RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 MROH2AA6NES4 1674 aa28.37■■■□□ 2.13
SBDSP1-205ENST00000456312 FAM135AQ9P2D6 1515 aa28.37■■■□□ 2.13
SBDSP1-205ENST00000456312 ANKRD50Q9ULJ7 1429 aa28.35■■■□□ 2.13
SBDSP1-205ENST00000456312 CLTCQ00610 1675 aaKnown RBP28.35■■■□□ 2.13
SBDSP1-205ENST00000456312 NAIPQ13075 1403 aa28.35■■■□□ 2.13
SBDSP1-205ENST00000456312 UNC13BO14795 1591 aa28.34■■■□□ 2.13
SBDSP1-205ENST00000456312 ZC3H13Q5T200 1668 aaKnown RBP28.33■■■□□ 2.13
SBDSP1-205ENST00000456312 HFM1A2PYH4 1435 aa28.33■■■□□ 2.13
SBDSP1-205ENST00000456312 VWDEQ8N2E2 1590 aa28.33■■■□□ 2.12
SBDSP1-205ENST00000456312 KDM5DQ9BY66 1539 aa28.32■■■□□ 2.12
SBDSP1-205ENST00000456312 CEP152O94986 1710 aa28.32■■■□□ 2.12
SBDSP1-205ENST00000456312 KIF3BO15066 747 aa28.31■■■□□ 2.12
SBDSP1-205ENST00000456312 MLECQ14165 292 aa28.31■■■□□ 2.12
SBDSP1-205ENST00000456312 C3P01024 1663 aa28.31■■■□□ 2.12
SBDSP1-205ENST00000456312 PTPRMP28827 1452 aa28.28■■■□□ 2.12
SBDSP1-205ENST00000456312 ABCC3O15438 1527 aa28.26■■■□□ 2.11
SBDSP1-205ENST00000456312 PPP6R1Q9UPN7 881 aa28.25■■■□□ 2.11
SBDSP1-205ENST00000456312 CNTLNQ9NXG0 1405 aa28.25■■■□□ 2.11
SBDSP1-205ENST00000456312 GGT6Q6P531 493 aa28.24■■■□□ 2.11
SBDSP1-205ENST00000456312 CAMSAP1Q5T5Y3 1602 aa28.22■■■□□ 2.11
SBDSP1-205ENST00000456312 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
SBDSP1-205ENST00000456312 IQGAP3Q86VI3 1631 aa28.21■■■□□ 2.11
SBDSP1-205ENST00000456312 TET3O43151 1660 aa28.15■■■□□ 2.1
SBDSP1-205ENST00000456312 SETD1BQ9UPS6 1966 aaKnown RBP28.14■■■□□ 2.1
SBDSP1-205ENST00000456312 ZMYM3Q14202 1370 aa28.12■■■□□ 2.09
SBDSP1-205ENST00000456312 EFCAB6Q5THR3 1501 aa28.12■■■□□ 2.09
SBDSP1-205ENST00000456312 CFAP65Q6ZU64 1925 aaKnown RBP28.11■■■□□ 2.09
SBDSP1-205ENST00000456312 PZPP20742 1482 aa28.1■■■□□ 2.09
SBDSP1-205ENST00000456312 WASHC2CQ9Y4E1 1318 aa28.09■■■□□ 2.09
SBDSP1-205ENST00000456312 ARHGAP31Q2M1Z3 1444 aa28.09■■■□□ 2.09
SBDSP1-205ENST00000456312 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
SBDSP1-205ENST00000456312 PREX1Q8TCU6 1659 aa28.08■■■□□ 2.09
SBDSP1-205ENST00000456312 E9PCH4 1651 aa28.07■■■□□ 2.08
SBDSP1-205ENST00000456312 KANK1Q14678 1352 aa28.06■■■□□ 2.08
SBDSP1-205ENST00000456312 CEBPAP49715 358 aaPredicted RBP28.05■■■□□ 2.08
SBDSP1-205ENST00000456312 SPATA31D1Q6ZQQ2 1576 aa28.05■■■□□ 2.08
SBDSP1-205ENST00000456312 NPATQ14207 1427 aa28.04■■■□□ 2.08
SBDSP1-205ENST00000456312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.04■■■□□ 2.08
SBDSP1-205ENST00000456312 ESF1Q9H501 851 aaKnown RBP28.04■■■□□ 2.08
SBDSP1-205ENST00000456312 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.07
SBDSP1-205ENST00000456312 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
SBDSP1-205ENST00000456312 NUP155O75694 1391 aa28■■■□□ 2.07
SBDSP1-205ENST00000456312 MYO3AQ8NEV4 1616 aa28■■■□□ 2.07
SBDSP1-205ENST00000456312 ERVK-7P63135 1459 aa27.99■■■□□ 2.07
SBDSP1-205ENST00000456312 RPRD2Q5VT52 1461 aaKnown RBP27.99■■■□□ 2.07
SBDSP1-205ENST00000456312 ZNF142P52746 1687 aaPredicted RBP27.98■■■□□ 2.07
SBDSP1-205ENST00000456312 SYNMO15061 1565 aa27.94■■■□□ 2.06
SBDSP1-205ENST00000456312 NOS1P29475 1434 aa27.93■■■□□ 2.06
SBDSP1-205ENST00000456312 FBXO31Q5XUX0 539 aaPredicted RBP27.93■■■□□ 2.06
SBDSP1-205ENST00000456312 SPHKAPQ2M3C7 1700 aa27.92■■■□□ 2.06
SBDSP1-205ENST00000456312 LMTK3Q96Q04 1460 aa27.92■■■□□ 2.06
SBDSP1-205ENST00000456312 HRCP23327 699 aa27.92■■■□□ 2.06
SBDSP1-205ENST00000456312 PIK3C2BO00750 1634 aa27.89■■■□□ 2.06
SBDSP1-205ENST00000456312 PLPPR3Q6T4P5 718 aa27.88■■■□□ 2.05
SBDSP1-205ENST00000456312 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
SBDSP1-205ENST00000456312 ACIN1Q9UKV3 1341 aaKnown RBP27.87■■■□□ 2.05
SBDSP1-205ENST00000456312 TNRQ92752 1358 aa27.86■■■□□ 2.05
SBDSP1-205ENST00000456312 PTPRTO14522 1441 aa27.84■■■□□ 2.05
SBDSP1-205ENST00000456312 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
SBDSP1-205ENST00000456312 KDM5AP29375 1690 aaKnown RBP27.83■■■□□ 2.05
SBDSP1-205ENST00000456312 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
SBDSP1-205ENST00000456312 UBR1Q8IWV7 1749 aa27.82■■■□□ 2.04
SBDSP1-205ENST00000456312 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
SBDSP1-205ENST00000456312 A2ML1A8K2U0 1454 aa27.81■■■□□ 2.04
SBDSP1-205ENST00000456312 MYO5BQ9ULV0 1848 aa27.79■■■□□ 2.04
SBDSP1-205ENST00000456312 TRPM2O94759 1503 aa27.79■■■□□ 2.04
SBDSP1-205ENST00000456312 PLA2R1Q13018 1463 aa27.79■■■□□ 2.04
SBDSP1-205ENST00000456312 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
SBDSP1-205ENST00000456312 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
SBDSP1-205ENST00000456312 SLC4A1APQ9BWU0 796 aaKnown RBP27.76■■■□□ 2.03
SBDSP1-205ENST00000456312 CLTCL1P53675 1640 aa27.75■■■□□ 2.03
SBDSP1-205ENST00000456312 PKD2Q13563 968 aa27.74■■■□□ 2.03
SBDSP1-205ENST00000456312 TMEM131LA2VDJ0 1609 aa27.72■■■□□ 2.03
SBDSP1-205ENST00000456312 STRCQ7RTU9 1775 aa27.72■■■□□ 2.03
SBDSP1-205ENST00000456312 ADGRB3O60242 1522 aa27.71■■■□□ 2.03
SBDSP1-205ENST00000456312 KIF1BO60333 1816 aa27.68■■■□□ 2.02
SBDSP1-205ENST00000456312 IDI1Q13907 227 aa27.67■■■□□ 2.02
SBDSP1-205ENST00000456312 SLC52A1Q9NWF4 448 aa27.66■■■□□ 2.02
SBDSP1-205ENST00000456312 POLR1AO95602 1720 aaPredicted RBP27.66■■■□□ 2.02
SBDSP1-205ENST00000456312 FOXD1Q16676 465 aa27.65■■■□□ 2.02
SBDSP1-205ENST00000456312 SLIT1O75093 1534 aa27.63■■■□□ 2.01
SBDSP1-205ENST00000456312 ARHGAP23Q9P227 1491 aa27.63■■■□□ 2.01
SBDSP1-205ENST00000456312 HSPA2P54652 639 aa27.62■■■□□ 2.01
SBDSP1-205ENST00000456312 PCGF6Q9BYE7 350 aa27.61■■■□□ 2.01
SBDSP1-205ENST00000456312 ANKRD30BQ9BXX2 1392 aa27.59■■■□□ 2.01
SBDSP1-205ENST00000456312 NEURL4Q96JN8 1562 aa27.58■■■□□ 2.01
SBDSP1-205ENST00000456312 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
SBDSP1-205ENST00000456312 IFT172Q9UG01 1749 aa27.53■■■□□ 2
SBDSP1-205ENST00000456312 ZFYVE9O95405 1425 aa27.52■■■□□ 2
SBDSP1-205ENST00000456312 THEMISQ8N1K5 641 aaPredicted RBP27.52■■■□□ 2
SBDSP1-205ENST00000456312 CCDC144AA2RUR9 1427 aa27.51■■□□□ 1.99
SBDSP1-205ENST00000456312 TMEM2Q9UHN6 1383 aa27.51■■□□□ 1.99
SBDSP1-205ENST00000456312 SPATA31E1Q6ZUB1 1445 aa27.5■■□□□ 1.99
SBDSP1-205ENST00000456312 PPLO60437 1756 aa27.5■■□□□ 1.99
SBDSP1-205ENST00000456312 NEXMIFQ5QGS0 1516 aa27.49■■□□□ 1.99
SBDSP1-205ENST00000456312 MED14O60244 1454 aa27.49■■□□□ 1.99
SBDSP1-205ENST00000456312 IQGAP1P46940 1657 aa27.46■■□□□ 1.99
SBDSP1-205ENST00000456312 SCAF11Q99590 1463 aaKnown RBP27.45■■□□□ 1.99
SBDSP1-205ENST00000456312 RIMS2Q9UQ26 1411 aa27.42■■□□□ 1.98
SBDSP1-205ENST00000456312 LTKP29376 864 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms