RNA–Protein interactions for RNA: ENST00000456676.6

MLH1-213, Transcript of mutL homolog 1, humanhuman

TSL 1 (best)

Gene MLH1, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH1-213ENST00000456676 PIP4K2BP78356 416 aa12.94□□□□□ -0.34
MLH1-213ENST00000456676 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
MLH1-213ENST00000456676 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
MLH1-213ENST00000456676 PZPP20742 1482 aa12.93□□□□□ -0.34
MLH1-213ENST00000456676 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
MLH1-213ENST00000456676 MED14O60244 1454 aa12.92□□□□□ -0.34
MLH1-213ENST00000456676 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
MLH1-213ENST00000456676 DEPDC5O75140 1603 aa12.91□□□□□ -0.34
MLH1-213ENST00000456676 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
MLH1-213ENST00000456676 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
MLH1-213ENST00000456676 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
MLH1-213ENST00000456676 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
MLH1-213ENST00000456676 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
MLH1-213ENST00000456676 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
MLH1-213ENST00000456676 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
MLH1-213ENST00000456676 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
MLH1-213ENST00000456676 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
MLH1-213ENST00000456676 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
MLH1-213ENST00000456676 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
MLH1-213ENST00000456676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
MLH1-213ENST00000456676 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
MLH1-213ENST00000456676 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
MLH1-213ENST00000456676 SYNMO15061 1565 aa12.85□□□□□ -0.35
MLH1-213ENST00000456676 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
MLH1-213ENST00000456676 KIF3BO15066 747 aa12.85□□□□□ -0.35
MLH1-213ENST00000456676 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
MLH1-213ENST00000456676 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
MLH1-213ENST00000456676 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
MLH1-213ENST00000456676 CCDC141Q6ZP82 1450 aa12.84□□□□□ -0.35
MLH1-213ENST00000456676 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
MLH1-213ENST00000456676 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
MLH1-213ENST00000456676 WASHC2CQ9Y4E1 1318 aa12.84□□□□□ -0.35
MLH1-213ENST00000456676 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
MLH1-213ENST00000456676 STRCP1A6NGW2 1772 aa12.81□□□□□ -0.36
MLH1-213ENST00000456676 CAMSAP2Q08AD1 1489 aa12.79□□□□□ -0.36
MLH1-213ENST00000456676 ARHGEF5Q12774 1597 aa12.79□□□□□ -0.36
MLH1-213ENST00000456676 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
MLH1-213ENST00000456676 ABCC3O15438 1527 aa12.78□□□□□ -0.36
MLH1-213ENST00000456676 RGS17Q9UGC6 210 aaPredicted RBP12.77□□□□□ -0.36
MLH1-213ENST00000456676 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
MLH1-213ENST00000456676 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
MLH1-213ENST00000456676 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
MLH1-213ENST00000456676 MAST1Q9Y2H9 1570 aa12.75□□□□□ -0.37
MLH1-213ENST00000456676 EIF2AK4Q9P2K8 1649 aaKnown RBP12.75□□□□□ -0.37
MLH1-213ENST00000456676 ARHGAP23Q9P227 1491 aa12.74□□□□□ -0.37
MLH1-213ENST00000456676 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
MLH1-213ENST00000456676 SLIT1O75093 1534 aa12.73□□□□□ -0.37
MLH1-213ENST00000456676 TSPY4P0CV99 314 aa12.73□□□□□ -0.37
MLH1-213ENST00000456676 TSPY10P0CW01 314 aa12.73□□□□□ -0.37
MLH1-213ENST00000456676 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
MLH1-213ENST00000456676 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
MLH1-213ENST00000456676 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
MLH1-213ENST00000456676 XIRP1Q702N8 1843 aaKnown RBP12.71□□□□□ -0.37
MLH1-213ENST00000456676 ARHGAP31Q2M1Z3 1444 aa12.69□□□□□ -0.38
MLH1-213ENST00000456676 LTKP29376 864 aa12.69□□□□□ -0.38
MLH1-213ENST00000456676 TXNDC2Q86VQ3 553 aa12.69□□□□□ -0.38
MLH1-213ENST00000456676 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
MLH1-213ENST00000456676 CEP152O94986 1710 aa12.68□□□□□ -0.38
MLH1-213ENST00000456676 EID1Q9Y6B2 187 aa12.67□□□□□ -0.38
MLH1-213ENST00000456676 LRRC9Q6ZRR7 1453 aa12.66□□□□□ -0.38
MLH1-213ENST00000456676 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
MLH1-213ENST00000456676 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
MLH1-213ENST00000456676 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.39
MLH1-213ENST00000456676 PRDM15P57071 1507 aaPredicted RBP12.64□□□□□ -0.39
MLH1-213ENST00000456676 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
MLH1-213ENST00000456676 KCNA6P17658 529 aa12.64□□□□□ -0.39
MLH1-213ENST00000456676 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
MLH1-213ENST00000456676 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
MLH1-213ENST00000456676 PIK3C2BO00750 1634 aa12.63□□□□□ -0.39
MLH1-213ENST00000456676 NWD1Q149M9 1564 aa12.61□□□□□ -0.39
MLH1-213ENST00000456676 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
MLH1-213ENST00000456676 TET3O43151 1660 aa12.61□□□□□ -0.39
MLH1-213ENST00000456676 MYOM3Q5VTT5 1437 aa12.61□□□□□ -0.39
MLH1-213ENST00000456676 ERBINQ96RT1 1412 aa12.61□□□□□ -0.39
MLH1-213ENST00000456676 EFCAB6Q5THR3 1501 aa12.61□□□□□ -0.39
MLH1-213ENST00000456676 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
MLH1-213ENST00000456676 CFAP65Q6ZU64 1925 aaKnown RBP12.59□□□□□ -0.39
MLH1-213ENST00000456676 LMTK2Q8IWU2 1503 aa12.59□□□□□ -0.39
MLH1-213ENST00000456676 JCADQ9P266 1359 aa12.58□□□□□ -0.4
MLH1-213ENST00000456676 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
MLH1-213ENST00000456676 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
MLH1-213ENST00000456676 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
MLH1-213ENST00000456676 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
MLH1-213ENST00000456676 MSH6P52701 1360 aa12.57□□□□□ -0.4
MLH1-213ENST00000456676 KANK1Q14678 1352 aa12.57□□□□□ -0.4
MLH1-213ENST00000456676 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
MLH1-213ENST00000456676 IDI1Q13907 227 aa12.55□□□□□ -0.4
MLH1-213ENST00000456676 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
MLH1-213ENST00000456676 NOS1P29475 1434 aa12.55□□□□□ -0.4
MLH1-213ENST00000456676 SLC26A8Q96RN1 970 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 ABCC5O15440 1437 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
MLH1-213ENST00000456676 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
MLH1-213ENST00000456676 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
MLH1-213ENST00000456676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.411e-8■■□□□ 11.4
MLH1-213ENST00000456676 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
MLH1-213ENST00000456676 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms