RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 MROH1Q8NDA8 1641 aa22.52■■□□□ 1.2
VPS16-205ENST00000453689 ADGRL2O95490 1459 aa22.52■■□□□ 1.2
VPS16-205ENST00000453689 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
VPS16-205ENST00000453689 CEP152O94986 1710 aa22.51■■□□□ 1.19
VPS16-205ENST00000453689 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
VPS16-205ENST00000453689 ZC3H13Q5T200 1668 aaKnown RBP22.51■■□□□ 1.19
VPS16-205ENST00000453689 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
VPS16-205ENST00000453689 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
VPS16-205ENST00000453689 NCOA1Q15788 1441 aa22.49■■□□□ 1.19
VPS16-205ENST00000453689 RRP7BPQ9NSQ0 103 aa22.49■■□□□ 1.19
VPS16-205ENST00000453689 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
VPS16-205ENST00000453689 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
VPS16-205ENST00000453689 ERBINQ96RT1 1412 aa22.48■■□□□ 1.19
VPS16-205ENST00000453689 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.47■■□□□ 1.19
VPS16-205ENST00000453689 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
VPS16-205ENST00000453689 RRBP1Q9P2E9 1410 aaKnown RBP22.45■■□□□ 1.18
VPS16-205ENST00000453689 PRDM15P57071 1507 aaPredicted RBP22.45■■□□□ 1.18
VPS16-205ENST00000453689 CFAP65Q6ZU64 1925 aaKnown RBP22.45■■□□□ 1.18
VPS16-205ENST00000453689 CAMSAP1Q5T5Y3 1602 aa22.42■■□□□ 1.18
VPS16-205ENST00000453689 ABCC3O15438 1527 aa22.42■■□□□ 1.18
VPS16-205ENST00000453689 NPATQ14207 1427 aa22.42■■□□□ 1.18
VPS16-205ENST00000453689 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
VPS16-205ENST00000453689 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
VPS16-205ENST00000453689 WASHC2CQ9Y4E1 1318 aa22.4■■□□□ 1.18
VPS16-205ENST00000453689 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.18
VPS16-205ENST00000453689 PZPP20742 1482 aa22.38■■□□□ 1.17
VPS16-205ENST00000453689 ITGAEP38570 1179 aa22.37■■□□□ 1.17
VPS16-205ENST00000453689 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
VPS16-205ENST00000453689 HSPA2P54652 639 aa22.36■■□□□ 1.17
VPS16-205ENST00000453689 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
VPS16-205ENST00000453689 ANKRD50Q9ULJ7 1429 aa22.35■■□□□ 1.17
VPS16-205ENST00000453689 STRCQ7RTU9 1775 aa22.34■■□□□ 1.17
VPS16-205ENST00000453689 UNC13BO14795 1591 aa22.32■■□□□ 1.16
VPS16-205ENST00000453689 CEP170BQ9Y4F5 1589 aaPredicted RBP22.32■■□□□ 1.16
VPS16-205ENST00000453689 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
VPS16-205ENST00000453689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.3■■□□□ 1.16
VPS16-205ENST00000453689 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
VPS16-205ENST00000453689 KANK1Q14678 1352 aa22.29■■□□□ 1.16
VPS16-205ENST00000453689 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
VPS16-205ENST00000453689 LMTK2Q8IWU2 1503 aa22.29■■□□□ 1.16
VPS16-205ENST00000453689 TNRQ92752 1358 aa22.26■■□□□ 1.15
VPS16-205ENST00000453689 ERVK-7P63135 1459 aa22.26■■□□□ 1.15
VPS16-205ENST00000453689 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
VPS16-205ENST00000453689 TET3O43151 1660 aa22.25■■□□□ 1.15
VPS16-205ENST00000453689 EFCAB6Q5THR3 1501 aa22.25■■□□□ 1.15
VPS16-205ENST00000453689 A2ML1A8K2U0 1454 aa22.24■■□□□ 1.15
VPS16-205ENST00000453689 IQGAP3Q86VI3 1631 aa22.24■■□□□ 1.15
VPS16-205ENST00000453689 NLRP1Q9C000 1473 aa22.2■■□□□ 1.14
VPS16-205ENST00000453689 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
VPS16-205ENST00000453689 E9PCH4 1651 aa22.19■■□□□ 1.14
VPS16-205ENST00000453689 UBR1Q8IWV7 1749 aa22.18■■□□□ 1.14
VPS16-205ENST00000453689 NAIPQ13075 1403 aa22.18■■□□□ 1.14
VPS16-205ENST00000453689 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
VPS16-205ENST00000453689 SYNMO15061 1565 aa22.16■■□□□ 1.14
VPS16-205ENST00000453689 PLA2R1Q13018 1463 aa22.15■■□□□ 1.14
VPS16-205ENST00000453689 HFM1A2PYH4 1435 aa22.14■■□□□ 1.14
VPS16-205ENST00000453689 PIK3C2BO00750 1634 aa22.14■■□□□ 1.14
VPS16-205ENST00000453689 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
VPS16-205ENST00000453689 KDM5AP29375 1690 aaKnown RBP22.11■■□□□ 1.13
VPS16-205ENST00000453689 MYO5BQ9ULV0 1848 aa22.11■■□□□ 1.13
VPS16-205ENST00000453689 NUP155O75694 1391 aa22.11■■□□□ 1.13
VPS16-205ENST00000453689 NOS1P29475 1434 aa22.1■■□□□ 1.13
VPS16-205ENST00000453689 PTPRTO14522 1441 aa22.09■■□□□ 1.13
VPS16-205ENST00000453689 NEURL4Q96JN8 1562 aa22.08■■□□□ 1.12
VPS16-205ENST00000453689 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
VPS16-205ENST00000453689 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
VPS16-205ENST00000453689 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
VPS16-205ENST00000453689 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
VPS16-205ENST00000453689 PKD2Q13563 968 aa22.04■■□□□ 1.12
VPS16-205ENST00000453689 ADGRB3O60242 1522 aa22.02■■□□□ 1.12
VPS16-205ENST00000453689 IQGAP1P46940 1657 aa22.01■■□□□ 1.11
VPS16-205ENST00000453689 IDI1Q13907 227 aa22■■□□□ 1.11
VPS16-205ENST00000453689 SLIT1O75093 1534 aa22■■□□□ 1.11
VPS16-205ENST00000453689 TMEM131LA2VDJ0 1609 aa21.98■■□□□ 1.11
VPS16-205ENST00000453689 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
VPS16-205ENST00000453689 MED14O60244 1454 aa21.96■■□□□ 1.11
VPS16-205ENST00000453689 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
VPS16-205ENST00000453689 SLC52A1Q9NWF4 448 aa21.96■■□□□ 1.11
VPS16-205ENST00000453689 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
VPS16-205ENST00000453689 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
VPS16-205ENST00000453689 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
VPS16-205ENST00000453689 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
VPS16-205ENST00000453689 KIF1BO60333 1816 aa21.92■■□□□ 1.1
VPS16-205ENST00000453689 NPHP4O75161 1426 aaPredicted RBP21.92■■□□□ 1.1
VPS16-205ENST00000453689 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
VPS16-205ENST00000453689 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
VPS16-205ENST00000453689 TMEM2Q9UHN6 1383 aa21.91■■□□□ 1.1
VPS16-205ENST00000453689 TRPM2O94759 1503 aa21.9■■□□□ 1.1
VPS16-205ENST00000453689 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
VPS16-205ENST00000453689 LTKP29376 864 aa21.88■■□□□ 1.09
VPS16-205ENST00000453689 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
VPS16-205ENST00000453689 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
VPS16-205ENST00000453689 ZNF335Q9H4Z2 1342 aaPredicted RBP21.86■■□□□ 1.09
VPS16-205ENST00000453689 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
VPS16-205ENST00000453689 CERKQ8TCT0 537 aa21.85■■□□□ 1.09
VPS16-205ENST00000453689 EID1Q9Y6B2 187 aa21.85■■□□□ 1.09
VPS16-205ENST00000453689 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
VPS16-205ENST00000453689 ZFYVE9O95405 1425 aa21.84■■□□□ 1.09
VPS16-205ENST00000453689 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
VPS16-205ENST00000453689 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms