RNA–Protein interactions for RNA: ENST00000454220.6

PPP2R1A-203, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 1 (best)

Gene PPP2R1A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-203ENST00000454220 MYO3AQ8NEV4 1616 aa23.71■■□□□ 1.39
PPP2R1A-203ENST00000454220 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
PPP2R1A-203ENST00000454220 NPATQ14207 1427 aa23.7■■□□□ 1.38
PPP2R1A-203ENST00000454220 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
PPP2R1A-203ENST00000454220 PTPRTO14522 1441 aa23.69■■□□□ 1.38
PPP2R1A-203ENST00000454220 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
PPP2R1A-203ENST00000454220 DHX29Q7Z478 1369 aaKnown RBP23.69■■□□□ 1.38
PPP2R1A-203ENST00000454220 CAMSAP1Q5T5Y3 1602 aa23.69■■□□□ 1.38
PPP2R1A-203ENST00000454220 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
PPP2R1A-203ENST00000454220 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
PPP2R1A-203ENST00000454220 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
PPP2R1A-203ENST00000454220 ZMYM3Q14202 1370 aa23.67■■□□□ 1.38
PPP2R1A-203ENST00000454220 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
PPP2R1A-203ENST00000454220 ITGAEP38570 1179 aa23.64■■□□□ 1.37
PPP2R1A-203ENST00000454220 KIF15Q9NS87 1388 aa23.64■■□□□ 1.37
PPP2R1A-203ENST00000454220 RRP7BPQ9NSQ0 103 aa23.63■■□□□ 1.37
PPP2R1A-203ENST00000454220 DUOX2Q9NRD8 1548 aa23.63■■□□□ 1.37
PPP2R1A-203ENST00000454220 ROCK1Q13464 1354 aa23.63■■□□□ 1.37
PPP2R1A-203ENST00000454220 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
PPP2R1A-203ENST00000454220 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
PPP2R1A-203ENST00000454220 GGT6Q6P531 493 aa23.6■■□□□ 1.37
PPP2R1A-203ENST00000454220 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
PPP2R1A-203ENST00000454220 KIF3BO15066 747 aa23.56■■□□□ 1.36
PPP2R1A-203ENST00000454220 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
PPP2R1A-203ENST00000454220 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
PPP2R1A-203ENST00000454220 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
PPP2R1A-203ENST00000454220 NCKAP5LQ9HCH0 1330 aa23.52■■□□□ 1.36
PPP2R1A-203ENST00000454220 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
PPP2R1A-203ENST00000454220 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
PPP2R1A-203ENST00000454220 KDM5DQ9BY66 1539 aa23.5■■□□□ 1.35
PPP2R1A-203ENST00000454220 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
PPP2R1A-203ENST00000454220 RNF17Q9BXT8 1623 aaKnown RBP23.49■■□□□ 1.35
PPP2R1A-203ENST00000454220 A2ML1A8K2U0 1454 aa23.48■■□□□ 1.35
PPP2R1A-203ENST00000454220 FAM135AQ9P2D6 1515 aa23.48■■□□□ 1.35
PPP2R1A-203ENST00000454220 PZPP20742 1482 aa23.44■■□□□ 1.34
PPP2R1A-203ENST00000454220 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
PPP2R1A-203ENST00000454220 ZNF335Q9H4Z2 1342 aaPredicted RBP23.44■■□□□ 1.34
PPP2R1A-203ENST00000454220 NAIPQ13075 1403 aa23.43■■□□□ 1.34
PPP2R1A-203ENST00000454220 DEPDC5O75140 1603 aa23.42■■□□□ 1.34
PPP2R1A-203ENST00000454220 PKD2Q13563 968 aa23.42■■□□□ 1.34
PPP2R1A-203ENST00000454220 TNRQ92752 1358 aa23.41■■□□□ 1.34
PPP2R1A-203ENST00000454220 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
PPP2R1A-203ENST00000454220 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
PPP2R1A-203ENST00000454220 SPATA31D1Q6ZQQ2 1576 aa23.4■■□□□ 1.34
PPP2R1A-203ENST00000454220 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
PPP2R1A-203ENST00000454220 WASHC2CQ9Y4E1 1318 aa23.4■■□□□ 1.34
PPP2R1A-203ENST00000454220 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
PPP2R1A-203ENST00000454220 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
PPP2R1A-203ENST00000454220 KANK1Q14678 1352 aa23.38■■□□□ 1.33
PPP2R1A-203ENST00000454220 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
PPP2R1A-203ENST00000454220 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
PPP2R1A-203ENST00000454220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.33
PPP2R1A-203ENST00000454220 CEP152O94986 1710 aa23.36■■□□□ 1.33
PPP2R1A-203ENST00000454220 ABCC3O15438 1527 aa23.34■■□□□ 1.33
PPP2R1A-203ENST00000454220 UNC13BO14795 1591 aa23.34■■□□□ 1.33
PPP2R1A-203ENST00000454220 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
PPP2R1A-203ENST00000454220 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.33
PPP2R1A-203ENST00000454220 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
PPP2R1A-203ENST00000454220 LMTK2Q8IWU2 1503 aa23.3■■□□□ 1.32
PPP2R1A-203ENST00000454220 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
PPP2R1A-203ENST00000454220 SETD5Q9C0A6 1442 aa23.3■■□□□ 1.32
PPP2R1A-203ENST00000454220 UGGT1Q9NYU2 1555 aa23.3■■□□□ 1.32
PPP2R1A-203ENST00000454220 UBAP1LF5GYI3 381 aa23.28■■□□□ 1.32
PPP2R1A-203ENST00000454220 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
PPP2R1A-203ENST00000454220 NUP155O75694 1391 aa23.27■■□□□ 1.32
PPP2R1A-203ENST00000454220 ILDR2Q71H61 639 aa23.27■■□□□ 1.32
PPP2R1A-203ENST00000454220 ARHGAP31Q2M1Z3 1444 aa23.26■■□□□ 1.31
PPP2R1A-203ENST00000454220 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
PPP2R1A-203ENST00000454220 ERVK-7P63135 1459 aa23.25■■□□□ 1.31
PPP2R1A-203ENST00000454220 IQGAP3Q86VI3 1631 aa23.25■■□□□ 1.31
PPP2R1A-203ENST00000454220 CPS1P31327 1500 aa23.24■■□□□ 1.31
PPP2R1A-203ENST00000454220 TET3O43151 1660 aa23.22■■□□□ 1.31
PPP2R1A-203ENST00000454220 UBR1Q8IWV7 1749 aa23.22■■□□□ 1.31
PPP2R1A-203ENST00000454220 HRCP23327 699 aa23.21■■□□□ 1.31
PPP2R1A-203ENST00000454220 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
PPP2R1A-203ENST00000454220 STRCP1A6NGW2 1772 aa23.2■■□□□ 1.3
PPP2R1A-203ENST00000454220 EFCAB6Q5THR3 1501 aa23.2■■□□□ 1.3
PPP2R1A-203ENST00000454220 MED14O60244 1454 aa23.2■■□□□ 1.3
PPP2R1A-203ENST00000454220 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
PPP2R1A-203ENST00000454220 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
PPP2R1A-203ENST00000454220 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
PPP2R1A-203ENST00000454220 THEMISQ8N1K5 641 aaPredicted RBP23.19■■□□□ 1.3
PPP2R1A-203ENST00000454220 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
PPP2R1A-203ENST00000454220 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
PPP2R1A-203ENST00000454220 SYNMO15061 1565 aa23.12■■□□□ 1.29
PPP2R1A-203ENST00000454220 E9PCH4 1651 aa23.12■■□□□ 1.29
PPP2R1A-203ENST00000454220 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
PPP2R1A-203ENST00000454220 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
PPP2R1A-203ENST00000454220 NOS1P29475 1434 aa23.09■■□□□ 1.29
PPP2R1A-203ENST00000454220 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
PPP2R1A-203ENST00000454220 SOCS7O14512 581 aa23.09■■□□□ 1.29
PPP2R1A-203ENST00000454220 PIP4K2BP78356 416 aa23.09■■□□□ 1.29
PPP2R1A-203ENST00000454220 SCAF11Q99590 1463 aaKnown RBP23.07■■□□□ 1.28
PPP2R1A-203ENST00000454220 MPHOSPH9Q99550 1183 aa23.07■■□□□ 1.28
PPP2R1A-203ENST00000454220 MED1Q15648 1581 aaPredicted RBP23.06■■□□□ 1.28
PPP2R1A-203ENST00000454220 SLIT1O75093 1534 aa23.06■■□□□ 1.28
PPP2R1A-203ENST00000454220 TOM1O60784 492 aa23.05■■□□□ 1.28
PPP2R1A-203ENST00000454220 HSPA1LP34931 641 aa23.05■■□□□ 1.28
PPP2R1A-203ENST00000454220 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
PPP2R1A-203ENST00000454220 LRRC7Q96NW7 1537 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms