RNA–Protein interactions for RNA: ENST00000454207.2

AL049844.3-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049844.3, Length 1,496 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049844.3-201ENST00000454207 ZNF777Q9ULD5 760 aaPredicted RBP12.88□□□□□ -0.35
AL049844.3-201ENST00000454207 FAM135AQ9P2D6 1515 aa12.87□□□□□ -0.35
AL049844.3-201ENST00000454207 CFDP1Q9UEE9 299 aaPredicted RBP12.87□□□□□ -0.35
AL049844.3-201ENST00000454207 CPS1P31327 1500 aa12.86□□□□□ -0.35
AL049844.3-201ENST00000454207 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
AL049844.3-201ENST00000454207 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
AL049844.3-201ENST00000454207 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
AL049844.3-201ENST00000454207 GGT6Q6P531 493 aa12.85□□□□□ -0.35
AL049844.3-201ENST00000454207 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
AL049844.3-201ENST00000454207 TOM1O60784 492 aa12.83□□□□□ -0.36
AL049844.3-201ENST00000454207 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
AL049844.3-201ENST00000454207 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
AL049844.3-201ENST00000454207 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 PZPP20742 1482 aa12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
AL049844.3-201ENST00000454207 TNRQ92752 1358 aa12.8□□□□□ -0.36
AL049844.3-201ENST00000454207 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
AL049844.3-201ENST00000454207 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
AL049844.3-201ENST00000454207 HSPA1LP34931 641 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 POTEHQ6S545 545 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 DEPDC5O75140 1603 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 MED14O60244 1454 aa12.78□□□□□ -0.36
AL049844.3-201ENST00000454207 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
AL049844.3-201ENST00000454207 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
AL049844.3-201ENST00000454207 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
AL049844.3-201ENST00000454207 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.37
AL049844.3-201ENST00000454207 VWDEQ8N2E2 1590 aa12.76□□□□□ -0.37
AL049844.3-201ENST00000454207 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
AL049844.3-201ENST00000454207 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
AL049844.3-201ENST00000454207 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
AL049844.3-201ENST00000454207 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
AL049844.3-201ENST00000454207 KIF3BO15066 747 aa12.74□□□□□ -0.37
AL049844.3-201ENST00000454207 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
AL049844.3-201ENST00000454207 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
AL049844.3-201ENST00000454207 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
AL049844.3-201ENST00000454207 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
AL049844.3-201ENST00000454207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
AL049844.3-201ENST00000454207 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
AL049844.3-201ENST00000454207 ALKQ9UM73 1620 aa12.72□□□□□ -0.37
AL049844.3-201ENST00000454207 SYNMO15061 1565 aa12.71□□□□□ -0.37
AL049844.3-201ENST00000454207 IQGAP1P46940 1657 aa12.71□□□□□ -0.38
AL049844.3-201ENST00000454207 ARHGEF5Q12774 1597 aa12.7□□□□□ -0.38
AL049844.3-201ENST00000454207 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
AL049844.3-201ENST00000454207 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
AL049844.3-201ENST00000454207 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
AL049844.3-201ENST00000454207 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
AL049844.3-201ENST00000454207 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
AL049844.3-201ENST00000454207 NCOA2Q15596 1464 aa12.67□□□□□ -0.38
AL049844.3-201ENST00000454207 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
AL049844.3-201ENST00000454207 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
AL049844.3-201ENST00000454207 EIF2AK4Q9P2K8 1649 aaKnown RBP12.66□□□□□ -0.38
AL049844.3-201ENST00000454207 ABCC3O15438 1527 aa12.65□□□□□ -0.38
AL049844.3-201ENST00000454207 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
AL049844.3-201ENST00000454207 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
AL049844.3-201ENST00000454207 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
AL049844.3-201ENST00000454207 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
AL049844.3-201ENST00000454207 ARHGAP23Q9P227 1491 aa12.61□□□□□ -0.39
AL049844.3-201ENST00000454207 UBR1Q8IWV7 1749 aa12.61□□□□□ -0.39
AL049844.3-201ENST00000454207 SLIT1O75093 1534 aa12.61□□□□□ -0.39
AL049844.3-201ENST00000454207 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
AL049844.3-201ENST00000454207 KCNA4P22459 653 aa12.59□□□□□ -0.39
AL049844.3-201ENST00000454207 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
AL049844.3-201ENST00000454207 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
AL049844.3-201ENST00000454207 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
AL049844.3-201ENST00000454207 DUOX2Q9NRD8 1548 aa12.57□□□□□ -0.4
AL049844.3-201ENST00000454207 CEP152O94986 1710 aa12.56□□□□□ -0.4
AL049844.3-201ENST00000454207 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
AL049844.3-201ENST00000454207 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 LRRC9Q6ZRR7 1453 aa12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 TXNDC2Q86VQ3 553 aa12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
AL049844.3-201ENST00000454207 LTKP29376 864 aa12.54□□□□□ -0.4
AL049844.3-201ENST00000454207 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
AL049844.3-201ENST00000454207 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
AL049844.3-201ENST00000454207 ERBINQ96RT1 1412 aa12.53□□□□□ -0.4
AL049844.3-201ENST00000454207 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
AL049844.3-201ENST00000454207 PIK3C2BO00750 1634 aa12.5□□□□□ -0.41
AL049844.3-201ENST00000454207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■■□□ 14.7
AL049844.3-201ENST00000454207 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
AL049844.3-201ENST00000454207 CFAP65Q6ZU64 1925 aaKnown RBP12.5□□□□□ -0.41
AL049844.3-201ENST00000454207 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
AL049844.3-201ENST00000454207 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
AL049844.3-201ENST00000454207 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
AL049844.3-201ENST00000454207 KCNA6P17658 529 aa12.49□□□□□ -0.41
AL049844.3-201ENST00000454207 LMTK2Q8IWU2 1503 aa12.49□□□□□ -0.41
AL049844.3-201ENST00000454207 TMEM94Q12767 1356 aa12.49□□□□□ -0.41
AL049844.3-201ENST00000454207 KANK1Q14678 1352 aa12.48□□□□□ -0.41
AL049844.3-201ENST00000454207 NWD1Q149M9 1564 aa12.48□□□□□ -0.41
AL049844.3-201ENST00000454207 CROCC2H7BZ55 1655 aa12.48□□□□□ -0.41
AL049844.3-201ENST00000454207 TET3O43151 1660 aa12.48□□□□□ -0.41
AL049844.3-201ENST00000454207 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
AL049844.3-201ENST00000454207 POTEAQ6S8J7 498 aa12.46□□□□□ -0.41
AL049844.3-201ENST00000454207 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms