RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 KDM5DQ9BY66 1539 aa41.23■■■■■ 4.19
SMIM12-205ENST00000456842 NCOA1Q15788 1441 aa41.21■■■■■ 4.19
SMIM12-205ENST00000456842 RRP7BPQ9NSQ0 103 aa41.21■■■■■ 4.19
SMIM12-205ENST00000456842 TCOF1Q13428 1488 aaKnown RBP41.19■■■■■ 4.18
SMIM12-205ENST00000456842 CERKQ8TCT0 537 aa41.18■■■■■ 4.18
SMIM12-205ENST00000456842 CAMSAP1Q5T5Y3 1602 aa41.18■■■■■ 4.18
SMIM12-205ENST00000456842 DAPK1P53355 1430 aa41.18■■■■■ 4.18
SMIM12-205ENST00000456842 MYO3AQ8NEV4 1616 aa41.17■■■■■ 4.18
SMIM12-205ENST00000456842 NCKAP5LQ9HCH0 1330 aa41.17■■■■■ 4.18
SMIM12-205ENST00000456842 CHIC2Q9UKJ5 165 aa41.16■■■■■ 4.18
SMIM12-205ENST00000456842 KIF15Q9NS87 1388 aa41.15■■■■■ 4.18
SMIM12-205ENST00000456842 PTPRTO14522 1441 aa41.14■■■■■ 4.18
SMIM12-205ENST00000456842 PZPP20742 1482 aa41.14■■■■■ 4.18
SMIM12-205ENST00000456842 TNRQ92752 1358 aa41.13■■■■■ 4.18
SMIM12-205ENST00000456842 SHANK2Q9UPX8 1470 aa41.13■■■■■ 4.17
SMIM12-205ENST00000456842 FAM135AQ9P2D6 1515 aa41.13■■■■■ 4.17
SMIM12-205ENST00000456842 DUOX2Q9NRD8 1548 aa41.12■■■■■ 4.17
SMIM12-205ENST00000456842 CEP170BQ9Y4F5 1589 aaPredicted RBP41.12■■■■■ 4.17
SMIM12-205ENST00000456842 FAM50AQ14320 339 aaKnown RBP41.1■■■■■ 4.17
SMIM12-205ENST00000456842 RNF17Q9BXT8 1623 aaKnown RBP41.1■■■■■ 4.17
SMIM12-205ENST00000456842 DNMT1P26358 1616 aaKnown RBP41.07■■■■■ 4.17
SMIM12-205ENST00000456842 CROCC2H7BZ55 1655 aa41.07■■■■■ 4.16
SMIM12-205ENST00000456842 ABCC3O15438 1527 aa41.06■■■■■ 4.16
SMIM12-205ENST00000456842 ZNF142P52746 1687 aaPredicted RBP41.06■■■■■ 4.16
SMIM12-205ENST00000456842 EIF2AK4Q9P2K8 1649 aaKnown RBP41.05■■■■■ 4.16
SMIM12-205ENST00000456842 A2ML1A8K2U0 1454 aa41.05■■■■■ 4.16
SMIM12-205ENST00000456842 MROH1Q8NDA8 1641 aa41.03■■■■■ 4.16
SMIM12-205ENST00000456842 PPARGC1BQ86YN6 1023 aaKnown RBP41■■■■■ 4.15
SMIM12-205ENST00000456842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41■■■■■ 4.15
SMIM12-205ENST00000456842 ANKRD30AQ9BXX3 1397 aa40.99■■■■■ 4.15
SMIM12-205ENST00000456842 PLA2R1Q13018 1463 aa40.98■■■■■ 4.15
SMIM12-205ENST00000456842 PKD2Q13563 968 aa40.98■■■■■ 4.15
SMIM12-205ENST00000456842 ERBINQ96RT1 1412 aa40.98■■■■■ 4.15
SMIM12-205ENST00000456842 ZC3H13Q5T200 1668 aaKnown RBP40.9■■■■■ 4.14
SMIM12-205ENST00000456842 CEP152O94986 1710 aa40.88■■■■■ 4.13
SMIM12-205ENST00000456842 NLRP1Q9C000 1473 aa40.87■■■■■ 4.13
SMIM12-205ENST00000456842 ERVK-7P63135 1459 aa40.86■■■■■ 4.13
SMIM12-205ENST00000456842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.86■■■■■ 4.13
SMIM12-205ENST00000456842 ZNF335Q9H4Z2 1342 aaPredicted RBP40.85■■■■■ 4.13
SMIM12-205ENST00000456842 LTBP4Q8N2S1 1624 aa40.85■■■■■ 4.13
SMIM12-205ENST00000456842 PRDM15P57071 1507 aaPredicted RBP40.84■■■■■ 4.13
SMIM12-205ENST00000456842 THEMISQ8N1K5 641 aaPredicted RBP40.84■■■■■ 4.13
SMIM12-205ENST00000456842 SPATA31D1Q6ZQQ2 1576 aa40.82■■■■■ 4.13
SMIM12-205ENST00000456842 ADGRL2O95490 1459 aa40.82■■■■■ 4.12
SMIM12-205ENST00000456842 UGGT1Q9NYU2 1555 aa40.79■■■■■ 4.12
SMIM12-205ENST00000456842 KANK1Q14678 1352 aa40.79■■■■■ 4.12
SMIM12-205ENST00000456842 ANKLE2Q86XL3 938 aa40.78■■■■■ 4.12
SMIM12-205ENST00000456842 CFAP65Q6ZU64 1925 aaKnown RBP40.77■■■■■ 4.12
SMIM12-205ENST00000456842 ARHGAP31Q2M1Z3 1444 aa40.75■■■■■ 4.11
SMIM12-205ENST00000456842 DEPDC5O75140 1603 aa40.75■■■■■ 4.11
SMIM12-205ENST00000456842 ANKRD50Q9ULJ7 1429 aa40.7■■■■■ 4.11
SMIM12-205ENST00000456842 NEURL4Q96JN8 1562 aa40.69■■■■■ 4.11
SMIM12-205ENST00000456842 ITGAEP38570 1179 aa40.69■■■■■ 4.1
SMIM12-205ENST00000456842 VWDEQ8N2E2 1590 aa40.65■■■■■ 4.1
SMIM12-205ENST00000456842 LMTK2Q8IWU2 1503 aa40.62■■■■■ 4.09
SMIM12-205ENST00000456842 POLR1AO95602 1720 aaPredicted RBP40.62■■■■■ 4.09
SMIM12-205ENST00000456842 NPHP4O75161 1426 aaPredicted RBP40.6■■■■■ 4.09
SMIM12-205ENST00000456842 MED14O60244 1454 aa40.54■■■■■ 4.08
SMIM12-205ENST00000456842 IQSEC2Q5JU85 1478 aa40.54■■■■■ 4.08
SMIM12-205ENST00000456842 ROCK1Q13464 1354 aa40.54■■■■■ 4.08
SMIM12-205ENST00000456842 IDI1Q13907 227 aa40.54■■■■■ 4.08
SMIM12-205ENST00000456842 UBR1Q8IWV7 1749 aa40.52■■■■■ 4.08
SMIM12-205ENST00000456842 LTKP29376 864 aa40.51■■■■■ 4.08
SMIM12-205ENST00000456842 STAG3Q9UJ98 1225 aa40.51■■■■■ 4.08
SMIM12-205ENST00000456842 EFCAB6Q5THR3 1501 aa40.5■■■■■ 4.07
SMIM12-205ENST00000456842 TXNDC2Q86VQ3 553 aa40.49■■■■■ 4.07
SMIM12-205ENST00000456842 NOS1P29475 1434 aa40.46■■■■■ 4.07
SMIM12-205ENST00000456842 PIK3C2BO00750 1634 aa40.45■■■■■ 4.07
SMIM12-205ENST00000456842 UBAP1LF5GYI3 381 aa40.45■■■■■ 4.07
SMIM12-205ENST00000456842 SYNMO15061 1565 aa40.44■■■■■ 4.06
SMIM12-205ENST00000456842 SCAF11Q99590 1463 aaKnown RBP40.43■■■■■ 4.06
SMIM12-205ENST00000456842 ARHGAP23Q9P227 1491 aa40.43■■■■■ 4.06
SMIM12-205ENST00000456842 IQGAP1P46940 1657 aa40.41■■■■■ 4.06
SMIM12-205ENST00000456842 EID1Q9Y6B2 187 aa40.4■■■■■ 4.06
SMIM12-205ENST00000456842 SLIT1O75093 1534 aa40.4■■■■■ 4.06
SMIM12-205ENST00000456842 TMEM2Q9UHN6 1383 aa40.39■■■■■ 4.06
SMIM12-205ENST00000456842 UNC13BO14795 1591 aa40.36■■■■■ 4.05
SMIM12-205ENST00000456842 CPS1P31327 1500 aa40.36■■■■■ 4.05
SMIM12-205ENST00000456842 RRBP1Q9P2E9 1410 aaKnown RBP40.35■■■■■ 4.05
SMIM12-205ENST00000456842 SLC52A1Q9NWF4 448 aa40.35■■■■■ 4.05
SMIM12-205ENST00000456842 RPRD2Q5VT52 1461 aaKnown RBP40.33■■■■■ 4.05
SMIM12-205ENST00000456842 NUP155O75694 1391 aa40.33■■■■■ 4.05
SMIM12-205ENST00000456842 TET3O43151 1660 aa40.32■■■■■ 4.05
SMIM12-205ENST00000456842 ADGRB3O60242 1522 aa40.24■■■■■ 4.03
SMIM12-205ENST00000456842 GCC2Q8IWJ2 1684 aa40.21■■■■■ 4.03
SMIM12-205ENST00000456842 SENP3Q9H4L4 574 aaPredicted RBP40.21■■■■■ 4.03
SMIM12-205ENST00000456842 STRCP1A6NGW2 1772 aa40.2■■■■■ 4.03
SMIM12-205ENST00000456842 IQGAP3Q86VI3 1631 aa40.2■■■■■ 4.03
SMIM12-205ENST00000456842 CHGAP10645 457 aaKnown RBP40.2■■■■■ 4.03
SMIM12-205ENST00000456842 PIP4K2BP78356 416 aa40.2■■■■■ 4.03
SMIM12-205ENST00000456842 KDM5AP29375 1690 aaKnown RBP40.2■■■■■ 4.03
SMIM12-205ENST00000456842 SCAF1Q9H7N4 1312 aaKnown RBP40.19■■■■■ 4.02
SMIM12-205ENST00000456842 E9PCH4 1651 aa40.18■■■■■ 4.02
SMIM12-205ENST00000456842 TOM1O60784 492 aa40.18■■■■■ 4.02
SMIM12-205ENST00000456842 SLC26A8Q96RN1 970 aa40.18■■■■■ 4.02
SMIM12-205ENST00000456842 LRRC7Q96NW7 1537 aa40.16■■■■■ 4.02
SMIM12-205ENST00000456842 BCANQ96GW7 911 aa40.13■■■■■ 4.01
SMIM12-205ENST00000456842 NAIPQ13075 1403 aa40.11■■■■■ 4.01
SMIM12-205ENST00000456842 RIMS2Q9UQ26 1411 aa40.08■■■■■ 4.01
SMIM12-205ENST00000456842 ZFYVE9O95405 1425 aa40.07■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms