RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 SHANK2Q9UPX8 1470 aa27.15■■□□□ 1.94
SCARNA2-201ENST00000458748 PTPRKQ15262 1439 aa27.14■■□□□ 1.93
SCARNA2-201ENST00000458748 EIF2AK4Q9P2K8 1649 aaKnown RBP27.13■■□□□ 1.93
SCARNA2-201ENST00000458748 KDM5DQ9BY66 1539 aa27.13■■□□□ 1.93
SCARNA2-201ENST00000458748 ABCC5O15440 1437 aa27.12■■□□□ 1.93
SCARNA2-201ENST00000458748 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
SCARNA2-201ENST00000458748 RNF17Q9BXT8 1623 aaKnown RBP27.11■■□□□ 1.93
SCARNA2-201ENST00000458748 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
SCARNA2-201ENST00000458748 DAPK1P53355 1430 aa27.09■■□□□ 1.93
SCARNA2-201ENST00000458748 WASHC2CQ9Y4E1 1318 aa27.09■■□□□ 1.93
SCARNA2-201ENST00000458748 PTPRTO14522 1441 aa27.07■■□□□ 1.92
SCARNA2-201ENST00000458748 NCOA1Q15788 1441 aa27.07■■□□□ 1.92
SCARNA2-201ENST00000458748 MYO3AQ8NEV4 1616 aa27.06■■□□□ 1.92
SCARNA2-201ENST00000458748 ZNF142P52746 1687 aaPredicted RBP27.06■■□□□ 1.92
SCARNA2-201ENST00000458748 PZPP20742 1482 aa27.04■■□□□ 1.92
SCARNA2-201ENST00000458748 ZC3H13Q5T200 1668 aaKnown RBP27.04■■□□□ 1.92
SCARNA2-201ENST00000458748 CAMSAP1Q5T5Y3 1602 aa27.03■■□□□ 1.92
SCARNA2-201ENST00000458748 KIF15Q9NS87 1388 aa27.03■■□□□ 1.92
SCARNA2-201ENST00000458748 ERBINQ96RT1 1412 aa27.01■■□□□ 1.91
SCARNA2-201ENST00000458748 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.91
SCARNA2-201ENST00000458748 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
SCARNA2-201ENST00000458748 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
SCARNA2-201ENST00000458748 RRP7BPQ9NSQ0 103 aa26.98■■□□□ 1.91
SCARNA2-201ENST00000458748 ABCC3O15438 1527 aa26.98■■□□□ 1.91
SCARNA2-201ENST00000458748 MROH1Q8NDA8 1641 aa26.98■■□□□ 1.91
SCARNA2-201ENST00000458748 NCKAP5LQ9HCH0 1330 aa26.97■■□□□ 1.91
SCARNA2-201ENST00000458748 A2ML1A8K2U0 1454 aa26.96■■□□□ 1.91
SCARNA2-201ENST00000458748 TNRQ92752 1358 aa26.96■■□□□ 1.91
SCARNA2-201ENST00000458748 PLA2R1Q13018 1463 aa26.94■■□□□ 1.9
SCARNA2-201ENST00000458748 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
SCARNA2-201ENST00000458748 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
SCARNA2-201ENST00000458748 PRDM15P57071 1507 aaPredicted RBP26.92■■□□□ 1.9
SCARNA2-201ENST00000458748 DEPDC5O75140 1603 aa26.91■■□□□ 1.9
SCARNA2-201ENST00000458748 LTBP4Q8N2S1 1624 aa26.91■■□□□ 1.9
SCARNA2-201ENST00000458748 CHIC2Q9UKJ5 165 aa26.91■■□□□ 1.9
SCARNA2-201ENST00000458748 CEP152O94986 1710 aa26.9■■□□□ 1.9
SCARNA2-201ENST00000458748 NLRP1Q9C000 1473 aa26.89■■□□□ 1.9
SCARNA2-201ENST00000458748 PKD2Q13563 968 aa26.89■■□□□ 1.9
SCARNA2-201ENST00000458748 SPATA31D1Q6ZQQ2 1576 aa26.87■■□□□ 1.89
SCARNA2-201ENST00000458748 KANK1Q14678 1352 aa26.85■■□□□ 1.89
SCARNA2-201ENST00000458748 ARHGAP31Q2M1Z3 1444 aa26.84■■□□□ 1.89
SCARNA2-201ENST00000458748 ERVK-7P63135 1459 aa26.83■■□□□ 1.89
SCARNA2-201ENST00000458748 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
SCARNA2-201ENST00000458748 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
SCARNA2-201ENST00000458748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
SCARNA2-201ENST00000458748 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
SCARNA2-201ENST00000458748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.88
SCARNA2-201ENST00000458748 CFAP65Q6ZU64 1925 aaKnown RBP26.8■■□□□ 1.88
SCARNA2-201ENST00000458748 UGGT1Q9NYU2 1555 aa26.8■■□□□ 1.88
SCARNA2-201ENST00000458748 VWDEQ8N2E2 1590 aa26.79■■□□□ 1.88
SCARNA2-201ENST00000458748 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
SCARNA2-201ENST00000458748 POLR1AO95602 1720 aaPredicted RBP26.78■■□□□ 1.88
SCARNA2-201ENST00000458748 ANKRD50Q9ULJ7 1429 aa26.77■■□□□ 1.88
SCARNA2-201ENST00000458748 ROCK1Q13464 1354 aa26.76■■□□□ 1.87
SCARNA2-201ENST00000458748 IQSEC2Q5JU85 1478 aa26.75■■□□□ 1.87
SCARNA2-201ENST00000458748 ANKLE2Q86XL3 938 aa26.72■■□□□ 1.87
SCARNA2-201ENST00000458748 NEURL4Q96JN8 1562 aa26.69■■□□□ 1.86
SCARNA2-201ENST00000458748 EFCAB6Q5THR3 1501 aa26.68■■□□□ 1.86
SCARNA2-201ENST00000458748 UBR1Q8IWV7 1749 aa26.68■■□□□ 1.86
SCARNA2-201ENST00000458748 ITGAEP38570 1179 aa26.67■■□□□ 1.86
SCARNA2-201ENST00000458748 MED14O60244 1454 aa26.66■■□□□ 1.86
SCARNA2-201ENST00000458748 UNC13BO14795 1591 aa26.65■■□□□ 1.86
SCARNA2-201ENST00000458748 RRBP1Q9P2E9 1410 aaKnown RBP26.64■■□□□ 1.85
SCARNA2-201ENST00000458748 RPRD2Q5VT52 1461 aaKnown RBP26.63■■□□□ 1.85
SCARNA2-201ENST00000458748 UBAP1LF5GYI3 381 aa26.63■■□□□ 1.85
SCARNA2-201ENST00000458748 TET3O43151 1660 aa26.62■■□□□ 1.85
SCARNA2-201ENST00000458748 KDM5AP29375 1690 aaKnown RBP26.62■■□□□ 1.85
SCARNA2-201ENST00000458748 NPHP4O75161 1426 aaPredicted RBP26.6■■□□□ 1.85
SCARNA2-201ENST00000458748 NOS1P29475 1434 aa26.6■■□□□ 1.85
SCARNA2-201ENST00000458748 GCC2Q8IWJ2 1684 aa26.6■■□□□ 1.85
SCARNA2-201ENST00000458748 PIK3C2BO00750 1634 aa26.59■■□□□ 1.85
SCARNA2-201ENST00000458748 IQGAP1P46940 1657 aa26.58■■□□□ 1.85
SCARNA2-201ENST00000458748 SLIT1O75093 1534 aa26.58■■□□□ 1.85
SCARNA2-201ENST00000458748 SYNMO15061 1565 aa26.58■■□□□ 1.85
SCARNA2-201ENST00000458748 ARHGAP23Q9P227 1491 aa26.57■■□□□ 1.84
SCARNA2-201ENST00000458748 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
SCARNA2-201ENST00000458748 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
SCARNA2-201ENST00000458748 IQGAP3Q86VI3 1631 aa26.54■■□□□ 1.84
SCARNA2-201ENST00000458748 IDI1Q13907 227 aa26.54■■□□□ 1.84
SCARNA2-201ENST00000458748 SCAF11Q99590 1463 aaKnown RBP26.54■■□□□ 1.84
SCARNA2-201ENST00000458748 CPS1P31327 1500 aa26.54■■□□□ 1.84
SCARNA2-201ENST00000458748 STAG3Q9UJ98 1225 aa26.53■■□□□ 1.84
SCARNA2-201ENST00000458748 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
SCARNA2-201ENST00000458748 TMEM2Q9UHN6 1383 aa26.5■■□□□ 1.83
SCARNA2-201ENST00000458748 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
SCARNA2-201ENST00000458748 NUP155O75694 1391 aa26.48■■□□□ 1.83
SCARNA2-201ENST00000458748 E9PCH4 1651 aa26.48■■□□□ 1.83
SCARNA2-201ENST00000458748 LTKP29376 864 aa26.48■■□□□ 1.83
SCARNA2-201ENST00000458748 ADGRB3O60242 1522 aa26.48■■□□□ 1.83
SCARNA2-201ENST00000458748 SCAF1Q9H7N4 1312 aaKnown RBP26.45■■□□□ 1.83
SCARNA2-201ENST00000458748 PIP4K2BP78356 416 aa26.44■■□□□ 1.82
SCARNA2-201ENST00000458748 ILDR2Q71H61 639 aa26.42■■□□□ 1.82
SCARNA2-201ENST00000458748 TOM1O60784 492 aa26.41■■□□□ 1.82
SCARNA2-201ENST00000458748 NAIPQ13075 1403 aa26.4■■□□□ 1.82
SCARNA2-201ENST00000458748 STRCP1A6NGW2 1772 aa26.39■■□□□ 1.82
SCARNA2-201ENST00000458748 TMEM131LA2VDJ0 1609 aa26.38■■□□□ 1.81
SCARNA2-201ENST00000458748 MYO5BQ9ULV0 1848 aa26.37■■□□□ 1.81
SCARNA2-201ENST00000458748 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
SCARNA2-201ENST00000458748 HSPA1LP34931 641 aa26.35■■□□□ 1.81
SCARNA2-201ENST00000458748 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms