RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
AC007879.2-201ENST00000454444 ADGBQ8N7X0 1667 aa12.33□□□□□ -0.44
AC007879.2-201ENST00000454444 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
AC007879.2-201ENST00000454444 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
AC007879.2-201ENST00000454444 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
AC007879.2-201ENST00000454444 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
AC007879.2-201ENST00000454444 CAMSAP2Q08AD1 1489 aa12.32□□□□□ -0.44
AC007879.2-201ENST00000454444 TOM1O60784 492 aa12.3□□□□□ -0.44
AC007879.2-201ENST00000454444 MYO3AQ8NEV4 1616 aa12.29□□□□□ -0.44
AC007879.2-201ENST00000454444 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
AC007879.2-201ENST00000454444 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
AC007879.2-201ENST00000454444 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 KDM5DQ9BY66 1539 aa12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 SOCS7O14512 581 aa12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
AC007879.2-201ENST00000454444 PZPP20742 1482 aa12.27□□□□□ -0.44
AC007879.2-201ENST00000454444 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
AC007879.2-201ENST00000454444 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
AC007879.2-201ENST00000454444 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
AC007879.2-201ENST00000454444 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
AC007879.2-201ENST00000454444 NLRP1Q9C000 1473 aa12.25□□□□□ -0.45
AC007879.2-201ENST00000454444 DNMT1P26358 1616 aaKnown RBP12.24□□□□□ -0.45
AC007879.2-201ENST00000454444 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
AC007879.2-201ENST00000454444 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
AC007879.2-201ENST00000454444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
AC007879.2-201ENST00000454444 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
AC007879.2-201ENST00000454444 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
AC007879.2-201ENST00000454444 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
AC007879.2-201ENST00000454444 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
AC007879.2-201ENST00000454444 RRP7BPQ9NSQ0 103 aa12.22□□□□□ -0.45
AC007879.2-201ENST00000454444 CPS1P31327 1500 aa12.21□□□□□ -0.45
AC007879.2-201ENST00000454444 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
AC007879.2-201ENST00000454444 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
AC007879.2-201ENST00000454444 HSPA1LP34931 641 aa12.2□□□□□ -0.46
AC007879.2-201ENST00000454444 KANK1Q14678 1352 aa12.19□□□□□ -0.46
AC007879.2-201ENST00000454444 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
AC007879.2-201ENST00000454444 MAP3K1Q13233 1512 aa12.19□□□□□ -0.46
AC007879.2-201ENST00000454444 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
AC007879.2-201ENST00000454444 ABCC3O15438 1527 aa12.17□□□□□ -0.46
AC007879.2-201ENST00000454444 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
AC007879.2-201ENST00000454444 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
AC007879.2-201ENST00000454444 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
AC007879.2-201ENST00000454444 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
AC007879.2-201ENST00000454444 MED14O60244 1454 aa12.15□□□□□ -0.46
AC007879.2-201ENST00000454444 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
AC007879.2-201ENST00000454444 MAST1Q9Y2H9 1570 aa12.15□□□□□ -0.46
AC007879.2-201ENST00000454444 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
AC007879.2-201ENST00000454444 BCANQ96GW7 911 aa12.14□□□□□ -0.47
AC007879.2-201ENST00000454444 ANKRD30AQ9BXX3 1397 aa12.14□□□□□ -0.47
AC007879.2-201ENST00000454444 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
AC007879.2-201ENST00000454444 ERBINQ96RT1 1412 aa12.13□□□□□ -0.47
AC007879.2-201ENST00000454444 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
AC007879.2-201ENST00000454444 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
AC007879.2-201ENST00000454444 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
AC007879.2-201ENST00000454444 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
AC007879.2-201ENST00000454444 ABCC5O15440 1437 aa12.12□□□□□ -0.47
AC007879.2-201ENST00000454444 LTKP29376 864 aa12.12□□□□□ -0.47
AC007879.2-201ENST00000454444 SCAF11Q99590 1463 aaKnown RBP12.12□□□□□ -0.47
AC007879.2-201ENST00000454444 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
AC007879.2-201ENST00000454444 DAPK1P53355 1430 aa12.11□□□□□ -0.47
AC007879.2-201ENST00000454444 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
AC007879.2-201ENST00000454444 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
AC007879.2-201ENST00000454444 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
AC007879.2-201ENST00000454444 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
AC007879.2-201ENST00000454444 IDI1Q13907 227 aa12.09□□□□□ -0.47
AC007879.2-201ENST00000454444 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
AC007879.2-201ENST00000454444 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
AC007879.2-201ENST00000454444 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
AC007879.2-201ENST00000454444 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
AC007879.2-201ENST00000454444 SLC52A1Q9NWF4 448 aa12.08□□□□□ -0.48
AC007879.2-201ENST00000454444 PPP1R15AO75807 674 aaPredicted RBP12.07□□□□□ -0.48
AC007879.2-201ENST00000454444 PROSER2Q86WR7 435 aaPredicted RBP12.07□□□□□ -0.48
AC007879.2-201ENST00000454444 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
AC007879.2-201ENST00000454444 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
AC007879.2-201ENST00000454444 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
AC007879.2-201ENST00000454444 KCNA6P17658 529 aa12.05□□□□□ -0.48
AC007879.2-201ENST00000454444 CFAP65Q6ZU64 1925 aaKnown RBP12.05□□□□□ -0.48
AC007879.2-201ENST00000454444 CEP152O94986 1710 aa12.05□□□□□ -0.48
AC007879.2-201ENST00000454444 ARHGAP23Q9P227 1491 aa12.04□□□□□ -0.48
AC007879.2-201ENST00000454444 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
AC007879.2-201ENST00000454444 SLIT1O75093 1534 aa12.04□□□□□ -0.48
AC007879.2-201ENST00000454444 MED1Q15648 1581 aaPredicted RBP12.04□□□□□ -0.48
AC007879.2-201ENST00000454444 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
AC007879.2-201ENST00000454444 EFCAB6Q5THR3 1501 aa12.02□□□□□ -0.48
AC007879.2-201ENST00000454444 SYNMO15061 1565 aa12.02□□□□□ -0.49
AC007879.2-201ENST00000454444 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
AC007879.2-201ENST00000454444 ANKRD50Q9ULJ7 1429 aa12.02□□□□□ -0.49
AC007879.2-201ENST00000454444 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
AC007879.2-201ENST00000454444 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
AC007879.2-201ENST00000454444 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
AC007879.2-201ENST00000454444 LMTK2Q8IWU2 1503 aa12□□□□□ -0.49
AC007879.2-201ENST00000454444 MSH6P52701 1360 aa11.99□□□□□ -0.49
AC007879.2-201ENST00000454444 PIK3C2BO00750 1634 aa11.99□□□□□ -0.49
AC007879.2-201ENST00000454444 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
AC007879.2-201ENST00000454444 NOS1P29475 1434 aa11.98□□□□□ -0.49
AC007879.2-201ENST00000454444 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
AC007879.2-201ENST00000454444 ITGAEP38570 1179 aa11.98□□□□□ -0.49
AC007879.2-201ENST00000454444 ADGRL2O95490 1459 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms