RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 NCOA1Q15788 1441 aa24.84■■□□□ 1.57
COL16A1-205ENST00000458715 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.57
COL16A1-205ENST00000458715 PKD2Q13563 968 aa24.83■■□□□ 1.57
COL16A1-205ENST00000458715 ABCC5O15440 1437 aa24.83■■□□□ 1.57
COL16A1-205ENST00000458715 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.56
COL16A1-205ENST00000458715 STRCQ7RTU9 1775 aa24.82■■□□□ 1.56
COL16A1-205ENST00000458715 PZPP20742 1482 aa24.82■■□□□ 1.56
COL16A1-205ENST00000458715 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
COL16A1-205ENST00000458715 TCOF1Q13428 1488 aaKnown RBP24.81■■□□□ 1.56
COL16A1-205ENST00000458715 FBXO31Q5XUX0 539 aaPredicted RBP24.8■■□□□ 1.56
COL16A1-205ENST00000458715 TNRQ92752 1358 aa24.8■■□□□ 1.56
COL16A1-205ENST00000458715 KIF15Q9NS87 1388 aa24.8■■□□□ 1.56
COL16A1-205ENST00000458715 RRP7BPQ9NSQ0 103 aa24.79■■□□□ 1.56
COL16A1-205ENST00000458715 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
COL16A1-205ENST00000458715 EIF2AK4Q9P2K8 1649 aaKnown RBP24.79■■□□□ 1.56
COL16A1-205ENST00000458715 DAPK1P53355 1430 aa24.78■■□□□ 1.56
COL16A1-205ENST00000458715 PLA2R1Q13018 1463 aa24.78■■□□□ 1.56
COL16A1-205ENST00000458715 A2ML1A8K2U0 1454 aa24.77■■□□□ 1.56
COL16A1-205ENST00000458715 CEP170BQ9Y4F5 1589 aaPredicted RBP24.77■■□□□ 1.56
COL16A1-205ENST00000458715 ANKRD30AQ9BXX3 1397 aa24.77■■□□□ 1.56
COL16A1-205ENST00000458715 MYO3AQ8NEV4 1616 aa24.76■■□□□ 1.55
COL16A1-205ENST00000458715 ERBINQ96RT1 1412 aa24.76■■□□□ 1.55
COL16A1-205ENST00000458715 RNF17Q9BXT8 1623 aaKnown RBP24.75■■□□□ 1.55
COL16A1-205ENST00000458715 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
COL16A1-205ENST00000458715 NCKAP5LQ9HCH0 1330 aa24.73■■□□□ 1.55
COL16A1-205ENST00000458715 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
COL16A1-205ENST00000458715 DNMT1P26358 1616 aaKnown RBP24.72■■□□□ 1.55
COL16A1-205ENST00000458715 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
COL16A1-205ENST00000458715 NLRP1Q9C000 1473 aa24.71■■□□□ 1.55
COL16A1-205ENST00000458715 ABCC3O15438 1527 aa24.71■■□□□ 1.55
COL16A1-205ENST00000458715 ZC3H13Q5T200 1668 aaKnown RBP24.7■■□□□ 1.54
COL16A1-205ENST00000458715 CHIC2Q9UKJ5 165 aa24.7■■□□□ 1.54
COL16A1-205ENST00000458715 KANK1Q14678 1352 aa24.69■■□□□ 1.54
COL16A1-205ENST00000458715 CROCC2H7BZ55 1655 aa24.69■■□□□ 1.54
COL16A1-205ENST00000458715 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
COL16A1-205ENST00000458715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.54
COL16A1-205ENST00000458715 ARHGAP31Q2M1Z3 1444 aa24.63■■□□□ 1.53
COL16A1-205ENST00000458715 MROH1Q8NDA8 1641 aa24.63■■□□□ 1.53
COL16A1-205ENST00000458715 PRDM15P57071 1507 aaPredicted RBP24.61■■□□□ 1.53
COL16A1-205ENST00000458715 ADGRL2O95490 1459 aa24.61■■□□□ 1.53
COL16A1-205ENST00000458715 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
COL16A1-205ENST00000458715 UGGT1Q9NYU2 1555 aa24.6■■□□□ 1.53
COL16A1-205ENST00000458715 ERVK-7P63135 1459 aa24.6■■□□□ 1.53
COL16A1-205ENST00000458715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.53
COL16A1-205ENST00000458715 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.53
COL16A1-205ENST00000458715 LTBP4Q8N2S1 1624 aa24.58■■□□□ 1.53
COL16A1-205ENST00000458715 ZNF335Q9H4Z2 1342 aaPredicted RBP24.56■■□□□ 1.52
COL16A1-205ENST00000458715 DEPDC5O75140 1603 aa24.54■■□□□ 1.52
COL16A1-205ENST00000458715 ANKRD50Q9ULJ7 1429 aa24.54■■□□□ 1.52
COL16A1-205ENST00000458715 CEP152O94986 1710 aa24.52■■□□□ 1.52
COL16A1-205ENST00000458715 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
COL16A1-205ENST00000458715 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
COL16A1-205ENST00000458715 MED14O60244 1454 aa24.5■■□□□ 1.51
COL16A1-205ENST00000458715 NPHP4O75161 1426 aaPredicted RBP24.48■■□□□ 1.51
COL16A1-205ENST00000458715 STAG3Q9UJ98 1225 aa24.48■■□□□ 1.51
COL16A1-205ENST00000458715 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
COL16A1-205ENST00000458715 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
COL16A1-205ENST00000458715 EID1Q9Y6B2 187 aa24.46■■□□□ 1.51
COL16A1-205ENST00000458715 NEURL4Q96JN8 1562 aa24.45■■□□□ 1.5
COL16A1-205ENST00000458715 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
COL16A1-205ENST00000458715 SLC52A1Q9NWF4 448 aa24.44■■□□□ 1.5
COL16A1-205ENST00000458715 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
COL16A1-205ENST00000458715 CFAP65Q6ZU64 1925 aaKnown RBP24.42■■□□□ 1.5
COL16A1-205ENST00000458715 CPS1P31327 1500 aa24.41■■□□□ 1.5
COL16A1-205ENST00000458715 RPRD2Q5VT52 1461 aaKnown RBP24.41■■□□□ 1.5
COL16A1-205ENST00000458715 IDI1Q13907 227 aa24.41■■□□□ 1.5
COL16A1-205ENST00000458715 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
COL16A1-205ENST00000458715 ITGAEP38570 1179 aa24.4■■□□□ 1.5
COL16A1-205ENST00000458715 SCAF11Q99590 1463 aaKnown RBP24.39■■□□□ 1.5
COL16A1-205ENST00000458715 NOS1P29475 1434 aa24.39■■□□□ 1.5
COL16A1-205ENST00000458715 EFCAB6Q5THR3 1501 aa24.39■■□□□ 1.49
COL16A1-205ENST00000458715 SLIT1O75093 1534 aa24.38■■□□□ 1.49
COL16A1-205ENST00000458715 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
COL16A1-205ENST00000458715 ARHGAP23Q9P227 1491 aa24.38■■□□□ 1.49
COL16A1-205ENST00000458715 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
COL16A1-205ENST00000458715 LTKP29376 864 aa24.36■■□□□ 1.49
COL16A1-205ENST00000458715 IQGAP1P46940 1657 aa24.34■■□□□ 1.49
COL16A1-205ENST00000458715 TOM1O60784 492 aa24.34■■□□□ 1.49
COL16A1-205ENST00000458715 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.49
COL16A1-205ENST00000458715 KDM5AP29375 1690 aaKnown RBP24.32■■□□□ 1.48
COL16A1-205ENST00000458715 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
COL16A1-205ENST00000458715 PIK3C2BO00750 1634 aa24.31■■□□□ 1.48
COL16A1-205ENST00000458715 NUP155O75694 1391 aa24.3■■□□□ 1.48
COL16A1-205ENST00000458715 UNC13BO14795 1591 aa24.29■■□□□ 1.48
COL16A1-205ENST00000458715 TET3O43151 1660 aa24.29■■□□□ 1.48
COL16A1-205ENST00000458715 SYNMO15061 1565 aa24.29■■□□□ 1.48
COL16A1-205ENST00000458715 ADGRB3O60242 1522 aa24.24■■□□□ 1.47
COL16A1-205ENST00000458715 GCC2Q8IWJ2 1684 aa24.22■■□□□ 1.47
COL16A1-205ENST00000458715 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
COL16A1-205ENST00000458715 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
COL16A1-205ENST00000458715 BCANQ96GW7 911 aa24.2■■□□□ 1.46
COL16A1-205ENST00000458715 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
COL16A1-205ENST00000458715 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
COL16A1-205ENST00000458715 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
COL16A1-205ENST00000458715 PIP4K2BP78356 416 aa24.18■■□□□ 1.46
COL16A1-205ENST00000458715 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
COL16A1-205ENST00000458715 KCNA6P17658 529 aa24.17■■□□□ 1.46
COL16A1-205ENST00000458715 SLC26A8Q96RN1 970 aa24.16■■□□□ 1.46
COL16A1-205ENST00000458715 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
COL16A1-205ENST00000458715 E9PCH4 1651 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms