RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 HFM1A2PYH4 1435 aa23.65■■□□□ 1.38
RBM39-219ENST00000453310 NAIPQ13075 1403 aa23.65■■□□□ 1.38
RBM39-219ENST00000453310 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
RBM39-219ENST00000453310 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
RBM39-219ENST00000453310 PRDM15P57071 1507 aaPredicted RBP23.62■■□□□ 1.37
RBM39-219ENST00000453310 FAM135AQ9P2D6 1515 aa23.6■■□□□ 1.37
RBM39-219ENST00000453310 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
RBM39-219ENST00000453310 CLTCQ00610 1675 aaKnown RBP23.6■■□□□ 1.37
RBM39-219ENST00000453310 CNTLNQ9NXG0 1405 aa23.59■■□□□ 1.37
RBM39-219ENST00000453310 KDM5DQ9BY66 1539 aa23.59■■□□□ 1.37
RBM39-219ENST00000453310 ESF1Q9H501 851 aaKnown RBP23.59■■□□□ 1.37
RBM39-219ENST00000453310 UNC13BO14795 1591 aa23.57■■□□□ 1.36
RBM39-219ENST00000453310 PTPRMP28827 1452 aa23.57■■□□□ 1.36
RBM39-219ENST00000453310 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
RBM39-219ENST00000453310 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
RBM39-219ENST00000453310 ABCC3O15438 1527 aa23.55■■□□□ 1.36
RBM39-219ENST00000453310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.363e-41■□□□□ 10.6
RBM39-219ENST00000453310 CEP152O94986 1710 aa23.54■■□□□ 1.36
RBM39-219ENST00000453310 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
RBM39-219ENST00000453310 KANK1Q14678 1352 aa23.53■■□□□ 1.36
RBM39-219ENST00000453310 VWDEQ8N2E2 1590 aa23.53■■□□□ 1.36
RBM39-219ENST00000453310 C3P01024 1663 aa23.52■■□□□ 1.36
RBM39-219ENST00000453310 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
RBM39-219ENST00000453310 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
RBM39-219ENST00000453310 ZMYM3Q14202 1370 aa23.49■■□□□ 1.35
RBM39-219ENST00000453310 CAMSAP1Q5T5Y3 1602 aa23.48■■□□□ 1.35
RBM39-219ENST00000453310 LMTK2Q8IWU2 1503 aa23.48■■□□□ 1.35
RBM39-219ENST00000453310 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
RBM39-219ENST00000453310 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
RBM39-219ENST00000453310 NUP155O75694 1391 aa23.45■■□□□ 1.34
RBM39-219ENST00000453310 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
RBM39-219ENST00000453310 PZPP20742 1482 aa23.43■■□□□ 1.34
RBM39-219ENST00000453310 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
RBM39-219ENST00000453310 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
RBM39-219ENST00000453310 TET3O43151 1660 aa23.42■■□□□ 1.34
RBM39-219ENST00000453310 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
RBM39-219ENST00000453310 ARHGAP31Q2M1Z3 1444 aa23.4■■□□□ 1.34
RBM39-219ENST00000453310 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
RBM39-219ENST00000453310 NPATQ14207 1427 aa23.39■■□□□ 1.33
RBM39-219ENST00000453310 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
RBM39-219ENST00000453310 ERVK-7P63135 1459 aa23.35■■□□□ 1.33
RBM39-219ENST00000453310 PREX1Q8TCU6 1659 aa23.35■■□□□ 1.33
RBM39-219ENST00000453310 FBXO31Q5XUX0 539 aaPredicted RBP23.34■■□□□ 1.33
RBM39-219ENST00000453310 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
RBM39-219ENST00000453310 SPATA31D1Q6ZQQ2 1576 aa23.34■■□□□ 1.33
RBM39-219ENST00000453310 E9PCH4 1651 aa23.34■■□□□ 1.33
RBM39-219ENST00000453310 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.33
RBM39-219ENST00000453310 SETD1BQ9UPS6 1966 aaKnown RBP23.32■■□□□ 1.32
RBM39-219ENST00000453310 HRCP23327 699 aa23.31■■□□□ 1.32
RBM39-219ENST00000453310 TNRQ92752 1358 aa23.3■■□□□ 1.32
RBM39-219ENST00000453310 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
RBM39-219ENST00000453310 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
RBM39-219ENST00000453310 NOS1P29475 1434 aa23.27■■□□□ 1.32
RBM39-219ENST00000453310 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
RBM39-219ENST00000453310 SYNMO15061 1565 aa23.25■■□□□ 1.31
RBM39-219ENST00000453310 LMTK3Q96Q04 1460 aa23.24■■□□□ 1.31
RBM39-219ENST00000453310 PKD2Q13563 968 aa23.24■■□□□ 1.31
RBM39-219ENST00000453310 MPHOSPH9Q99550 1183 aa23.24■■□□□ 1.31
RBM39-219ENST00000453310 ZNF142P52746 1687 aaPredicted RBP23.23■■□□□ 1.31
RBM39-219ENST00000453310 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
RBM39-219ENST00000453310 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
RBM39-219ENST00000453310 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
RBM39-219ENST00000453310 CEP170BQ9Y4F5 1589 aaPredicted RBP23.22■■□□□ 1.31
RBM39-219ENST00000453310 A2ML1A8K2U0 1454 aa23.19■■□□□ 1.3
RBM39-219ENST00000453310 PTPRTO14522 1441 aa23.18■■□□□ 1.3
RBM39-219ENST00000453310 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
RBM39-219ENST00000453310 TRPM2O94759 1503 aa23.17■■□□□ 1.3
RBM39-219ENST00000453310 FOXD1Q16676 465 aa23.16■■□□□ 1.3
RBM39-219ENST00000453310 UGGT1Q9NYU2 1555 aa23.15■■□□□ 1.3
RBM39-219ENST00000453310 PLA2R1Q13018 1463 aa23.14■■□□□ 1.29
RBM39-219ENST00000453310 SLC52A1Q9NWF4 448 aa23.14■■□□□ 1.29
RBM39-219ENST00000453310 IDI1Q13907 227 aa23.13■■□□□ 1.29
RBM39-219ENST00000453310 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
RBM39-219ENST00000453310 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
RBM39-219ENST00000453310 KDM5AP29375 1690 aaKnown RBP23.1■■□□□ 1.29
RBM39-219ENST00000453310 ADGRB3O60242 1522 aa23.1■■□□□ 1.29
RBM39-219ENST00000453310 HSPA2P54652 639 aa23.1■■□□□ 1.29
RBM39-219ENST00000453310 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
RBM39-219ENST00000453310 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
RBM39-219ENST00000453310 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
RBM39-219ENST00000453310 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
RBM39-219ENST00000453310 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
RBM39-219ENST00000453310 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
RBM39-219ENST00000453310 ANKRD30BQ9BXX2 1392 aa23.02■■□□□ 1.28
RBM39-219ENST00000453310 KIF1BO60333 1816 aa23.02■■□□□ 1.28
RBM39-219ENST00000453310 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
RBM39-219ENST00000453310 SLIT1O75093 1534 aa23■■□□□ 1.27
RBM39-219ENST00000453310 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
RBM39-219ENST00000453310 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
RBM39-219ENST00000453310 TMEM2Q9UHN6 1383 aa22.98■■□□□ 1.27
RBM39-219ENST00000453310 POLR1AO95602 1720 aaPredicted RBP22.97■■□□□ 1.27
RBM39-219ENST00000453310 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
RBM39-219ENST00000453310 ANKLE2Q86XL3 938 aa22.93■■□□□ 1.26
RBM39-219ENST00000453310 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
RBM39-219ENST00000453310 SCAF11Q99590 1463 aaKnown RBP22.92■■□□□ 1.26
RBM39-219ENST00000453310 ZFYVE9O95405 1425 aa22.92■■□□□ 1.26
RBM39-219ENST00000453310 RIMS2Q9UQ26 1411 aa22.92■■□□□ 1.26
RBM39-219ENST00000453310 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
RBM39-219ENST00000453310 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
RBM39-219ENST00000453310 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms