted RBP21.49■■□□□ 1.03
GYPC-204ENST00000459787 KDM5AP29375 1690 aaKnown RBP21.49■■□□□ 1.03
GYPC-204ENST00000459787 GCC2Q8IWJ2 1684 aa21.49■■□□□ 1.03
GYPC-204ENST00000459787 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
GYPC-204ENST00000459787 ADGRB3O60242 1522 aa21.46■■□□□ 1.03
GYPC-204ENST00000459787 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
GYPC-204ENST00000459787 E9PCH4 1651 aa21.44■■□□□ 1.02
GYPC-204ENST00000459787 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
GYPC-204ENST00000459787 SLC4A1APQ9BWU0 796 aaKnown RBP21.44■■□□□ 1.02
GYPC-204ENST00000459787 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
GYPC-204ENST00000459787 CPS1P31327 1500 aa21.43■■□□□ 1.02
GYPC-204ENST00000459787 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
GYPC-204ENST00000459787 ZFYVE9O95405 1425 aa21.39■■□□□ 1.02
GYPC-204ENST00000459787 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
GYPC-204ENST00000459787 BCANQ96GW7 911 aa21.39■■□□□ 1.01
GYPC-204ENST00000459787 UBAP1LF5GYI3 381 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms